Oenanthe melanoleuca (Eastern black-eared wheatear): 130266828
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Entry
130266828 CDS
T09236
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130266828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130266828
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130266828
U7-dependent histone pre-mRNA processing factors
130266828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
Beta-Casp
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
130266828
NCBI-ProteinID:
XP_056372073
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All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSVILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTLHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KYVVVMYTKTVAMK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactacgctctcgggggtgcaggaggaatctgccctttgc
tatctgttgcaagtagatgagtttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctgaggaagcatgttcaccaggttgatgctgttctgctt
tcccaccctgaccctctacaccttggtgcacttccatatgcagttggaaaaatggggttg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctaccagtcccgccataacactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaaattttctcagattgtgaacttaaaaggcaaa
ggacatggtttgtcaatcacaccattgccagctggtcacatgataggaggcacaatttgg
aagattgtcaaggatggggaggaagaaattgtttatgctgttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttaagcaggccttcattgcttattaca
gattcatttaatgctacttatgtacaacccaggaggaagcaaagggatgaacagctgctg
actaatgttttggagacattacgaggtgatggaaatgtattaatagccgtggatactgca
ggcagagttctggaacttgctcagcttcttgatcagatctggagaacaaaagatgcagga
ttaggagtctactctctcgcacttttgaataatgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaggacaagagaaac
aacccttttcagttccgccatctctccttatgtcacagtctttctgatctggctcgagtg
cctagtccaaaggttgttcttgccagtcagcctgacttggaatgtgggttttctagagac
cttttcattcaatggtgccaggattccaaaaactctgtaattttaacttaccgcactaca
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaaattggaaggaaaagaacttgaagagtacctagaaaaggagaaa
ctaaagaaagaggcagctaagaagttagagcagtctaaagaggcagatattgattccagt
gatgagagtgatgctgaagaggatattgatcagccgactttgcataagactaaacatgat
ttgatgatgaaaggtgaaggtagccggaaaggaagcttcttcaaacaggcgaaaaaatct
tatccaatgtttccagctcctgaagaaagaattaaatgggatgaatatggtgaaattatc
aagtatgtggtggtaatgtatactaaaacagtagcaatgaaataa
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