Onychostoma macrolepis: 131520307
Help
Entry
131520307 CDS
T09350
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
omc
Onychostoma macrolepis
Pathway
omc03030
DNA replication
omc03420
Nucleotide excision repair
omc03430
Mismatch repair
omc03440
Homologous recombination
omc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131520307 (rpa1)
03420 Nucleotide excision repair
131520307 (rpa1)
03430 Mismatch repair
131520307 (rpa1)
03440 Homologous recombination
131520307 (rpa1)
03460 Fanconi anemia pathway
131520307 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131520307 (rpa1)
03032 DNA replication proteins [BR:
omc03032
]
131520307 (rpa1)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131520307 (rpa1)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131520307 (rpa1)
DNA replication proteins [BR:
omc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131520307 (rpa1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131520307 (rpa1)
MMR (mismatch excision repair)
131520307 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
131520307 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
131520307
NCBI-ProteinID:
XP_058600404
LinkDB
All DBs
Position
15:complement(17598529..17635460)
Genome browser
AA seq
603 aa
AA seq
DB search
MTVRLSEGAIESLTKGIEVSNPVLQCVNIRKIDGGNGLSRFRLMMSDGLHTMSSFMLSTQ
LNPMAEQNQLASNCVCMLKRNVTNVLKDGRRVVVILDMDVIKSADQMAGKIGDPTPYVEG
QSKPQQNAAPAPTARPLQSQNGSDGSMNRPSAQSFGKKPMAAPNTPGGSSKVVPIASLNP
YQSKWTVRARVTNKGAIRTWSNSRGDGKLFSMELVDESGEIRATGFNNEVDKFYSLIEQG
KVYYISKGTLKIANKQFSSLKNDYEMTLNGETTISPCEDSHDVPMVQCDFVSIADLESRE
KDTIIDVIGVCKNTEDVTRIMTKNSREVSKRNIQLMDMSGRIIQLTMWGNDAETFDGSGQ
PILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHAMDGQSMTELRGP
GGGGGNTNWKTLAEVKNEHLGHGDKADYFSCIATIVYIRKENCLYQACPSKDCNKKVVDQ
QNGMYRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDSAETLLGQNSGYLGQLKDS
NESAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVDHREYSKRLIINIRKL
AAQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcgactgtcagaaggggcgattgagtccctgacaaaaggaattgaagtcagc
aaccctgttttgcagtgtgtgaacattcgtaagattgatgggggaaatggcttgtcccgt
ttccgtctcatgatgagtgatgggctacacaccatgtcctcattcatgctctccacacag
ctcaatcccatggctgagcaaaaccagttggcctctaactgtgtgtgtatgctgaaaaga
aacgtcactaatgttctcaaagatgggcgacgtgtggtagttatattggacatggacgtg
atcaaatctgctgaccagatggcaggaaaaattggagacccaactccttatgtggagggc
cagtcaaagccacaacagaatgcagctccggctccaactgcacgtccactacagtctcag
aatggaagtgatggttcaatgaacagaccttctgctcagagcttcgggaaaaagcccatg
gctgcccctaacactcctggaggcagctctaaagtcgttcccattgccagcctcaatcca
taccagtcaaaatggactgttagagccagagtcaccaacaagggtgccatccgcacatgg
agtaactccagaggggatgggaagctcttctccatggagcttgtggatgaaagcggggag
atcagagcaactggatttaataatgaggtggacaaattctactccctcatcgagcaggga
aaggtctactacatctcaaaaggcaccctgaagattgccaacaaacaattctcttcgctt
aagaatgactatgagatgactttaaacggtgagacaaccatcagcccttgcgaagacagc
catgatgtccccatggtgcagtgcgactttgtttccattgctgacctggagtcccgggag
aaagacaccatcatagatgtgattggagtgtgtaaaaacacagaggatgtgacgcgcatc
atgaccaagaacagtcgtgaggtttcaaagaggaacatccaactgatggacatgtctggc
agaatcatccagctcaccatgtggggtaatgatgcagagacgtttgatggcagtgggcag
cctatcttggccattaagggagcaagattgtctgactttggtgggcgttctctctccact
ctctacagcagcacggtcatgatcaaccctgacattcccgaggcatataaactgcgggga
tggtatgataaggaaggacatgctatggatggacagtcgatgactgagttgagaggacct
ggtggtggtggtggaaacacaaactggaagaccctggcggaagtcaagaatgagcactta
ggacatggagacaaagctgattatttctcttgcatcgccacaatagtctacatccgtaaa
gagaactgcttgtatcaggcttgtcccagtaaagactgcaacaagaaggtggtggaccag
cagaatggcatgtaccgctgtgagaaatgcgacaaagagttccccgacttcaaatatcgt
ctcatgctctcggccaacattgctgattttggagacaaccaatgggtgacttgctttcag
gacagtgctgagaccctcctgggccaaaactcaggttatctcggccaactcaaggactcg
aacgaatctgcatttgatgaggtctttcagcatgcaaacttcaatacttttgtcttccgg
aacagagtgaagctggagacctacaatgacgaatcgcgcattaaagtgacagtggtggac
gcgaagccagttgaccacagagaatacagcaaacggctgatcatcaacataaggaagttg
gcggcacagtag
DBGET
integrated database retrieval system
