Onychostoma macrolepis: 131520409
Help
Entry
131520409 CDS
T09350
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131520409 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131520409 (scarf1)
Membrane trafficking [BR:
omc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
131520409 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
131520409
NCBI-ProteinID:
XP_058600610
LinkDB
All DBs
Position
15:complement(18661146..18670893)
Genome browser
AA seq
891 aa
AA seq
DB search
MDTFLTSFGLMLMCVQCSAQRLSPTGKNICLSVREYSPICCSGWGQNGDECTVPLCEGER
ACLQDEVCVYPGLCRCKPGFYGYQCKTPCPPEFWGPDCRELCPCHPHGLCDPVTGECSCL
PNRWGSLCQNSCKCGRHGKCDPVYGNCTCEEGWWTSTCSKACQCHHATSTCDQATGRCLC
DKGYWGQKCSLPCNCYVSPCQQRTGACLCLHGWWGPSCDRRCICDLSHADCDVQTGTCLC
YPGYKEPFCNEPCDSGKYGRGCMRSCGHCEGGRSCSKHDGLCDACAPGWNGTHCDQPCPA
GYYGHRCQEVCPRCRNMDPCDTETGACSHCDPGWTGPRCDQPCTDGTYGDGCRFLCKTCH
HGHCDHVTGSCICLPGFQGESCNSTCPPNLYGINCSSTCDCGNHACHPATGACSNSSRTG
LLAGLLIPLCILILALLFCCCCCGRPVEGKEGVAVGDGSPAVRMKHHVYTVLANMGSAMP
CITLWSSGLPRVTVSHHDPELTFNHSFIEQPSSGWVTDSFETDDEGEVVYCEPPREDVLT
VAGGELQELSSKCNFFPDPSTFSSDDMSQDFGIPRTSSIAKSNRPSVSFAEGTKFSPKER
RSSTQDLPGTSRKPKAWGVLMISALQGGQGNHSETEKEEKNNEETISSEEQAAESETPQT
DSERYSSGPLRTHLTVPSGRRRTLSNTRKNAQPSDSGQDADSEKLTTVYVTVGKTQKMAK
QEPPSEGPVQAMLRRLGSLQRQREEATQPKGRGQAIAKPPRRKLGERASAWEQATGSNQS
EVVMRKPSRRKHNSLSSPCTVGATDFPQENCTPKRPLSSILKSVPESDTLHSLEVEQDTE
VVYETDTLTEHTYETVAPSDRVSTSSEIIINETVVDQAENEPNYENVYVKH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggacacctttctgacctcatttggactgatgctcatgtgtgtccaatgctcagctcag
agactgtctccgaccgggaaaaacatctgcctcagtgtcagggaatattctcccatatgt
tgttctggatggggacagaacggtgacgaatgcactgtccctctctgtgagggagaaagg
gcctgtctgcaggatgaagtgtgtgtttatcctggactttgtcgatgtaaacctggattt
tacgggtaccagtgcaaaaccccttgtcctcctgagttttgggggccggattgtcgagag
ctctgtccctgtcaccctcatgggctctgtgacccagtcactggtgagtgctcgtgcctg
cccaaccgctggggcagcttgtgccagaacagctgcaaatgtggacgtcatgggaaatgt
gatcctgtctatggcaactgcacctgtgaggagggctggtggacgtccacttgctccaaa
gcctgtcagtgccaccatgctacatccacttgtgaccaagccacgggacgctgcctgtgt
gacaaaggctactggggccaaaagtgcagcctgccatgcaactgctatgtgtccccttgc
cagcagcgcacaggggcctgtctttgtttgcatggctggtggggtccgtcctgtgatcgc
cgttgcatttgtgatctcagccatgccgactgtgacgtgcaaactggcacctgtctgtgc
tacccgggttacaaagagcctttttgcaatgagccttgtgacagtggaaagtatggcaga
ggctgtatgagaagctgtggacactgtgaaggaggcaggtcttgctctaaacatgacggc
ctgtgtgatgcctgtgcaccagggtggaatggcactcactgtgaccagccgtgtcctgca
ggttattatggccaccgctgccaagaggtttgtccgcgttgcagaaatatggacccatgt
gacacggaaaccggagcgtgctcacactgtgatcctggttggactggaccgagatgtgac
caaccctgcacagatggtacatacggagatggctgtcgtttcctgtgtaagacctgccat
catggtcactgtgatcatgtgacaggaagttgcatttgtcttcctggcttccagggcgag
agctgtaatagcacatgtcctcctaacctgtatggcatcaactgctcctccacatgtgac
tgtgggaatcatgcctgccatcctgccacaggagcttgttcaaacagtagcaggacaggt
ctcttagcagggcttttgattcccttgtgcattttaatactcgccttgttgttctgctgc
tgctgttgtgggcggcccgtcgaagggaaagaaggagtggcggttggagatggcagtcct
gcggttcgcatgaagcatcatgtttatactgtgctggccaacatgggttcagcaatgccg
tgcattactctttggtcatctggtttgcctagggttacagtctctcatcatgatcctgag
ctcacatttaaccacagcttcattgagcagccatcgtccggctgggtgacggattcattt
gaaactgatgatgaaggagaggtcgtctactgtgaaccacccagggaagatgttcttact
gtggccggtggagagcttcaagagctgagctcaaagtgtaacttcttccctgacccatca
accttcagcagtgacgacatgtcacaggattttggtatccctcgtacctccagcattgcc
aaatccaatcgtccttcagtctcattcgcagagggcacaaagttcagtcctaaagagcgc
cgtagctcaactcaagacctgccaggaacaagtcggaaacccaaagcctggggcgttctg
atgatctctgccctgcaaggaggacagggaaaccacagtgaaacagaaaaagaagagaaa
aacaacgaggagaccatctcctctgaggagcaagcagctgaatctgaaacaccacaaact
gactcggaaagatacagttctggcccactaaggactcacctcactgtgcccagtgggaga
cgacgtacactttccaataccaggaagaatgcccaaccgtctgatagcggccaggatgca
gattcagagaagttaacaacggtatatgtcactgtgggcaagacccaaaagatggccaag
caagagcccccctcagaagggcctgttcaggcaatgctgcgcagattgggcagtctacag
agacaaagagaggaggccacccagcccaaaggaagggggcaggcgatcgccaagccacca
cggaggaaactgggagaacgggccagtgcgtgggagcaagctactgggtcaaaccaatca
gaggtggtcatgaggaaacctagtcgcaggaaacacaactccctcagctctccctgcaca
gtgggggcaacagactttcctcaggagaactgcacccccaagaggccattgtcctccatt
ttaaaaagtgttccagagagtgatacgctccatagtttggaggtggaacaagacactgaa
gtagtttatgagacagacactctgacagagcacacttatgagactgtggctccgtctgat
agggtctccacgtcttcagagattattattaatgagacagttgtggaccaagcagaaaat
gagccaaattatgagaacgtttatgtaaagcattga
DBGET
integrated database retrieval system