KEGG   Onychostoma macrolepis: 131520409
Entry
131520409         CDS       T09350                                 
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
  KO
K24318  scavenger receptor class F member 1
Organism
omc  Onychostoma macrolepis
Pathway
omc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    131520409 (scarf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omc04131]
    131520409 (scarf1)
Membrane trafficking [BR:omc04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    131520409 (scarf1)
SSDB
Motif
Pfam: EGF_laminin EGF_TEN EGF_PEAR1L EGF_Teneurin EGF_2
Other DBs
NCBI-GeneID: 131520409
NCBI-ProteinID: XP_058600610
LinkDB
Position
15:complement(18661146..18670893)
AA seq 891 aa
MDTFLTSFGLMLMCVQCSAQRLSPTGKNICLSVREYSPICCSGWGQNGDECTVPLCEGER
ACLQDEVCVYPGLCRCKPGFYGYQCKTPCPPEFWGPDCRELCPCHPHGLCDPVTGECSCL
PNRWGSLCQNSCKCGRHGKCDPVYGNCTCEEGWWTSTCSKACQCHHATSTCDQATGRCLC
DKGYWGQKCSLPCNCYVSPCQQRTGACLCLHGWWGPSCDRRCICDLSHADCDVQTGTCLC
YPGYKEPFCNEPCDSGKYGRGCMRSCGHCEGGRSCSKHDGLCDACAPGWNGTHCDQPCPA
GYYGHRCQEVCPRCRNMDPCDTETGACSHCDPGWTGPRCDQPCTDGTYGDGCRFLCKTCH
HGHCDHVTGSCICLPGFQGESCNSTCPPNLYGINCSSTCDCGNHACHPATGACSNSSRTG
LLAGLLIPLCILILALLFCCCCCGRPVEGKEGVAVGDGSPAVRMKHHVYTVLANMGSAMP
CITLWSSGLPRVTVSHHDPELTFNHSFIEQPSSGWVTDSFETDDEGEVVYCEPPREDVLT
VAGGELQELSSKCNFFPDPSTFSSDDMSQDFGIPRTSSIAKSNRPSVSFAEGTKFSPKER
RSSTQDLPGTSRKPKAWGVLMISALQGGQGNHSETEKEEKNNEETISSEEQAAESETPQT
DSERYSSGPLRTHLTVPSGRRRTLSNTRKNAQPSDSGQDADSEKLTTVYVTVGKTQKMAK
QEPPSEGPVQAMLRRLGSLQRQREEATQPKGRGQAIAKPPRRKLGERASAWEQATGSNQS
EVVMRKPSRRKHNSLSSPCTVGATDFPQENCTPKRPLSSILKSVPESDTLHSLEVEQDTE
VVYETDTLTEHTYETVAPSDRVSTSSEIIINETVVDQAENEPNYENVYVKH
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggacacctttctgacctcatttggactgatgctcatgtgtgtccaatgctcagctcag
agactgtctccgaccgggaaaaacatctgcctcagtgtcagggaatattctcccatatgt
tgttctggatggggacagaacggtgacgaatgcactgtccctctctgtgagggagaaagg
gcctgtctgcaggatgaagtgtgtgtttatcctggactttgtcgatgtaaacctggattt
tacgggtaccagtgcaaaaccccttgtcctcctgagttttgggggccggattgtcgagag
ctctgtccctgtcaccctcatgggctctgtgacccagtcactggtgagtgctcgtgcctg
cccaaccgctggggcagcttgtgccagaacagctgcaaatgtggacgtcatgggaaatgt
gatcctgtctatggcaactgcacctgtgaggagggctggtggacgtccacttgctccaaa
gcctgtcagtgccaccatgctacatccacttgtgaccaagccacgggacgctgcctgtgt
gacaaaggctactggggccaaaagtgcagcctgccatgcaactgctatgtgtccccttgc
cagcagcgcacaggggcctgtctttgtttgcatggctggtggggtccgtcctgtgatcgc
cgttgcatttgtgatctcagccatgccgactgtgacgtgcaaactggcacctgtctgtgc
tacccgggttacaaagagcctttttgcaatgagccttgtgacagtggaaagtatggcaga
ggctgtatgagaagctgtggacactgtgaaggaggcaggtcttgctctaaacatgacggc
ctgtgtgatgcctgtgcaccagggtggaatggcactcactgtgaccagccgtgtcctgca
ggttattatggccaccgctgccaagaggtttgtccgcgttgcagaaatatggacccatgt
gacacggaaaccggagcgtgctcacactgtgatcctggttggactggaccgagatgtgac
caaccctgcacagatggtacatacggagatggctgtcgtttcctgtgtaagacctgccat
catggtcactgtgatcatgtgacaggaagttgcatttgtcttcctggcttccagggcgag
agctgtaatagcacatgtcctcctaacctgtatggcatcaactgctcctccacatgtgac
tgtgggaatcatgcctgccatcctgccacaggagcttgttcaaacagtagcaggacaggt
ctcttagcagggcttttgattcccttgtgcattttaatactcgccttgttgttctgctgc
tgctgttgtgggcggcccgtcgaagggaaagaaggagtggcggttggagatggcagtcct
gcggttcgcatgaagcatcatgtttatactgtgctggccaacatgggttcagcaatgccg
tgcattactctttggtcatctggtttgcctagggttacagtctctcatcatgatcctgag
ctcacatttaaccacagcttcattgagcagccatcgtccggctgggtgacggattcattt
gaaactgatgatgaaggagaggtcgtctactgtgaaccacccagggaagatgttcttact
gtggccggtggagagcttcaagagctgagctcaaagtgtaacttcttccctgacccatca
accttcagcagtgacgacatgtcacaggattttggtatccctcgtacctccagcattgcc
aaatccaatcgtccttcagtctcattcgcagagggcacaaagttcagtcctaaagagcgc
cgtagctcaactcaagacctgccaggaacaagtcggaaacccaaagcctggggcgttctg
atgatctctgccctgcaaggaggacagggaaaccacagtgaaacagaaaaagaagagaaa
aacaacgaggagaccatctcctctgaggagcaagcagctgaatctgaaacaccacaaact
gactcggaaagatacagttctggcccactaaggactcacctcactgtgcccagtgggaga
cgacgtacactttccaataccaggaagaatgcccaaccgtctgatagcggccaggatgca
gattcagagaagttaacaacggtatatgtcactgtgggcaagacccaaaagatggccaag
caagagcccccctcagaagggcctgttcaggcaatgctgcgcagattgggcagtctacag
agacaaagagaggaggccacccagcccaaaggaagggggcaggcgatcgccaagccacca
cggaggaaactgggagaacgggccagtgcgtgggagcaagctactgggtcaaaccaatca
gaggtggtcatgaggaaacctagtcgcaggaaacacaactccctcagctctccctgcaca
gtgggggcaacagactttcctcaggagaactgcacccccaagaggccattgtcctccatt
ttaaaaagtgttccagagagtgatacgctccatagtttggaggtggaacaagacactgaa
gtagtttatgagacagacactctgacagagcacacttatgagactgtggctccgtctgat
agggtctccacgtcttcagagattattattaatgagacagttgtggaccaagcagaaaat
gagccaaattatgagaacgtttatgtaaagcattga

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