Onychostoma macrolepis: 131520518
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Entry
131520518 CDS
T09350
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131520518 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131520518 (dhx16)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131520518 (dhx16)
Spliceosome [BR:
omc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131520518 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
131520518 (dhx16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
PWI
Flavi_DEAD
AAA_30
Cas3-like_C_2
wHTH-PRTase_assc
nSTAND3
SRP54
Motif
Other DBs
NCBI-GeneID:
131520518
NCBI-ProteinID:
XP_058600784
LinkDB
All DBs
Position
15:complement(23221532..23235979)
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AA seq
1059 aa
AA seq
DB search
MFITVTMANLEQWVSDQLHDILGLSDRYVAQFMIGLVKKSSGPQDFVARLQQTGTIDIDQ
RITAFAHELYNKAPKKNVTEKPARALERQVMEMERKNRTYTLLEDSESDGEAARERGKEK
KSKDRDKGKKRKHLRQKKDESSSSSEEDSKKSTKVMDEPKKAAKEEEEEEWEREERERLQ
DLEERDAFAERVKLKDKDKTRHILERNDKKAYEEAQKRLKMAEEDQKKMLPELRKQSRRQ
YLSKREQEKIDDLEAEIKDEEYLFSTQNLTDKEKKDLDYKRKVRDLAQDYKKAGAKEKEE
RKNRYYMPEEKRNKSIPQKDMDLEFEETPREGGGEQGRWEEARVATATLQFGAREERERR
IKEEQDRYQLILEEEEMINFVSTAITMKGTLSEKESEPELSQAEKQKQSIQEVRRSLPIF
PYREDLLAAIKDHQILVIEGETGSGKTTQIPQYLLEDGYTNGGMKIGCTQPRRVAAMSVA
ARVAQEMNVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVIIIDEA
HERTLHTDILFGLIKDIARFRPDLKILVASATLDTERFSSFFDDAPVFRIPGRRFPVDIY
YTKAPEADYLEACVVSVLQIHVTQPAGDVLVFLTGQEEIEACCELLQERCRRLGSKISEL
IVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNA
RTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETSIPEIQRTNLGN
VVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDP
MLSKMVLASEHYKCSEEILTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHMVLL
NVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELSSCSGDSVPIRKA
VTAGYFYHTARLSKGGYKTVKHQQTVFVHPNSSLFEEQPRWMIYHELVFTTKEFMRQVIE
IESGWLLEVAPHYYKNKELEDSSSKKMPRKQGKAREELG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtttataactgtcacaatggccaatctggaacagtgggttagtgaccagctccatgac
atcctgggtttgagtgaccgatatgtggctcagttcatgatcggtctggtgaagaagtct
tctggacctcaggactttgtggctcggcttcagcaaaccggaaccattgatattgatcaa
agaatcacagcgtttgcacatgagctgtacaacaaagcacccaaaaaaaatgtgacagaa
aaacctgcccgggcgttggaacgacaagtcatggaaatggagagaaagaacagaacctac
actcttctggaggacagtgagagtgatggggaggcggccagagaaagaggaaaagagaag
aaaagtaaagaccgggacaaaggaaagaagagaaaacacctcagacagaaaaaagatgaa
agttcatcgtccagtgaagaggacagcaaaaagagcactaaagtcatggatgagccaaaa
aaagctgctaaagaagaggaggaggaagaatgggagcgggaagagagagagagacttcag
gatctggaagagagggatgcatttgctgaacgagtgaaactgaaggacaaagacaagaca
agacacatacttgagagaaatgacaaaaaggcttacgaggaagctcaaaaaagactcaaa
atggctgaagaggatcaaaagaaaatgcttccagagttaaggaaacagtcacgtcggcag
tatctgagcaaaagagaacaggagaagattgatgacctcgaggctgaaattaaggacgag
gaatacctcttctccactcagaacctcacagataaggaaaagaaagacttagattacaag
cggaaggtcagagacctggcccaagactacaagaaagctggagcgaaagaaaaagaggag
agaaagaacagatactacatgccagaggagaaaagaaacaagtccattcctcaaaaagac
atggacctggagtttgaagagactcccagagagggaggtggggagcagggccgctgggag
gaggcgagagtggccaccgccaccctgcagttcggggccagagaagagcgggaacgccgg
ataaaggaggagcaggataggtaccagctcattttagaggaagaggagatgatcaacttc
gtcagcacggccattactatgaaaggaacgctctcagaaaaggaaagtgaacctgagtta
tcacaagctgagaagcagaagcaatccatccaggaagtgagacgcagccttcccatcttt
ccttacagagaagatcttctcgctgccatcaaagaccaccagatcttggtcatagagggt
gaaaccggatctggcaagaccacccagatccctcagtatctcctggaagatggttacact
aacggaggaatgaagattggctgtactcaacctcgaagagtggcggccatgtctgtagct
gccagagtcgcacaggaaatgaatgtcaaactaggaaatgaggtgggctacagcatccgt
tttgaggactgtacgtcagaacgcactatcctgaagtacatgactgacggcatgttactc
agagagtttcttacagagcccgacctcgccagctacagtgtgatcatcatcgatgaggcc
cacgagcgaacattgcacacagacatcctcttcggtctaatcaaagacattgcacgtttc
cgccctgatctgaagattctggtggccagcgccactctggacacagagcgcttctcctcc
ttctttgatgatgcacccgtatttaggattccaggtcgtaggtttcccgtggatatctac
tacacaaaggctccggaggccgactacctggaagcatgtgttgtgtcagtgctacagatc
catgtcactcagccggctggagacgtattggtcttcctcacaggacaggaggagattgaa
gcgtgctgtgaacttctacaggagagatgtaggagactgggctcaaagatatctgaactc
attgttttgcccatctatgccaacttgccttcagacatgcaggccaagatcttcaatccc
actccgcctggagcacgcaaagttgtggtggccacaaatatcgcagagacgtctctcacc
atcgacggcatcatctacgttattgatccaggtttctgcaaacaaaagagctacaatgca
agaacaggaatggaatctctcattgtcactccctgttcacgagcatctgccaatcagaga
gcaggtcgtgcaggaagagtggctgctgggaaatgttttaggctgtacaccgcctgggcc
tttaaacatgagatggaggagacctccatccctgagatccagagaacaaacctgggcaat
gtggttctgctgctcaaaagtcttggcataaatgacctgattcatttcgacttcatggat
cctcctcctcacgaaacactggtgttggcgctggagcagctttatgctttgggtgccctt
aaccacctcggtgaactcactaagctcggccgaaggatggctgaacttcctgtggacccc
atgctgagtaaaatggttctggcttctgaacattataagtgctccgaggagattctgacc
atcgcggccatgctgtcggtgaacaactccatcttctaccgccccaaggacaaagtggtt
catgccgacaacgctcgaatgaacttcgtggtaccaggaggagatcacatggtgctgctc
aatgtatatacgcagtgggtagagagcggttactccactcagtggtgtttcgagaacttc
atccagtttcgctccatgaagcgagctcgagatgtccgtgatcagctggaggggttgatg
gacaggatcgaagtggaactgtccagctgcagcggtgacagtgtgcccattcgcaaggcg
gtgactgcgggatatttctaccacacggcacgcttgagtaaagggggatataaaacagtc
aaacaccagcagactgttttcgtccatcccaacagctcactctttgaggaacagccacgt
tggatgatctaccacgagctggtcttcaccaccaaagagttcatgagacaggtgatagag
attgaaagtggctggctgttggaagtggctcctcattattacaagaacaaagaactggag
gacagcagcagtaagaagatgccccgcaaacaaggcaaagcccgtgaagagctgggctga
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