Onychostoma macrolepis: 131520601
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Entry
131520601 CDS
T09350
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131520601 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131520601 (chd8)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131520601 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
131520601
NCBI-ProteinID:
XP_058600945
LinkDB
All DBs
Position
02:complement(24460268..24482060)
Genome browser
AA seq
2592 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDSLPEDAFSQGSSDPVEEALKLALGHVDPPMDPTPDPGVPLLS
DVVTDPALIPTPLAAPVSVPLQTLQTQQPTQMSHEVSVAPASISVQPSLSVASNSSGAAT
VLLSSPLGVPVSGAQVATQQITVTQQSAGQSAPKIVIFKGPQGQTQVLQGVTGATGSPGK
VTLARVLTGTPLRPGMAVVSGGTVLNATSPGQGQVKVGTGVQRLVQTPNGPMKQVLLTSV
PQTQSQVQTQSVQVQIPAQAQLQSPSQPAQVQAQVQVQPQTQVALQTQDQVPATTSPGTT
AAAIRPQSVTLSAVPQQVSLCQGEAKRITLVLQQPSQGGAAQTGTLTVGGTAGAGHQGQQ
PRLVLGSLPGKLVLQGGQLAAFAQARTGQTGAQPKVLTIQLQVQQQPNQQGAKFQLVSGA
ANAGGSPQVVQISQGQGGQRLAVPLKLLLQPQSSTASSAGGAVSVVKVINTSAAGSASIT
TTTAASSGVRLAKIQEPVRRVETLCKQEKANRIVAEAIARAKARGERNIPRVLNQDELPA
GHTSADIEGATGAGGAKKKGVGGGSSSGGSKKKSPSAGGGKVVAGGDKKSKAKTPGVVSG
GGGSKSKCKTKLNTITPVGGKKRKRNASSDHSDIDLSPPVSPRTLEEEMSQKRRSNRQVK
RKKYTEDLDIKITDDEDEMDADVDVTTTPVSSAGHLQSMGAELQQELDGDGLPSMQFFVE
NPSEEDAAIVDKILSMRVTKKEVSPGQYTNVEEFFVKYKNYSYMHCEWASLEQLERDKRI
HQKLKRFKTKQAQMRNLFQEDEEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSL
PYEDATWELKEDVDEAKVEEFRKIESRPARLKRTPRPAASAWKKLDESREYKNGNQLREY
QLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFAVGVQGPFLIIAPLSTITNW
EREFSTWTDMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMILSDC
PELREISWRCVVIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFL
EPAQFPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELT
DVQKKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVAELR
QVYDPLASDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKR
YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNP
QNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDNSV
NGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTF
SKASFVASENRTDIALDDPEFWQKWAKKADIDMDSLNRKNTLVIDTPRVRKQTRQYSSLR
GEGGDLSDLDSDEDYPPHNSRQSRASRRSDRHSGGGYGRTDCFRVEKHLLVYGWGRWRDI
LSHARCKRRLSERDVETICRVILVFCLIHYRGDENIKSFIWELITPPENGREPQALLNHS
GLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRVRM
LYYLKQEVIGEHADSVLRGADARDIDIWLPEMEQQDVPSGWWDAEADRCLLIGVYKHGYE
MYTTMRADPCLCFVERCGRPNEQDINAEQQAADPELGEGGDYDKYSEDPEFKPATRHTKE
VYEEADSVNADGEICVEDHSAPVQIEGPSSGSSDLCYWPTSSSLTARLRRLITAYQRSYR
REQLKIEAAEKGDRRRRRCEQATKLKEIARQERQQRYVPLINRYKSFLFSLDVQRSYKRL
CFRWTRREECDFYRVVSTFGVERIKKEADAPEGDEYHMSWNHFRSFARLDKKTDESLTRY
FKCFMSMCRKVCHLRPARGEESQDLSQSLAPITEERASRTLYRVSLLCRLRERVLPHPSL
EERLSLAPLSSDLPNWWNVPQHDHELLLAAARHGVSRTELSIFSDPQYSFSQARLDYLQN
QQAQAASQMHALSQSQDPTSIKEESLDDDSRLLGVEALCPSDSPAMLLTHSEGKVGVPAG
WGWKKSKNNGPSERKGERERGEGPSDSDSDSDSGSSSSSRHSGSSDDSGDSDAEREQAAL
KMCDGDEENSILSLTPSQEGAPPESLTDPLRVDWPKDRMLINRIDNLCSLVLAGHWPTGR
RYVSDIQLSTTPDEHDLGDGLGYPRVARKSNSALSADALEGQESEFTVKLLKEEGLKLTF
SKQALMPNGEGSARKKRKDHELVDAEGVLHAPRRRDLPNWLKENPDYEVEGDMLELLVNR
TKRKRRRKRVEKGAALTGSERVKVIDIRTGKKFGGIYGPLLQDLREHLEENPDHVVAPEW
SETVRNSGFLPESSFHRLLSPHASIPKKNRHYLSTPSIQTDDPLLGGGEGETLVSDGAYM
MDDEDLEDGSHLTSSHHFLTPAYDVKMEPSALDMDGGDSLSQGGYDSSDREAILDDVIMA
PKNSDSSSSSED
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccattatggacctctttgatgacacaccactgttcaatttggattcccta
ccggaggatgcattctcacagggctcctcagacccagtcgaggaggcgctgaagttggca
ctgggccatgtggacccacctatggaccctacaccggatcctggtgtccctctgctcagt
gatgttgtcacagatccagctctaatcccaacacccctcgcagcacctgtctccgtccca
ctgcagacccttcaaacacagcagcccacccagatgtcccatgaggtttctgttgccccg
gcttcaatttccgttcagccctctctctcggtggccagtaatagcagtggggcagcaacg
gtcctgctgagctcccctcttggagtacctgtgtcaggggctcaagttgccacccagcaa
atcactgttacgcaacagtcagcagggcagtcggctccaaaaattgtaattttcaaaggc
cctcagggtcagactcaagtgctacagggtgtcacaggagccacaggctctccagggaaa
gtcacccttgctagagttctgacagggaccccgcttaggccagggatggcggttgtttcc
gggggaacggtgttaaatgcgacatctcctgggcagggacaggtcaaagtaggcactgga
gttcaaaggctggttcagactccaaatggcccgatgaagcaggtgttactgacctcggtg
cctcagactcaatcgcaggttcagacacaatcagtccaggtgcagatacctgcacaggcg
cagctgcagtcaccgtcacagccagcacaggtacaggcgcaggtccaggtgcagcctcag
acgcaggtggcattacaaacacaggaccaagtgccggctactacatcccctggaacgaca
gcagcggccatccgacctcaaagtgtcacactttcagcagtgccacagcaggtcagtctc
tgccagggggaagcaaagaggatcactctggtgctacagcagccctcgcaaggtggagca
gcccagactgggacattgacagtagggggaactgcaggggcgggtcaccagggccagcag
cccaggctggtgttgggctctttgccagggaagttggtcctgcagggaggccagctggca
gcttttgcccaagccagaacgggtcaaacgggtgcacagccgaaagtgctcaccattcag
ctacaagttcaacagcagcccaaccaacagggagccaagtttcaattggtttctggggca
gctaatgctggtggcagccctcaggtggtgcagatttctcaaggccaaggaggacaaaga
ctagcagtgcctcttaaactactgctgcagccacagtcaagcactgcttccagtgctggt
ggggccgtttctgtggttaaagttatcaatacctcggctgccgggtctgcgtccatcacc
accactacagccgcgtcttccggtgtgcgtttggcaaagatccaggagcccgtgcgaaga
gtggagaccctgtgcaaacaggagaaagcaaatcgcattgttgctgaggccatcgcacgg
gccaaagccaggggtgaaaggaacatcccccgtgtgctcaaccaggatgaactgcctgcc
ggacatacctcagcagacatagaaggtgccacaggagctggaggagccaaaaagaaagga
gtaggtggaggtagtagtagtggagggagcaagaagaaaagcccaagtgcaggaggaggg
aaagtggtggccggaggagacaagaaatccaaggcgaagactccaggagtggtttctgga
ggcgggggcagtaaaagtaaatgcaagactaagctcaacaccatcactccagtgggtggt
aagaaaagaaaaagaaatgcatcctctgaccattcagatatagatctaagcccacctgtt
tcaccccgcacactggaggaggaaatgtcacagaagcgacgttctaaccgtcaggtgaag
cggaagaagtacacagaggatttggacattaaaatcactgatgacgaagatgaaatggat
gcggatgttgacgtaaccacaactcctgtgtctagtgcagggcatctgcagtctatggga
gcagaactccagcaggaactggatggggatggtcttccaagcatgcagttttttgtggaa
aacccaagtgaggaggatgctgctattgtggataaaatattgtctatgcgggtgaccaaa
aaggaggtgtctccagggcagtatactaatgtggaggaattttttgtcaaatataaaaac
tactcgtacatgcactgtgaatgggccagtcttgaacagctggaaagggataagagaatc
catcagaagctgaagagattcaagacaaaacaggcacagatgaggaacctattccaggag
gatgaggaacctttcaatccagactacgtggaggttgatcgtattttggatgagtcacat
agtgtcgataaagacaatggggagccagtagtgtactacctagtgaagtggtgctctctg
ccctatgaagatgctacttgggagctgaaggaggatgttgatgaagcaaaagtggaagaa
ttcaggaagattgaaagccgcccggcccgactcaagagaactcctcgacctgctgcaagt
gcctggaagaagcttgatgagtccagagagtataagaatgggaaccagctccgagagtac
cagctggagggagtcaactggttgctcttcaactggtacaacaggcaaaactgcatcctg
gcagatgaaatgggtctggggaagaccattcagtccatagccctgctgtcagagatgttt
gctgtaggggtccaggggccgttccttatcattgcccctctatccactatcacaaactgg
gagagagagttttccacctggacagatatgaatgctatcgtttaccacggcagtctggcc
agtagacagatgatccagcagtatgaaatgtactgcaaagatgacaagggacacttgata
ccaggggcctataaatttgatgctctaatcacaacctttgagatgattctatcagattgc
ccagagctgagggagatttcttggcgctgtgtagttattgatgaagctcaccgtttgaag
aacagaaactgcaaactacttgacagcctcaagatgcttgaccttgagcataaagtgttg
ttaacaggcactccacttcaaaacacagtagaggagctgttcagtttgctgcactttctg
gagccggcccagttcccctcggagatagagtttttgcgtgagtttggagatcttaaaaca
gaggagcaggtccagaaactgcagtcaattctaaagcccatgatgctgcgtagactgaaa
gaagatgtagaaaagaaccttgccccaaaacaagagaccattattgaggtggagttgact
gatgtacagaagaagtattaccgtgctattctagaacgtaacttcagcttcctcagcatg
ggagccacacaaaacagcaatgtacccaatctcctcaacacaatgatggaacttcgaaag
tgctgcaaccacccttacctcattacaggtgctgaggagaagatagtggctgagctgagg
caggtgtatgatcctctggcttcagactttcatctccaggctctggtgcgctctgcaggg
aaactggtcttgctggataagctgcttcctcgccttaaggctggcgggcacaaggtgctc
atcttctcacagatggtgcgatgccttgacatccttgaggactacctcatacacaagaga
tacctgtatgagcgcattgacgggcgggtcagaggaaacctgcgacaagcggccattgat
cgctttagtaaacctgattcagaccggtttgtcttcctgctttgtacccgggctggaggt
ttgggcattaatctgactgctgctgacacctgtgtcattttcgactctgactggaaccca
cagaatgatcttcaagctcaggcacgttgtcatcgtattggtcaatctaaagcggtgaag
gtttatcgtctcattaccagaaactcctatgagagggagatgttggacaaagcgagtctt
aaactgggacttgatcgagctgttctgcaaagcatgagtggaaataaggacaacagtgtt
aacgggattcagcagttctcaaagaaggagatagaggatttgcttcgtaaaggtgcttat
gcagccattatggatgagaacgacgagggcagccgtttctgtgaggaggacatcgatcag
atacttcagagaagagcaactaccatcactatagagagtgaaggcaaaggatccaccttt
tccaaggccagctttgtggcgtctgagaaccgcacagatattgctctggatgatcccgag
ttctggcaaaagtgggccaagaaagctgacatagacatggactctctcaacaggaagaat
actcttgtgattgacacaccgagagtaagaaagcaaacacgtcagtattccagtctgcgt
ggagagggtggggatctgtctgatttggacagcgatgaagactacccaccccataattcc
cgacaatctcgggcctctcgacgctcagaccggcattctggtggtggttatgggcgcaca
gactgcttcagagtggaaaaacacctacttgtttatgggtggggccgttggcgggatatc
ctgtctcatgctcgctgtaagcggcgtctcagtgaacgtgatgtggaaaccatctgccgt
gtcatcctggttttctgtctgatacattaccgtggagatgagaacatcaaaagcttcatc
tgggagctaatcacccctccagagaatggacgagaaccacaggctctgcttaatcactct
ggtctgtccatccctgtccctcgtggcaggaaggggaaacgagtcaaggctcagagctct
tttgatgtgcagaaagttgagtggatccgaaagtataatcctgatagtcttctgcttgat
gacagttaccgaaaacacctcaaacaccagtgcaacaaagtgttgctgagagtacgtatg
ctgtattacctgaagcaggaggtcattggagaacatgctgattctgtattgagaggagct
gatgcaagggatattgatatctggttgcctgaaatggagcagcaggatgttccgtctgga
tggtgggacgcagaagctgaccgatgcttgcttatcggtgtctataagcatggatatgag
atgtacaccactatgcgtgctgacccctgcttgtgttttgttgagcgatgtggccgtcca
aatgagcaggacattaatgcggagcagcaagcagcagacccagagcttggggagggaggg
gactatgacaagtactcagaagatccagaatttaaacctgcgacaagacacaccaaggag
gtatatgaagaggctgattcggtgaatgcagatggagagatttgtgtggaggatcactct
gcccctgtgcagattgaggggccatcttcaggatcgtcagatttgtgttactggccaaca
agctcatcgctcacagccagactacgccgtcttatcacagcctaccaacgcagttacaga
cgagagcagcttaagatagaggcagcagagaagggcgaccgtagacgtagacgctgtgaa
caagccacaaagctcaaagagatagcccgccaagaacgacagcaaaggtatgttccttta
ataaaccgttacaaaagtttcctgttcagtctcgatgtccagcgttcttataagcgtctc
tgtttcaggtggactcgtagggaggagtgtgatttttatagggtggtatcaacctttggg
gtcgaaaggataaagaaagaagctgatgctccagaaggggacgagtatcatatgtcctgg
aatcacttccgttcttttgctcgccttgataagaaaaccgacgagagcttgacgcgttac
ttcaaatgctttatgtccatgtgtcggaaagtgtgtcaccttcggccagcacgtggagaa
gaatctcaagatttgtcccagtctctggcccccatcacagaagaacgagcctcgcgcaca
ctgtacagggtcagcttgctttgtcggctacgtgagcgcgttcttccccacccctcattg
gaggaacgcctcagtctggcaccactctcctctgaccttcccaactggtggaacgtccca
cagcacgaccatgagctgctcttagctgccgctagacatggcgtcagccgcactgaactc
tcaatcttctctgacccacagtactcattcagtcaggcccgcctcgactacctccagaac
cagcaagcccaagctgcttcgcagatgcacgcgttaagtcagtcacaggatccgaccagc
atcaaagaggagagcctagatgatgattctcggctgctgggggtggaggccctctgtccg
tctgactctccagctatgctcctcacccattctgaggggaaagttggagttccggctgga
tggggctggaagaagagcaaaaacaatgggcccagtgagagaaaaggagaaagagagaga
ggtgaagggccttcggactccgattctgattcagactcgggctcgtcttcctcctcccgt
cattctggcagctcagatgatagcggagacagtgatgctgagagagaacaagcagctctt
aagatgtgcgatggcgatgaagaaaacagcatcctctcactcacaccatctcaagaaggc
gccccgcccgagtccctcactgaccctctgagagttgattggcccaaagaccgcatgttg
ataaaccgaatagacaacctctgctcactggttctagcagggcactggccgacaggtcga
cgctacgtctctgacatacagctcagtactacacctgatgagcatgacctcggagatggc
ctaggttacccccgagtggcacgcaaaagcaacagtgccctttctgcagatgctcttgaa
ggccaagaatcagagttcacagtaaaactgctaaaggaggaggggctgaagttgactttt
tctaagcaggctctcatgccaaacggtgaagggagtgcacgcaaaaagagaaaggaccac
gagctggtagatgccgaaggggttctccatgctccccgcagaagggaccttcctaactgg
ctcaaagaaaacccagattatgaagtggagggagacatgttagaattactggtgaaccgg
accaaaaggaagaggaggaggaagagggtagagaaaggagcagcacttaccggcagtgag
agagtgaaggtcatagacataaggacaggcaagaagtttggtggaatatacgggccttta
ctacaggacctgagagagcacctggaggagaatcctgaccacgttgtagcaccagaatgg
tctgagactgttcgcaactcgggcttcttgcctgagagttcattccacagactgttgagt
ccccacgcttcaatccccaaaaagaatcgacattacctctccaccccttcgatccaaact
gatgaccctctcctgggaggcggcgaaggagagacgttagtttccgacggcgcatacatg
atggacgacgaggacctggaggacggcagtcacctcacatcatctcaccacttccttact
ccagcctacgatgtgaagatggagccgagcgctcttgatatggacggaggcgacagtttg
tcacaaggtggctatgatagctcagacagagaggccattttggatgatgtcatcatggca
ccgaagaattcagactcttcctcaagctccgaggattga
DBGET
integrated database retrieval system
