Onychostoma macrolepis: 131520665
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Entry
131520665 CDS
T09350
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03022
Basal transcription factors
omc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131520665 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
131520665 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131520665 (ercc2)
03036 Chromosome and associated proteins [BR:
omc03036
]
131520665 (ercc2)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131520665 (ercc2)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131520665 (ercc2)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131520665 (ercc2)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131520665 (ercc2)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131520665 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
131520665
NCBI-ProteinID:
XP_058601064
LinkDB
All DBs
Position
15:complement(16029131..16039203)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
KAYPLEVTKLVYCSRTVPEIEKVVEELRKLMDYYAKQTGVKNDFLALALSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYIRAQHHSNPSQPLCQFYEEFNAVGRQVPIPPGIYNLDDL
KDFGRRKGWCPYFLARYAILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQTNVETLQNTISKIKETDAAKLREEYRRLVEGLKEANVARE
TDIYLSNPVLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKD
IFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSAITLISHFATLVSTYSKGFTIIIEP
FEDKTPTIANPVLHFSCMDPSIAIKPVFGRFQSVIITSGTLSPLDIYPRILDFHPVTMAS
FTMTLARTCLCPLIVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYMYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHLTDGSLNLTIDETVQLGKHF
LRQMAQPFRREDQLGLSLLTLEQLQSEDMLQKIAQIAQQA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaatatcgaggggttattagtctactttccgtatgactacatttatcctgaa
caatactcgtacatgcttgagctgaagaggacgctggacgcaaagggtcatggagttctc
gagatgccttcaggaacaggaaaaactatttctcttctttccctcattgttgcttaccag
aaggcttaccctttagaagtcaccaagcttgtctactgttctcgcacagtgcctgaaata
gagaaggttgtggaggagctaaggaaactaatggattactatgcaaagcaaacaggagtg
aaaaatgacttccttgcactggcactttcttcacggaaaaacctgtgcattcatcctgag
gtgagctctctgcgttttggaaaagaagtagatggaaagtgtcacagtctgacagcatca
tatatccgcgcgcagcatcacagtaacccaagtcaacctctctgccagttctatgaggaa
tttaatgcagtaggcagacaggtgcccattcctcctggtatatataacttggatgatctg
aaggactttgggcgtagaaaaggctggtgtccgtacttcctggcacgttacgcaattctt
cacgcaaacattgtagtgtacagctaccattacttacttgatccaaaaattgcagacctg
gtctcgaaagagctcgcaaagaaatctgtagttgtgttcgacgaggctcacaacatcgat
aatgtgtgtattgattccatgagcgtcaacattaccaggaggactctggatcgctgtcag
actaatgtggaaaccctgcaaaacaccattagcaaaattaaggaaaccgatgctgccaaa
ctcagagaagaatacaggagattagttgaaggtcttaaagaagcaaatgttgccagagaa
actgacatctatctgtccaacccagttctgccagatgaaatcctccaagaggctgtacct
ggcagcatccgcactgcagagcactttgtgggctttatgaagcgcttcctggagtacctg
aaggcacgtttgcgaatccatcacgtggttcaagagagtgcccctcagttcctcaaagac
atctttgagaaggtctgcattgatcgcaaacccctgagattttgtgcagagcggctgcgc
tcactgctgaggacactggagatcgcagacattgctgacttctcagccattaccttgatc
tcacactttgccacacttgtcagcacctacagcaaaggcttcaccatcatcattgagccc
tttgaagataaaacgccaacaatagcaaatcctgtccttcacttcagttgcatggacccc
tctatcgccataaagccggtgtttgggcgctttcaatcagtcattatcacatcagggact
ctctctccgctggacatctatccacgcatccttgatttccacccagtcactatggcatcc
ttcaccatgacactggcacgaacctgcctgtgccctcttattgttggcagagggaatgat
caagtagcgatgacctccaagtttgagaccagagaagattttgctgtgatccggaattat
ggaaacctgctgctggagatgtctgccatcgttcccgatgggatcgttgcattcttcacg
agttacatgtacatggagaacattgtggcctcgtggtatgaacagggcatccttgaaaac
atccaaagaaacaagctcattttcatagaaacccaggatgcagctgagaccagcatggcc
ctggagaagtatcaagaggcctgtgagaacggcagaggagcaattctgctctcagtggca
agagggaaagtgtcagaggggattgactttgttcatcattttggccgtgccgttatcatg
tttggagtaccatacgtttacacccagagtcgaatcctcaaggcacggttggaatacctc
agagatcagtttcaaatccgggaaaatgactttctgacgtttgatgcaatgcgccatgcg
gctcagtgtgtgggcagagccatccgaggcaaaacagactacggcctgatgatctttgcc
gataagcgttacgcacgagcagataagcgaggaaagctgccccgctggatccaggaacac
cttacagatggaagcctaaatctgaccattgatgagactgtgcagttaggcaagcacttt
ctacgacagatggcccagcccttcagacgggaggatcagttgggtctgtccctgctgacc
ctggaacaactgcagtctgaggacatgcttcagaaaattgctcagatcgctcaacaagcc
tga
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