Onychostoma macrolepis: 131520731
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Entry
131520731 CDS
T09350
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omc
Onychostoma macrolepis
Pathway
omc04137
Mitophagy - animal
omc04140
Autophagy - animal
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131520731 (hif1al)
04137 Mitophagy - animal
131520731 (hif1al)
04148 Efferocytosis
131520731 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131520731 (hif1al)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131520731 (hif1al)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
131520731
NCBI-ProteinID:
XP_058601164
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Position
15:complement(17046460..17059915)
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AA seq
623 aa
AA seq
DB search
MKGPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVALSYLRM
NRLIQSAGPTKTPTEETESPTDAFYQQALAGFILVMTEEGDMVFLSESVSKYIGIPQLEL
LGQSVYEFVHPCDQEELRDILATRPGVSKKKTEKLTKHNFFLRMKSTLTHTGRTVNVKSA
TWKVLHCTGHMQTFSGDDENGPPAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHNMDLSF
TQCDGRVTELVGYQPDDLIGRSAYEFYHALDFDHVTRSLRILFSKGQVCTSHYRFLAKNG
GFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCEKPKPRAEKLSLLK
EDEDSDMEEESSTAKLFLQMKENPEELLQLAPHSGDAVISLTELSFCCPSSPNTVPECPQ
EFCTAELRQLLSPIFDRPTKSPAATSPAEELPMEMDGVEKFFALKPEESVTIKGQSEAMD
ELDLDMLAPYISMDDDFQLTFLPQGEMAAPSDMLTKTSRKRCLEDEEDDDIPVLAAKWEK
KPMSRSIEEQLLLSHTLLSSLSDDGSEEFEPLPQKRSQLLTDRDPLLGGAQALSDTAALM
RDTFLSRPPDLKRLVAETMPYLT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtcccagtttggagcagcggaaggtgcgttcgcgtgacgcagcacgctgtagg
aggagtcaggagactgaggtgttttacgagctggcccattcactaccccttccacgacgt
atcgcctcccacctggacaaagctgccatcatgagggtggcgctcagctatctgcgcatg
aaccgcttgatccagtcagcagggccaaccaaaacaccaactgaagaaacagagagtccc
actgatgccttttatcagcaggcactggctggctttattctggtgatgactgaggaaggg
gacatggtcttcctctcagagagtgtcagcaaatacatcggcataccacagctggagctg
cttggacagagcgtgtatgaatttgttcatccctgtgaccaagaagaattacgagacatt
cttgccacaagacctggtgtttcaaagaaaaagacggagaagttaaccaaacataatttt
tttcttcggatgaagagcacactcacccacacaggaagaacagttaatgtcaagtctgca
acctggaaggtccttcattgcacaggacacatgcagacgttcagtggcgatgatgagaat
gggccccctgctggcagctttctgactctcctgtgcgagcccattcctcacccctccagc
gttgaattcccactagacagcagcactttcctcacacgccacaacatggatttgagtttc
acacaatgtgacggacgagtcactgagcttgttggatatcaacctgatgatctgattggc
cggtctgcctatgagttttatcacgcccttgattttgatcatgtgaccaggagtttacgc
atcttgttctccaaaggccaggtgtgcaccagccattaccgcttcctggctaaaaatgga
ggatttgtgtggactgagactcaagccactgtcctctacaacagcaggacctctcaacct
gaggctgtggtctgtctcaactttatcctcagtggtgttgaagaggcggatgttgtgttc
tcattagaacagacctgtgagaaaccaaagcccagagctgagaagctgagcttgctgaag
gaggatgaggactcagacatggaggaggagagcagcactgcgaaactcttcctccagatg
aaggagaacccagaggagttactgcagctggcacctcattctggagacgctgtcatttcc
ctaacagagttgtccttctgctgtccatctagtcccaacactgtcccagaatgccctcag
gaattctgtacggctgaactccgtcagctcctttctccaatattcgacaggcccaccaaa
tctccagccgctacgagccccgctgaagagctgcctatggagatggatggggtggagaag
ttcttcgccctcaaaccggaggagagtgtaactataaaaggacaatcagaggctatggat
gagcttgatttggacatgttggctccatacatctccatggatgatgacttccagttgacc
ttcctgccacagggtgaaatggctgcaccttcagatatgctgaccaagacttcaaggaaa
cgatgtttggaagatgaggaggatgatgacattcctgttctggctgccaaatgggagaag
aaaccgatgagcaggtccatagaggaacagcttcttctcagccacacattactgagtagc
ctatccgatgatggttcggaagaatttgaaccgctacctcaaaagcgaagtcagctcttg
accgacagagacccgttgctgggcggagcgcaggcgttgtccgatacagcagctctcatg
agggacaccttcctgtcgcgcccgcctgacttaaagagactcgttgctgaaacaatgccg
taccttacttga
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