Onychostoma macrolepis: 131520946
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Entry
131520946 CDS
T09350
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
omc
Onychostoma macrolepis
Pathway
omc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131520946 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131520946 (rabgef1l)
Membrane trafficking [BR:
omc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131520946 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
131520946 (rabgef1l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
131520946
NCBI-ProteinID:
XP_058601503
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All DBs
Position
15:151866..160807
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AA seq
469 aa
AA seq
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MNSQGVRRGISVQQSDLMCKRGCGFYGNAVWQGLCSKCWREENQCTRAKQIEDDRALAER
LQREEEAAYACSREEAPSRPETSKTHSVPMVKRLFTSAPKTPARRDAGALKTAGSQSTSL
SAERDHVTQHFIDFLKTFQRPGYDIFKQCHAFAENIAHKKVAVGGEDFSDSVQDFYQNMS
EYLQTNLKGSPDVMETVMDEVERYVMGRLYKQLFCPDNTDDEKKDLATQKRIRALHWVSI
AMLCAPVDEQIPKVSDSVERAITDLIDLDSKRVPKEKLACVTRCSKHIMTAVQGSKKAAA
SADDFLPTLVYIVLKANPPRLHSNIQYITRYCNPSRLMSGEDGYYFTNLCCAVAFIEKLD
AQSLNLSHEDFELYMSGASSPPGPKDASSGHSSQNGFRGQNHAAEPQLEETRPLETDLIE
WSDGQELSVLGMLEGPPVRTHTSTTFTIDSDNIGGDSLPPPLQPQKFAG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcagggggtgcgccggggcatcagcgtccagcagtctgacctgatgtgtaag
agaggatgcggtttctacggtaacgccgtctggcagggcctctgctccaaatgctggcga
gaggagaaccagtgcaccagagccaagcagatagaggacgacagagcgctggccgagagg
ctacagagagaagaggaagcggcgtatgcctgcagccgtgaggaggcgccttcacgacca
gagacctccaaaacacacagcgtgcccatggtgaagaggcttttcacctccgctcccaaa
acacctgcaaggagagatgcaggagctctaaagactgccgggagccagagcacctcgctc
agcgcagaacgtgaccatgtgacacagcacttcatcgacttcctcaagaccttccagagg
cctggatatgacatttttaaacagtgccatgccttcgctgaaaatattgcacacaaaaag
gtggctgtaggtggtgaagatttctcagactctgtgcaggatttctatcaaaacatgtct
gaatacctacagaccaacttaaaagggtctccagatgtgatggagacggtgatggatgag
gtggagcggtatgtgatgggccgtctgtataagcagctcttctgtcctgacaacacagat
gatgagaagaaagacctggccacccagaagagaatcagggctttgcactgggtgtccatt
gcgatgctgtgtgctccagtagacgagcagatccctaaagtgtcagacagtgtggagaga
gccataacagacctgattgacttggactccaaaagggttcccaaggagaagttggcgtgt
gtcaccaggtgtagtaaacacatcatgacggccgtccagggcagtaagaaagctgccgcc
tcagcagatgattttctgcccactctcgtctacatcgtgctgaaggccaatccgcctcga
ttacactccaacatccagtacatcacccgctactgcaaccccagccgcctcatgagcgga
gaggacggctattacttcactaacctgtgctgcgccgtggcgttcatcgagaagcttgat
gcacagtctctgaacctgagtcatgaagactttgagctctacatgtccggtgcgtcgtct
ccgccgggtcccaaggacgcttcatccggccacagctcacagaacggcttcagagggcag
aaccacgcggcagaaccacagctggaggagacgcggcctctggaaacagacctcatcgaa
tggagcgacggccaggagctctcagtgctgggcatgttggaagggcctcctgtaaggaca
cacacctccaccaccttcactattgactcggacaacataggcggcgacagcctgcctcct
ccattacagccgcagaagttcgctggatag
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