Onychostoma macrolepis: 131521584
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Entry
131521584 CDS
T09350
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131521584 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131521584 (u2af2a)
Spliceosome [BR:
omc03041
]
Complex A
U2 snRNP components
U2 related factors
131521584 (u2af2a)
Complex B
131521584 (u2af2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
131521584
NCBI-ProteinID:
XP_058602453
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All DBs
Position
16:20428276..20439412
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AA seq
483 aa
AA seq
DB search
MSDFDEFERQLTENKQADRDKENKHHRRSGSRSRSRDRDRKRRSRDQDRERRGGSRDRHG
DSKDRRHRRSRSPHREKKKIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMT
PEGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPV
LAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYV
PGTSLFCSPNSCVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSAT
GLSKGYAFCEYVDVNISDQAHSLLSQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQ
TPVTLQVPGLVNSSVTQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECSKYGQV
KSIEIPRPVDGVEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRR
DFW
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattttgacgagtttgagagacagctgaccgaaaacaagcaagcggacagagac
aaggagaacaagcaccaccggcgcagtggctcgagaagtcgcagcagagaccgggacagg
aaaagaaggagccgggaccaagacagagaaaggagaggaggcagccgagatcgtcatgga
gacagcaaggaccgcagacacagacgcagtcgctctccacaccgtgagaagaaaaagatt
aaagtgaaaaaatattgggatgttcctcctcctggatttgaacacatcacaccaatgcag
tacaaagccatgcaggctgccggtcagatcccagccactgctttgctacccacaatgacc
cctgagggtctggctgtgaccccaacacctgttcctgtcgtgggcagtcagatgactcga
caggcccggcggctttatgtcggcaacatcccatttggcatcacagaggagtctatgatg
gacttcttcaatgctcagatgcgtttgggtggcctgactcaggccccaggtaacccagta
cttgctgttcagatcaaccaggacaagaattttgcctttttggagtttcgttcggtggat
gaaacgacacaagccatggcatttgatggcataattttccagggacagagtttaaagatt
cgcaggccccacgactaccagcctctgccaggcatgagtgagaatcccagtgtctatgtc
ccaggcacgtctctcttttgctcccccaattcttgcgtcgtctccacggtggtgcctgat
tcggcccataaactcttcattggcggtctgccaaattacctcaacgatgaccaggtcaag
gaattgctgacatcgtttggccctctgaaggcctttaatttggtgaaagacagtgcaaca
ggcctttctaagggctatgccttctgtgaatatgttgacgtcaatatcagtgaccaggca
cactctttactctcacaggccattgcgggcctaaacgggatgcagctgggtgacaagaaa
ctcctggtacagagagcaagcgtcggctccaagaacaccacactgacgggtataaaccag
acaccagttacccttcaagttccaggtctcgtgaacagctcggtgactcagatggggggc
attcccacagaagtattgtgtctgatgaacatggtggctccagaggagctgctggatgat
gaagagtatgaggagatcgtggaagacgtcagagaggagtgctccaaatacggccaggtc
aagagcatcgagatcccacgtcccgtcgatggcgtggaagttcctggcactggaaagatc
ttcgtggagttcatgtcagtgtttgactcccagaaggcaatgcaaggcttaacaggaagg
aaattcgccaacagagtggtggtgactaaatactgcgaccctgatgcctaccaccgccgc
gacttctggtag
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