Onychostoma macrolepis: 131521641
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Entry
131521641 CDS
T09350
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omc03009
]
131521641 (dcaf13)
04121 Ubiquitin system [BR:
omc04121
]
131521641 (dcaf13)
Ribosome biogenesis [BR:
omc03009
]
Eukaryotic type
90S particles
Other 90S particles
131521641 (dcaf13)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131521641 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
KNTC1_N
eIF2A
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
DUF6481
Motif
Other DBs
NCBI-GeneID:
131521641
NCBI-ProteinID:
XP_058602561
LinkDB
All DBs
Position
16:6654875..6664359
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVA
SLDGHRDGISCITKHAKSLSTIISGACDGEVKVWNLTKQECLRTVQAHEGFVRGICSRFC
GTSFFTVGDDKTIKQWNMEAPGYGVREEPINTILGKAVFTGIDHHQREGTFVTCGQTVDI
WDEQRSSPIRSFSWGVDSFSCVRYNPVETELLASCASDRSIVLYDTRESAPLRKVIMQLR
SNTLCWNPMEAYYFTCANEDYNLYTYDIRNLDVPVNVHMDHVSAVLDVDYSPTGREFVSA
SFDKTVRIFPKNQNHSREVYHTKRMQHVICVRWSADNKYVLSGSDEMNIRLWKANASEKL
GLLSAREKAAANYNKKLIEKFQHHPQVKRIARHRHVPRDVLKQKRELQEMKEARRRKEQN
VRKHSKPGSVPLLTEKEKHVVAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttgtagaaacccggacgattatgttcgagagacgactagagat
atacagcgagtgccaaggaattacgacccgaccctgcatccttttgaggtgcccagagaa
tacaccagggccctaaatgccactaaactggagagggtatttgccaaaccctttgtagct
tcactagatggacacagagatggcatcagctgcatcaccaaacacgccaaaagcctgtca
acaatcatatctggtgcctgcgatggggaggtgaaagtgtggaaccttactaagcaggag
tgtttgaggacagttcaggctcatgaaggatttgtacgaggaatctgttcccgcttttgt
ggcacttcctttttcacggtaggagatgacaagaccatcaaacagtggaacatggaggcc
ccaggatatggagttcgggaggaaccaattaacacaattctggggaaggcggtgttcact
ggcattgaccaccaccagagggagggcacgttcgtaacctgcgggcagacggtggatatc
tgggatgaacagagaagcagtcccatccgctccttcagctggggtgtggacagcttcagc
tgcgtccgctacaaccctgtggagactgaacttctcgccagctgcgcatcagacagaagt
atcgtcttgtatgacaccagagaatctgcaccacttagaaaggttatcatgcaattgaga
agcaatacgctttgttggaacccaatggaagcatattattttacctgcgccaatgaagac
tataacctttatacttacgatataaggaatctggatgttcctgtaaatgtgcacatggat
catgtatccgctgtactggatgtggattattcacctacaggaagggagtttgtatccgcc
agctttgacaaaacggtccgaatctttccaaaaaaccaaaaccacagcagggaggtgtac
cacaccaaacgtatgcagcatgtcatctgtgtgagatggtctgctgacaacaaatatgtc
ctgagcggctctgacgagatgaacattcggctgtggaaggccaacgcgtcggagaaactt
ggactgctctctgcccgagaaaaagctgccgcaaactacaacaagaagctgatagagaaa
tttcagcaccatccgcaggtgaaacgcatcgcccgtcaccgccacgtgcccagagatgtc
ctgaagcagaagagagagctgcaggaaatgaaggaagcccggcgcaggaaggaacaaaac
gtccgcaaacacagcaagccaggatctgttcctctgctgacagaaaaggagaagcatgtg
gtggctgttgtggagtaa
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