Onychostoma macrolepis: 131521675
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Entry
131521675 CDS
T09350
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
omc
Onychostoma macrolepis
Pathway
omc04510
Focal adhesion
omc04512
ECM-receptor interaction
omc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131521675 (tnn)
04518 Integrin signaling
131521675 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131521675 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131521675 (tnn)
Glycosaminoglycan binding proteins [BR:
omc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131521675 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
SdrD_B
Interfer-bind
DUF4998
EGF_Tenascin
Fn3_VIN3
Pur_ac_phosph_N
DUF7949
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
131521675
NCBI-ProteinID:
XP_058602610
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All DBs
Position
02:complement(22504518..22543190)
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AA seq
1108 aa
AA seq
DB search
MIVRFNRLKRGLFLLGMLFTVSHLVLSEEVGPAEKEVTFSHVYRIDSGCKQGSQVAQLSQ
DQASEGQLVTVDGENDIVFKHNIRLQSAGCGCADSEDFKALLYRVNGLEEEVTYLKSQCA
QGCCKGGSGVDTSCSGHGTYQHDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGRDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKVTDTSLLVEWESVRGAEYYILSYYPNGDEGAIKEVQ
VENTKNSYLITGLRPGVTYIVQVYAVIKGINSESDEIVATTEVSGIEGIKVLGQTEDSIQ
VDWKNPAIAVDFFKLTHASPDGQGGQENVAMSQEARTKHTIVGLNPGTEYQIGVQAIKGE
SEGKLSYATGVTDIDSPTNLATREVTENSATVTWDGVRAEIDGYMLTYSSAEGTSREIKV
AADATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMTREVTEDSALV
TWDKVQADIDGYMLSYSSIDGSSQEVRVGADSTSYRFTALKPGVLYTVYVWAIKGPRSSK
KSSTEAETDIDAPTNLLTREVTEDSALVTWDKVQADIDGYMLSYSSIDGSSQEVRVGADS
TSYRFTALKPGVLYTVYVWAIKGPRSSKKSSTEAETDIDAPTNLLTREVTEDSALVMWDK
VQADIDGYMLSYSSIDGSSQEVRVGADSTSYRFTALKPGVLYTVYVWAVKGPRSSRKATT
EAETEIDAPKNLKAIDVQTQTSTITWKAPQANIDGYILTYRAEDGSMQTVEKMVTARENR
FALSDLAVGKKYIVTLIAYRSTKRSRVVETSFSTVSQAYPFPMDCTQIMRNGNMESGVYT
IYVNNNRSRTMQVYCDMTTDGGGWIVFQRRNTGKIDFMRRWREYMKGFGELTDEFWLGLE
KIHELTNTPTQYEVRFDLGLGSERTYAVYDNFKVAPSKQKFKLTIGNYKGNAGDAMTYHQ
GGSFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGRFGDSRHSMGVNWEPWKGHLQS
LDFAEIKIRPVGAVGRQKRSLKRRVAVY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagattcaaccgtctgaagagaggcctgttccttctagggatgctctttacg
gtgtcccatcttgtgctttctgaggaggtgggtcctgcagagaaagaagtcacatttagc
catgtctacaggattgactccggctgtaaacagggttctcaagtggctcagctttcccag
gaccaggcctcagaaggacagttagtcacagtggatggagagaatgacattgtcttcaag
cacaacatacgtctgcagtcggctggttgtggatgtgcagattctgaggacttcaaagcc
ctgctgtaccgtgtaaatggcctggaggaggaagtcacctacctaaagagccaatgtgct
cagggctgctgcaaaggagggtcaggtgtggacactagctgcagtgggcatggcacatac
cagcatgactcttgcagttgtaagtgtaacccaggttgggagggtccagactgctccatc
tcttcctgccctgatgaatgcaacgataatggccggtgtgttgatggacgctgtgtctgc
tatgaaggctacaccggccgtgactgcagccagctcacgtgccccaatgactgcaaagac
aaaggccactgtgtggatggcaaatgtgtgtgctttagtggattctcaggagaagactgc
agtattgccacctgtccgaacgactgcataggaaatggacgctgcgtggatggacagtgc
atctgcgatgagggattctttggaatcgactgctccatggttctaggaccaaaaggcctt
cgtctgatcaaagtcacagatacatctttgctggtggagtgggagtctgtgagaggagct
gagtactacatcctgtcctactatccaaatggagacgagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctacctgatcacaggcctcagacccggagtcacatacata
gtgcaggtgtacgctgtcatcaagggcattaacagtgaatcagatgaaatagtggctacg
actgaggtctctggtattgaaggaatcaaggtgctgggccagacagaggactctatccag
gtggactggaagaaccctgcaattgccgtggacttcttcaaactgacccatgccagtcct
gatggtcagggaggacaggagaacgtggcaatgagccaagaggccagaaccaaacacacc
attgtaggcctcaacccaggaacagaatatcagataggcgtgcaagcaatcaaaggtgaa
agcgaaggcaagctgtcatatgccacaggggtcacagacatcgattccccaaccaatctg
gcaaccagggaggtgacagagaactctgcaaccgtgacgtgggatggtgttcgtgctgag
atcgatggctacatgctgacttacagctctgcagagggcactagccgagaaattaaagtg
gccgctgatgctacttcttaccagctgacctctctgaaaccaggagtcctgtacacagtt
ttcctctgggcctacaagggctctcgttccagtaggaagagcatgaccgaagcagagacg
gatatagacgctcctactaacctcatgaccagggaggtgacagaggactcggcgttggtg
acgtgggacaaggtgcaggctgacattgatggctacatgctgagctacagctctatagat
ggctccagtcaggaggttcgagtaggagctgacagcacctcctacaggttcactgctctg
aagcctggagttctctacacagtctatgtgtgggccatcaagggccctcgctctagcaaa
aagagctcgacagaagcagaaacagatatagacgctcctactaacctcttaacccgagag
gtgacagaggactcggcgttggtgacgtgggacaaggtgcaggccgacattgatggctac
atgctgagctacagctctatagatggctccagtcaggaggttcgagtaggagctgacagc
acctcctacaggttcactgctctgaagcctggagttctctacacagtctatgtgtgggcc
atcaaaggccctcgctctagcaaaaagagctcgacagaagcagaaacagatatcgacgct
cctactaacctcttaacccgagaggtgacagaggactcagcgttggtgatgtgggacaag
gtgcaggccgacattgatggctacatgctgagctacagctctatagatggctccagtcag
gaggttcgagtaggagctgacagcacctcctacaggttcactgctctgaagcctggagtt
ctctacacagtctacgtctgggctgtgaaaggccctcgctcaagcagaaaagccacaact
gaggctgaaacagagattgatgcgccaaagaatctcaaagccattgatgtccagactcaa
acctccactataacatggaaagctcctcaggctaatattgatggctacatcctgacctac
agggctgaggatggcagcatgcagactgtggaaaaaatggtgactgcgcgggagaataga
tttgcactttctgacctcgcagtggggaaaaagtacattgtcacccttattgcctacagg
agcacaaagaggagtagggtagtggagacaagctttagcacagtgagccaggcctacccg
ttcccaatggactgcactcagattatgaggaatggaaacatggagagtggcgtctacaca
atttacgtcaacaacaaccgtagcagaaccatgcaggtgtattgtgacatgacaactgat
ggcggcggctggattgtgttccagagacgaaacaccggcaaaatagatttcatgaggcgc
tggagagagtatatgaaaggctttggagagctgacagatgaattttggctcggcttggag
aagatccatgaactgactaatactcctacacaatatgaagtgcgtttcgatctgggcttg
ggatcagagcggacatatgctgtctacgataacttcaaagtagcaccatccaaacagaag
tttaaacttaccattggcaactacaagggaaatgctggtgatgccatgacctaccaccag
ggagggtctttctccacggtggattcagacaatgacattgcgcttggtaactgtgctctg
actcaccaaggtgcctggtggtacaagaactgccacctggccaatctgaacggcagattt
ggggacagcagacacagtatgggagtaaactgggagccatggaaggggcacctccagtct
ctcgactttgcagaaattaagatccggccagtgggagcagtgggcagacagaagaggtca
ttgaaaaggagagtagctgtgtattaa
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