Onychostoma macrolepis: 131521714
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Entry
131521714 CDS
T09350
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131521714 (trim71)
04121 Ubiquitin system [BR:
omc04121
]
131521714 (trim71)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131521714 (trim71)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131521714 (trim71)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
131521714 (trim71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
Beta-prop_IFT122_1st
zf-C3HC4
zf-RING_2
Invasin_D3
Ig_GEX2_N
RE_Eco47II
DUF4094
Motif
Other DBs
NCBI-GeneID:
131521714
NCBI-ProteinID:
XP_058602666
LinkDB
All DBs
Position
16:complement(25193337..25224389)
Genome browser
AA seq
824 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSSTSSTRR
LHVLPCLHAFCRQCLEGHRIPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLLDVV
VSAEEQGKNGRPSSVVHHAGLLRPQHLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIEGLMESLHLANRTNNSNTPINISQSFHNSFSMLNVFQERMDFCQQHDNA
VLRFFCDSCAVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAVQLSIE
KAQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKL
HQNLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSLRCILQPQEDDRIMFTPP
DQALLIAIKSMGLISSGAFATASKAHGEGLKRALQGKLASFTVVGYDHDGEPRLSGGDSV
SVVLMSPDGNLSSAEVSDHQDGTYTVSYLPKSEGEHLLSVLICNQHIEGSPFKVMVKSGR
SYGSVGLPIVSFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFG
TLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPW
DVAVNSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVT
DFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPN
GNFLCKFGTHGNGFGQMDRPSGIAVTPDGMIVAVDFGNNRILMF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattttgtggtcctctgcgcaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcgtcctcccagacctccaactcctcatctacctcatccaccaggagg
ctgcacgtcttgccctgtttgcacgccttttgcaggcaatgcctggagggccacaggatc
ccaggtgaccctctgaagctcagatgccccacatgcgaccaaaaagtgtctctgtcggaa
tcaggcgtggacgcgctgccttcctccaactttctcttcagcaacctgctggatgtggtg
gtctctgctgaggaacagggcaagaacggtcggccttcatcggtggtccatcacgctggt
cttctgagaccccagcacctctcagaccctcagtgcagctcttgtgatgagggtaacccc
gctacctcccactgcctggactgccaggagtacctgtgcgataactgcgtcagggcccac
cagagggtccgactcaccaaagaccacttcatcgaggggctgatggagagtttacacctg
gccaaccgcaccaacaactccaacaccccgatcaacatctcccagtccttccacaacagc
ttctccatgctgaatgttttccaggagaggatggacttctgccagcagcatgataacgcg
gtgctgcgttttttctgcgacagctgcgccgtgccgatttgtagagagtgcagcttgggc
agacatgcgggtcacagtttcacctacctgcaggaagcactgcaggactccagagcgctg
accatccagctgctcgcagacgctcagcagggcagacaggctgtacagctgagcatcgag
aaagcccaggctattgctgaacaggtagagctgaaggctaaggttgttcagtcagaagta
aaaaccatcactcttcgtcacaagaaagctctggaggaacgtgagtgtgagctgctctgg
aaggtggagaagattcgccaggtgaaggcaaaatcactttacctgcaggttgagaaacta
caccagaatctcaccaagctggatagtactatcgccacagtgacgcaggttctagaagaa
ggccgtagcatagatgtcctgctagcacgagagcacatgctaaatcagctacaggagctt
aaatccctccgctgcatcctacagccccaagaagacgatcgcattatgttcacccctcca
gaccaggctcttctgattgccatcaagtccatgggcctcattagcagcggagccttcgcc
acagcttccaaagctcacggtgaaggcctcaagagagcattgcaaggaaagctagcttcc
tttaccgtcgtagggtatgatcatgacggtgagcctcggttgtccggtggtgacagcgtc
tcggttgtgcttatgagtccggatggtaatctgtccagcgcagaggtttccgaccaccaa
gatggaacgtacacagtcagctatctgcccaagagcgagggtgagcatttgctctcagtg
cttatatgcaatcagcacattgagggaagtcctttcaaagtgatggtcaaatctggtcgc
agttacggcagtgtaggcctgcccattgtatctttcgggggagagggtgatggggatggc
cagctgtgtcggccttggggcatctgcgtggataaggagggctatgtggtggtcgctgac
cgaagcaacaaccgtgtgcagatcttcaagccttgtggcacgttccaccacaagtttggc
actttgggttctcgaccgggccagtttgaccgccctgctggggtcgcctgtgacagccag
aggagaatcattgtggcagataaggacaatcaccgcatccagatcttcacctttgatggt
cagtttcttctcaagtttggcgagaagggaaccaaaaatggacagttcaactacccatgg
gatgtggctgtcaactctgaaggcaagatcctggtttcggatacacgcaaccaccgcgtg
caactctttggacctgacgggactttcctcaacaaatacggatttgaaggtgccctctgg
aaacattttgattcgcctcgcggcgtggccttcaatcaggaaggccacctcgttgtgacc
gacttcaacaatcatcgcctgcttgtcatcaggcccgactgccagtcagcacgcttcctc
gggtctgagggaaccggaaatggccagttcttgcggccgcaaggcgtcgctgtggaccag
gaggatcgtattatcgtggccgactcccgcaaccatcgcattcaggtgttcgaacccaac
ggcaactttttatgcaagtttgggacacacggtaacggcttcgggcaaatggatcgcccc
tcgggtatagcggttaccccagatggaatgatcgtggctgtggactttggaaacaaccga
atcctcatgttctga
DBGET
integrated database retrieval system
