Onychostoma macrolepis: 131521732
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Entry
131521732 CDS
T09350
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131521732 (smg9)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
131521732 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_16
AAA_30
MMR_HSR1
DUF6079
AAA_18
Motif
Other DBs
NCBI-GeneID:
131521732
NCBI-ProteinID:
XP_058602710
LinkDB
All DBs
Position
16:complement(17336344..17341752)
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AA seq
504 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRDRDPGPPAQNLSGPSRDRDYVPRERRDGSEEPTGPLLQ
KTPIILAKPPGERSKPSVPASGAPSLEKPIMLIKTRDEGGKPGNPPDVAPSVSGAGTAKL
EREGQRPTQPVYQIQNRGMGSAASGGAVDPVIGQTKLLPPEKMKHSIKLVDDQMNWCDSA
MEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANSPEEDQRAYVFRAQTQEIKERAGNQSS
GIDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQITAFLFTV
CHVVIVIQDWFTDINLYRFLQTAEMLKPSTPSASHDSTGSSGADDGSEYYPHIVFLQNKA
RREEFCPRNLKKMHMAVDKLMAHSHLKYKGTLSMLDCNIFPGLNRDYLETEVNLFLLPMM
ENDGEDALTRAGSGPPLFSLLPGYRGHPSFSSLVSKFRSQILAMSRCQLSHTILTEKNWF
HYAARIWDGVKKSSALSEYSRLLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtcgggtcacagtcagcccgggatgtacggacagggaaggaggaggcggcga
cggcgggaccgagacccaggaccaccggctcaaaacctctccggacccagtcgagatcga
gactatgttccccgtgagcgcagggatggcagcgaggaacccacaggacctcttctacag
aagactcccattattcttgctaagcctcctggagagcgatccaaaccaagtgttccagca
agtggagccccatctttggaaaagccgatcatgctcattaaaaccagagatgaagggggg
aaacctgggaaccctcctgacgtggctccttcagtctcaggtgctggaactgccaaactg
gagagggaaggccagcggccgacccaaccggtgtatcagatccagaacagaggcatgggc
tcagctgcgtccggtggagctgtggatcctgtgattggccagactaagctcctcccccct
gagaagatgaagcacagcattaagctggtggatgaccaaatgaattggtgcgacagtgct
atggagtatctgcgagaccagacagatatgttagtagttggagttattgggctacaaggc
acaggcaagtccacaatcatgtctctcctgtctgcaaacagccctgaggaggaccagagg
gcgtatgtgttcagagctcagacgcaggagatcaaggagagagccgggaaccagagcagt
ggaatcgatttctacatcactcaggagagggtcatctttctggacacgcagccaatttta
agcccctctattttggatcatctcattaacaacgaccgcaagcttccgccagaatacaat
ctcccacatacgtatgtggaaatgcagtctctgcagatcactgccttcctctttaccgta
tgccatgttgtgattgtgattcaggactggttcaccgatatcaacttatataggtttctg
cagactgctgagatgctgaaaccctcgactccatcggccagtcatgacagcaccggctcc
tcaggggcagatgatggctctgagtattatcctcacatagttttcttgcagaacaaagca
aggcgggaggagttctgtccacgaaatctgaagaagatgcatatggcagttgacaagctt
atggcccattcccacctaaaatataaaggcaccttatccatgctggattgtaacatattc
ccaggactgaatcgagattacttggagacagaagtcaatcttttcctcttacctatgatg
gagaatgatggggaagatgctttgacaagagcaggttcaggtccccctcttttctctctg
ctgcctggttacagaggtcatcccagcttttcttcactggtttctaaattccgcagtcag
atcttggctatgtcccgctgtcagctctcacacacaatcctcactgagaaaaactggttt
cattatgcggctagaatttgggatggtgttaagaaatcatctgcgctctctgaatatagc
cgactactgtcatag
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