Onychostoma macrolepis: 131521873
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Entry
131521873 CDS
T09350
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omc01002
]
131521873 (col28a1b)
Peptidases and inhibitors [BR:
omc01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
131521873 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
131521873
NCBI-ProteinID:
XP_058602968
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Position
16:complement(5121724..5140699)
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AA seq
1124 aa
AA seq
DB search
MNESMAKGFFLCLLLWLLAPAARCQNRRQSGETLNLTTKQDNELVCTLEIAFILDSSESA
KGLLFDREKAFVRSFSKRVEQMQVSDWHLKTRMALIFYSSSVHIDQHFKDWQDLDVFLSR
LADVIYIGQGTYSTYAISNATQLFTSETKEQSVRVALLMTDGVDHPRNPDIMMAVTEAKG
HNIKIFTIGLSNLAKDNVNSAKLRVVASSPAQQYFHSLTDPKLEERLLQQLEIIAKNECP
RPPVCLCEKGERGPPGAPGKKGEQGYEGALGQKGSRGETGAPGLPGINGPEGRPGFKGDK
GDQGNCGPPGQKGHKGTEGPPGLRGPRGEQGLKGPPGDQGHEGLAGPKGDRGPIGASGPP
GDIGVGFPGPKGDKGNPGRPGLPGQVVIGQPGQPGPSGLPGAQGNPGAPGEGLPGPKGDR
GYVGTTGGRGPPGYGIKGEKGNAGPPGSSGPLGMPGRGIQGEKGNQGPAGPTGQRGNPGI
GLTGPKGEQGFPGERGAPGERGIGEPGPKGEPGLRGLLGEAGVPGEDGVMGPKGDIGLPG
PKGQDGPPGRGLPGEKGVRGERGSRGQPGPLGPVGPAGAKGEPGNVGVPGVSGPPGRGIP
GPKGDPGPVGPQGPAGEPGIGIAGPKGEIGLRGPIGPPGLKGEGYSGPPGLPGLPGLTGE
TGPEGTGLPGPKGDRGPPGSPGPAGAPGLGQVGPKGSIGQTGPAGPPGLPGEGIQGPKGA
PGYQGLQGPRGLPGEGLPGQKGDRGLPGAQGRKGDRGGQGEPGSTGPLGNTGRKGEPGLT
REEIIGLIRSICGCGRICRVRPLELVFVIDSSESVGPENFQVIKDFVNTLIDRASVSPEV
TRVGVVLYSHINLVVTSIQERLSRDEVKAAVRRMPYIGEGTYTGSGIRKANQIFRFARRG
VRKVAVVITDGQTDHRDTVKLEDAVREAHSANITMLVIGVVNQSDPIYDDFKQELKSIAS
PPAEEHVFSIEDFRMLPEVESKLLQEICENIDGSIFSTTSKPGAVGELFPYYDPKADGTD
IIGTIAPYLERDELNLLPDFSLTSLDRPEQDTYGTEPPLLIQDDFIADEGCLQPLDPGPC
REYVVKWYFDPKANSCAQFWFGGCQGNKNQFDTQQACRKSCVKM
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagcatggccaaagggttttttctgtgccttctgctttggctgcttgcacct
gcggccagatgccagaacagaagacagtctggagaaacactgaacctcaccacaaaacag
gacaatgagttagtatgcacactagagatcgcattcatcctggacagctcagagagtgcg
aagggccttctgttcgatcgagagaaagcgtttgtgcgctccttcagcaagcgagtggaa
cagatgcaggtgtctgactggcatctgaaaacccgtatggcgctcatcttctacagcagc
tcagtccatatcgaccagcacttcaaagactggcaggaccttgacgtcttcctgagcaga
ttggcggatgtcatctacatcggccagggaacgtattccacatacgccatatccaacgcc
actcaactcttcaccagcgagaccaaggagcaaagtgtgagggtcgccctgctcatgacc
gacggcgttgaccatccgcggaatcctgacatcatgatggcggtcaccgaggcaaaaggt
cacaacataaagatcttcacaattggcttatcaaacttggcaaaggacaacgtgaacagt
gccaaactgcgggtcgtagcgagcagcccagcgcagcagtacttccacagcctcactgac
cccaaactggaggaacggctcctgcagcagctcgaaataattgcaaagaatgaatgtcct
cggccaccggtgtgtttgtgtgagaaaggtgaacgcggtcctccaggagctcctggtaaa
aaaggagagcaaggttatgaaggagcacttggtcaaaaaggctcaaggggagaaacagga
gcacccggtcttccaggaatcaatggtccagagggaagacctgggttcaaaggtgataag
ggagatcaaggtaactgtggaccaccaggacaaaagggacataagggcaccgaagggcct
ccagggctgaggggccccagaggagagcagggtctgaaagggcctccaggagaccaagga
catgagggtctagcaggacctaaaggcgatcgagggccgattggtgcatctggcccaccg
ggagatattggagtcggattccctggtccaaagggagacaaagggaacccaggaagacca
ggtcttcctggtcaggtcgtcataggtcagccaggacaacctggtccttcaggtttacca
ggagcacaggggaacccaggagctccaggcgaaggacttcctgggccaaagggtgaccgc
ggctatgtcggaactacaggtggacgtggacccccaggttatggaattaaaggtgaaaag
ggtaatgcgggacctcctggatcatctggaccattaggaatgcctggcagggggattcaa
ggagagaaagggaatcagggaccagccggtcctactggtcaaagagggaatcctgggata
ggactcacaggaccaaagggagaacagggttttcctggagaacgtggagcccctggagaa
agaggaattggagaaccaggacccaaaggtgaacctggattacgaggtttactaggtgag
gcaggtgtaccaggagaagatggagtcatgggaccaaagggtgatataggcttaccagga
cccaaaggacaagacggacctcctggaagaggcctgccaggagagaagggggttcgaggg
gagagaggctccagaggccaaccaggaccattgggaccagttgggccagcaggggcaaag
ggagaaccagggaatgttggggttccaggtgtttctgggcctccaggaaggggcataccg
ggacctaagggagatccagggccggtcggtccacaaggtcctgctggagaaccagggata
ggcattgcagggccgaagggtgaaatagggttgcgaggacccattggacctccagggctg
aagggagaaggctattctggcccacctgggctaccaggtctgccaggtcttacaggagag
actgggccagagggaacaggtttacctggaccaaagggggatcgaggccctccaggttcc
ccagggcctgctggagcaccaggtcttgggcaagtgggcccaaagggctccattggtcag
actggtccagctggtcctccaggattaccaggagagggcatacaaggaccaaagggtgct
cctggatatcagggtttacaggggccaagagggcttcctggagagggtctgccggggcag
aagggggatcgtgggttacccggagcacaaggacgtaaaggagacaggggaggccaggga
gaaccaggatctacaggaccactgggtaatacaggaagaaaaggagaaccgggtctcacg
agagaggagataatcggcttaatccgatctatttgtggctgtggccggatttgcagagta
cggcctctggagctggtgtttgtgattgacagctcggaaagcgtcggcccagaaaacttt
caggtcattaaagactttgtgaacaccttgatcgaccgtgcgtcagtcagtcccgaggtc
acgcgagtcggcgtggttctctacagccacattaacctggtggtcacaagcatacaagag
cgcttaagtcgtgatgaagtgaaagcagccgtacgcaggatgccctacattggggagggc
acttacacaggaagtggcatcagaaaggccaatcagatcttccgctttgctcggcgtggt
gtgaggaaagtggctgtggtcatcacggacggccagacggatcatcgggacacggtgaag
ctggaggatgcggtcagagaggcccattcggccaatatcaccatgttggttataggagtg
gtgaatcaaagcgaccccatctatgatgattttaagcaggagctgaagtcaatagcatcg
ccacctgccgaagagcacgtgttttccatagaggacttcagaatgcttcctgaagtggaa
agtaaactgcttcaagagatctgtgagaacattgatggatcgatattcagcactacctcc
aagccaggtgcagttggagagttgttcccctactatgatcccaaagcagacggcactgac
attataggcaccatagcaccatatttggaaagagacgagctgaacctcctcccagatttc
tctctcacgtctttggatcggcccgaacaggacacatacgggactgagccgccgctgctc
atacaggatgattttattgcagacgagggatgcctacagcctctggatcccggtccgtgt
cgagagtatgttgttaaatggtattttgatccaaaagccaattcatgtgctcagttctgg
tttggaggttgccaaggcaacaaaaaccagtttgacactcaacaggcctgcagaaaatcc
tgtgtgaaaatgtga
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integrated database retrieval system
