Onychostoma macrolepis: 131522327
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Entry
131522327 CDS
T09350
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin isoform X1
KO
K27892
neural-cadherin
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131522327 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
omc04515
]
Cadherins
Cadherin related
131522327 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
EGF
Fibulin_C
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_4
hEGF
EGF_2
He_PIG
fn3
3keto-disac_hyd
Big_10
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
131522327
NCBI-ProteinID:
XP_058603725
LinkDB
All DBs
Position
16:8594810..8715158
Genome browser
AA seq
2794 aa
AA seq
DB search
MDRQSGRIDGIMRAHSRNPNFFRFPTACFLILFLAISNVHSAVFYGQIVEGAPPGTVVAG
FLFPLGDKCKELNLAGLKTVLTGEDSSDFSLEYLDNAGFVLKTTKTFNRGSKSSYTVCAR
LPRCSKTDEEVSVKIKILDKNNNTRQFNVTTDRIEILADVKSRVRKPRTVSEEVSYTVTV
SEDVKVGDLIFTVPDQKFEKKWFEVVSDGNSPVQMERDSGRVYLAYRLMSTAEVMVKIHN
MRGDEWYLCRLTLTLPNLSDLQWAMFPYPYLAAVGPDTGAGSVVYKLVARSGDGSVGTAH
FILVDGGEDSFEVDRATGEVKTTGRPLTPSKEYTLTVQAVDSQGRRGPHASVFILAGFRP
PQFTNTTYTIYIPESTGVGQAVAVVQAISFQRKTLSYMLLVNPSNLFSINQESGALSLTR
TVDFESGQHLHHLQVRASEPDTGLSNMAEVVVHITDENDCTPEFMHSIYSRDNVPETTPT
GTSLLQVLARDCDTGLNAELSYFIQSVDFDISSQGVVSPSQRLDYERPNHMYECTVVAVD
KGTPPRTGTASIRIRMANVNDEAPVFSQTVYKTFLSEDAGPETLVAIVHAKDPDGDGVTY
AITGGNEDSNFELDNQKGIIKLRRSPPPKLRGPQYVLNVTATDDNAAGGPLPLSSSAQVI
VGINDINNNKPVFDECNNYSVNALVLENQPPGTFVLHVQAHDADTGVNGEVKYGIMQRDG
ASPGFTINPDTGVISTAVSFDRERQREYTLSVTATDQAQEPLIGICQITVLIADQNDNDP
KFENSRYQYFLREDTPVGTSFLRAAAHDDDQGTNAAITYSLSQQNPAYFHINPSTGWIYV
NHPISQTSRISQQIIATDGGSRSSSVDLTVIITNVHNQPPQWEQAEYWVTIPENTPRDTK
IVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPNRRDGSASILVAENLDYETTRFF
TLRVRVQNVAAVPLASFTTVYVNITDVNDNVPFFMSSTYEATVPEGAEIGTSVAQVSATD
LDSGLHGMINYIILKDQSGDSQFFSINSYTGIIHTRATFDREQKGSYLIEVQSQDSSESA
RPGQQGQPNTDTAYVRVFVTDVNDNAPAFSQPVYEISVEEDKEVGFVVITVTANDEDEGA
NAKLRYQITSGNTMGTFDVEPEVGTIFIAQRLDYEQVQRYELRLVASDGKWENQTMVVIN
VINQNDEAPLFTQTEYHASVMEELTELPVLVLEVSATDPDQEADQRAVRYSLHGQGAGSE
FTIDEMNGRIFAQRHLDREVRSAWQFLVLATDENGAGLTGFADVLVEVQDINDNAPVFLC
ATDNCFLGHVPENSPADTSIMEMRATDLDDPKAGKNAILTYRIVQNVRNEINLNLFSINP
ATGTIYTVLRSLDREVVDRYLVVVEARDGGGLSGTGTATIIVSDVNDHPPVFTQRVYMAS
MPENLDINSEVVVVAATDGDEGENSVMTFSIIGGDEDRKFFIETDKVNRRGIVRLKKKID
FEKPHERTFNLTVKVEDADFFSLAYCIIQVEDSNDHAPVFFPQFYEAGSMFEDVPIGTIV
AQVTAMDLDSGQNGRFTYSIASESDPFQQFLVDKSGWVVVADSLDREKVSQHRLMILATD
MGSPALTGSAIVLVTVQDVNDNGPEFEAPYRPILWENTIAPQVVHMNDTSILLNVIDRDT
SSNGGPFSIRLLMLTSDVTNFNLTDLRNGSAMITALRSFDREQQKQYLLPILMIDSGSPP
MSSTSTLTVIIGDKNDHPHAPGHSEFIVYNLQGTLPTTVLGQVQSPDLDDWSEKVYKFEG
KPPRQFSLNQNTGQLSIREGTPAGFYSLQVRVADKSWPDVTSSAEVTVMELEEEALRNAG
SIRLANLTANEFFRISTNEESRYMRLRRLLSDLFQTDMENVDVFSLASGSQPAQHHLSVW
FAAHGSPYYKPEKLHGYVAMHKAKLESALGVTILQVGVDECTYAACGQTGGCSSKVTFSD
TPKTLNNGNVSLVSVSAKASAQCGCLAREGVHLHCSSYSYNPCLNGGTCVDSELGYRCKC
PPMFDGPECQQTKHSFLGNGYAWFPPIRPCFQSHISLEFITEAGNGLLFYNGPMGTPQPG
EKEDFIALELKNGVPVLSVNHGSGTLTLQLPTRATVTDRRWHHLDIISDGKTVQMILDHC
SGAMVNEVEGLGAEMFETDQSVCKASGETPGSERFLDVYQPLQLGGVKETHSLRRSHPHY
KGFVGCMRNLVVDSQVYDLGSAAESENSTPGCALTDGVCLTAGGPSCGVHGKCLGEWGSF
SCDCHPGYSGHKCDKALPEWSFEKDSVLRYQLRGGGSPRKTQAHFLLRTRSSMGSLLSMA
SRDANEFIILEIVDGYLTVRANLGDGAHSLKLTGHRVNLGQWVFVSLHRHDNIFTLRLEQ
GGGSREITGVLGQKKEIVVHPSSVFLGNSATPNTQGDFQGCMRDVRLNGHSLPLDSQGTE
FSTVLERRGVVPGCHSDACSAKPCLSPLYCVDLWRKHECRCPANQVAVVDEVTGLLHCAP
SPCGPTTCRNGGTCLAHSTKNYQCRCPEGFRGQWCEIGQVKSLRLAALSPSSILAISMCL
LVFFAVLVAVTVWNQKGSRNKFRKRGVYHIPAEHESWEDIRENILNYNEEGGGEQDQNAY
DITELKRPLCSSLSQSSSCTTAPLIKSSQGSQEEVHPCGNITNGATLPYHHNASCGGHCS
MDFKSYVSRIIWEADNDSLAFPMDTYHVYCIEGMGSSAGSLSSLGSAISEEAFSYDSLRR
WGSKFEGLSELYRRPELAIPYMDTVQSQSQEQQQ
NT seq
8385 nt
NT seq
+upstream
nt +downstream
nt
atggacagacagagtggcagaattgatggaataatgagggcgcattcacggaatccgaat
tttttcagatttcctaccgcatgttttttaattctttttcttgccatttctaatgtgcat
tcggctgttttttatggacaaattgtggaaggcgcacctcctggaactgttgtcgctggc
tttctttttcctctgggagacaaatgcaaagaattaaacttggctggacttaaaacagtt
ttgacaggggaggactcgtcggatttttcacttgaatatctggacaacgcaggattcgtt
ttaaaaaccaccaaaacttttaacaggggatccaaatcgagctatacagtgtgcgcgcgc
ttgccgcgctgcagtaagacagacgaagaagtgtcagtcaagatcaagatacttgataaa
aacaacaatacgcgacaatttaacgtaacaaccgacaggatagagattcttgccgatgtt
aaaagccgagttaggaagccaagaaccgtttctgaagaagtatcctacaccgttacagtt
tctgaagatgtgaaagtcggagatttgatctttactgtaccggaccagaagttcgagaag
aaatggttcgaggtggtttcggacggaaactccccggtccagatggaaagagactccgga
cgcgtgtacttagcgtatcgtttgatgtcaacagccgaggtcatggtcaaaatccacaac
atgagaggtgatgaatggtacctgtgccgtctgactctgactctccccaacctgtcagat
cttcagtgggccatgttcccctacccctacctggcagccgtgggccctgacactggtgct
ggctctgtggtctacaagctcgtggcccgaagtggcgatggctcagtgggaacagctcac
ttcattttagttgatggtggagaagattcatttgaagtggaccgagcaacaggagaagta
aagaccacagggcgacctctgacccccagtaaggagtacacactgaccgtccaggctgtg
gactcgcagggcaggaggggtccgcacgcctctgtgttcatactggccggcttccggccc
cctcagttcaccaacaccacctacacgatctacatcccagagagcaccggggtgggccaa
gcggtggcggtggtccaggctatctctttccagaggaagactctgtcttacatgctgctg
gtgaacccaagcaacctgttcagcataaaccaggagagtggcgcgctcagcctgacacga
actgtggactttgagagtggacaacatctccatcacctgcaagtcagagcttccgaacca
gatactggactgagcaacatggcagaggtggtggttcacatcacagatgagaatgattgc
acaccagaatttatgcactccatttacagtcgagacaacgtccctgagaccacccctact
ggcacatccttactgcaggttctggcacgggactgtgatacaggccttaatgcagaactg
tcctacttcatccagagcgtggactttgacatctcatctcagggagtggtgagccccagt
cagaggctggactatgagagacccaaccacatgtacgagtgcacggtggtggctgtggac
aagggaacgccccctcgcacaggcacagcctccatccgaatccgcatggccaacgtcaac
gatgaagcccctgtcttttcacagactgtatataaaacctttctttcggaagacgccggc
ccggagacgctagtggccattgtgcacgccaaagacccagatggggatggcgtaacatat
gccatcaccgggggtaacgaagacagcaattttgagctggacaaccagaagggcatcatc
aaactgcggcgtagtcctcctccgaaactgcgcggacctcagtatgtcctcaacgtcaca
gcgactgatgacaacgcagccggtgggccactccccctcagtagctccgcccaggtcatc
gttggcatcaatgacatcaacaacaacaagccagtatttgatgagtgcaacaactacagc
gtgaatgcactggtcctggagaatcagcccccaggaacttttgtgctgcacgtgcaggct
cacgacgccgatacaggggtcaacggggaggtcaagtacgggataatgcagagggacggg
gcctcacccgggttcactatcaaccctgacacaggtgttattagtacggcggtaagtttt
gaccgagagaggcagcgagagtacacactatcagtcacggcgacggaccaagcacaagaa
cccctcattggcatctgtcagatcactgtcctcatcgctgaccagaatgacaacgacccc
aaatttgagaatagccgctatcaatacttcctgcgagaggacacgccggttgggacgagc
ttcctgagggcggcggctcatgatgatgaccagggcaccaatgcagccatcacctactct
ctgtcccagcagaacccagcttactttcacatcaaccccagcacaggatggatctacgtc
aaccaccccatctcacagacatcacggatcagccagcagatcatcgctacagacggagga
agtcggagcagctcggtcgacctcactgtcatcatcaccaatgtgcacaaccagcccccg
cagtgggagcaggcggaatattgggtcacgatcccggagaacacaccccgcgacaccaaa
atagtgaccatcaaggcgacgtcccctcttggtgaccccagggtgacttacaacctggag
gaaggtcaggttcccgagaccaacatgcctgtgcgcttctacatcaagcctaaccggagg
gatggttctgcctctatcttggtggcagagaatctagactatgagacgacgcgtttcttt
accctccgagtacgtgtacagaacgtggcggctgtaccactagcttccttcaccactgtc
tatgtcaacatcacagacgtcaatgacaatgttccctttttcatgtcatccacgtatgag
gcgacggtcccagagggtgcggagattggcacatcagttgctcaggtctcagcaactgac
ctggactctggtctccatggaatgattaactacatcattctgaaggatcaaagtggtgac
tcgcagttcttcagcattaattcctacacaggcatcatccacacccgggccaccttcgac
cgtgaacaaaaagggtcctacttaatcgaggtccagtctcaggatagctcagagtcagcc
cgacccggtcagcagggccaacccaacacagacacagcctacgtgagggtttttgtcaca
gatgttaatgacaatgctccagccttctctcagcctgtatatgagatcagcgtggaggaa
gacaaagaagtgggctttgtggtcattaccgttacagctaacgatgaagatgaaggtgcc
aatgccaaactgcggtaccagattacctctgggaacaccatgggcacgttcgatgtggag
ccagaggttggcacgatcttcattgcccagcggctagactatgagcaggtgcagcgctac
gagttacggctggtcgcgtcggatggaaaatgggaaaaccagacaatggttgtcattaac
gtcatcaaccagaatgatgaggcacccctttttactcagactgagtaccacgctagcgtc
atggaggaacttacagagcttcctgtccttgtactagaggtctcagccactgatccagat
caggaggcggaccagcgtgcagtgcggtattctctacatgggcagggagctggtagcgaa
ttcaccatagatgagatgaacggtaggatcttcgcccaacgtcatttagatcgtgaggtt
cgctcggcctggcaattccttgtacttgccactgatgagaatggagcaggtcttactggg
tttgctgatgttctagtcgaagtgcaggatatcaatgacaacgcacctgttttcctgtgt
gcaacggacaactgctttttaggtcacgtgcctgagaactccccagcggacacttccata
atggagatgcgggccactgatctagatgatccaaaagctgggaagaacgctatccttacc
tacagaattgttcagaatgtgcgcaatgagatcaatcttaacctcttctccatcaaccca
gccactggcacaatttatactgttcttcgctctttggacagggaagtggtggatcgatac
ctcgttgtggtagaagctcgtgatggaggaggactttcaggcacaggaacagccaccatc
atagtttctgacgtgaatgaccatcctccagtgttcacccagagggtctacatggcctct
atgccagaaaacttggacatcaacagtgaggtagtggtagtggctgccaccgatggtgat
gaaggtgaaaattcggtcatgacatttagtatcattggtggagatgaagaccgcaaattc
ttcatcgagactgacaaggtgaaccgtcgtggcatagtgaggctaaaaaagaagattgac
tttgaaaagccacatgagcgcacattcaacttgacagtcaaagtggaggatgctgacttc
tttagcctggcctactgcatcattcaggtggaagactccaatgaccatgctccagtcttc
ttcccacagttctacgaggcaggatctatgttcgaagacgttccaataggcaccatcgtg
gcacaggtgacagccatggatctggactctggtcaaaatgggagattcacatacagcatc
gcctcagaatcagacccctttcagcagttcctggtggataagagtggttgggttgtggta
gctgactctctggacagggagaaggtgtctcaacataggcttatgatcctggccacagac
atgggcagccctgctctgactggctctgccatcgtgctagtgaccgtacaagatgtcaat
gacaatggaccagagtttgaggctccatatcggcccattctgtgggagaacactattgca
ccacaggtcgttcacatgaacgacacatccattctgttgaatgttattgacagagacaca
tcatccaatggaggacctttttccatccgtctgctgatgttgacctctgacgttactaat
ttcaacttgactgatctgcggaacggcagtgccatgataaccgctctacgcagctttgac
cgggaacagcagaagcagtatcttcttcccatcctgatgattgacagcggctctccacca
atgagctccaccagtacactcaccgtcataattggagataaaaatgaccatccccatgca
cctggacacagcgagttcatagtgtacaacttacagggtacactccctacgacggtgctt
ggacaggttcaatcccctgaccttgatgattggagcgagaaggtttacaagttcgaaggc
aaaccccccaggcagttcagcctgaaccaaaataccggtcagctgagcatccgagaggga
acaccagctggattttacagcctgcaggtgagggtggcagataagagctggcctgatgtc
acctcatcggccgaggtcacggtgatggagctggaggaggaggcgctgaggaatgctggg
tccatcagactggccaacctgactgcaaatgaatttttccgaatatcaacgaatgaggag
agccgatacatgcgtctccgccgcctcttgtccgacctcttccagactgatatggagaat
gttgatgtcttcagcctggctagtggcagccagccagctcagcatcacctcagcgtgtgg
tttgccgcccatggctcgccatactacaagcccgagaaactccacggctacgtggcaatg
cacaaagctaagttggagtctgctctgggtgtgaccattctacaggtcggggtggacgag
tgcacctatgcagcctgtggtcagacaggtggctgctctagcaaggtgacattcagtgac
acccctaaaacactgaacaacgggaatgtctctttggtgtctgtctcagccaaagcaagc
gctcagtgtggctgcctcgctcgagagggcgttcacctgcactgctcttcatactcgtac
aacccttgcctgaacggaggcacctgtgtggatagtgaactaggctacaggtgtaaatgt
ccccctatgtttgatggaccagaatgccagcaaaccaagcacagtttccttgggaatggt
tatgcttggttccctcccataaggccttgcttccagagccacatctctctggagttcatc
acagaagcaggcaatggcctgctgttctacaatggcccaatgggaacacctcagcctgga
gaaaaagaggacttcattgcactggagctgaaaaatggagttcctgtgctgagtgtcaat
cacggttcggggaccctaacactgcagctgcccacgagagccactgtcacggaccgccgc
tggcatcacctggacatcatcagcgatggcaagactgtgcagatgattctggaccactgc
tctggtgctatggtgaatgaggtggaaggcttgggagctgagatgtttgagactgatcag
tcggtgtgcaaggcctccggagagacgccaggcagtgaaaggtttttggatgtctaccag
cctctccagctgggtggggttaaagagacacactcactccgtaggtcacacccccattac
aaaggatttgtgggatgcatgaggaacctggtggtggacagtcaggtgtacgacctcggc
agcgcagcagagagtgagaacagcaccccgggatgtgccctaacagatggtgtgtgtctg
accgctggaggaccctcctgtggggtccatgggaaatgtctgggggaatggggctccttc
agttgtgattgccatcctggatatagtggacacaagtgtgacaaagcccttcctgagtgg
tcgtttgagaaagacagtgtgctgaggtaccagctgagaggtggaggaagtcctcgcaaa
acccaagctcacttcctactgagaacccgctcctccatgggcagcctgctcagcatggcc
tcacgtgacgccaacgagttcattattctggaaatagtagatgggtacctcactgtccgt
gctaaccttggggacggcgctcactctctgaagctaacaggtcatcgtgtgaacctcggc
cagtgggtctttgtcagccttcaccgccatgacaacatcttcaccctgcgactggagcag
ggtgggggttcgcgagagatcacgggggtcctgggtcagaagaaggaaatagtagttcac
ccctccagtgtgtttctgggaaacagcgccactccaaacacacagggggactttcaaggc
tgtatgcgggatgtaagactgaacggtcactctctgccgctggatagtcagggcacagag
ttcagtactgtgctggagcgccgaggagtcgtgcccggctgccactctgacgcctgcagt
gccaaaccctgcctgagtccactgtactgcgtcgacctgtggaggaaacatgagtgcagg
tgtccagccaatcaggttgcagtggtggatgaggtcacaggtcttttgcattgtgccccg
tccccctgcggccccaccacgtgtcgtaacggtggcacctgtttggctcactccaccaag
aactaccagtgccgctgtccagagggcttcaggggccagtggtgtgagatcggccaggtc
aaatctctccgtctcgccgcgctcagcccgagctccatcctagccatcagcatgtgtctg
ctcgtatttttcgccgtgctcgtggcagtgaccgtatggaatcagaagggcagccggaat
aagttccgcaagcgaggtgtttaccacatcccagcggagcacgagagctgggaggacatc
cgggagaacatcctcaactacaacgaggagggaggaggagagcaggaccagaacgcctat
gacatcaccgagctgaagaggccgctgtgttccagcttgtcccagtcctcctcctgcacc
accgccccactcatcaagtcgtcccagggctctcaggaggaggtccatccctgcggaaac
atcaccaatggagccacccttccctaccaccacaacgccagctgcggcggtcactgctcc
atggacttcaagagctacgtgtcgcgaatcatctgggaggccgacaacgacagcctggcg
ttccccatggacacctaccacgtgtactgcatcgagggaatgggctccagcgcgggcagc
ctcagctctctgggatcggccatttcagaggaggccttcagctatgactccctgcggcgc
tggggctccaagttcgaaggcctcagtgagctttatcgccgaccggagctggccatcccc
tacatggacacggtgcaaagccaaagccaggaacaacaacaataa
DBGET
integrated database retrieval system