Onychostoma macrolepis: 131522330
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Entry
131522330 CDS
T09350
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omc00535
]
131522330 (col14a1a)
Proteoglycans [BR:
omc00535
]
Extracellular matrix (ECM) proteoglycans
Others
131522330 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
DUF4959
VWA_3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
131522330
NCBI-ProteinID:
XP_058603730
LinkDB
All DBs
Position
16:21168489..21296517
Genome browser
AA seq
1862 aa
AA seq
DB search
MRVSGSRIKLWCPLISLALIQFFTPVSAQVPAPRRLRFKVLSAGKLLVSWKEPKGEYDGY
KFIYNSEPGGETTELQIARGENKAIIKDFNPRKEYSVKVIAVSGNLHSRALQGKYTAEDQ
SSDGDTTQPQRLKDPGPVDEGNEISGVDQFVCTTSAIADIVILVDGSWSIGRINFRLVRM
FLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTGL
ALTYILENSFKPESGARSDVPKIGILITDGKSQDDVIPPAQTLRSAGVELFAIGVKNADE
NELKAIASEPEETHVYNVADFSIMSTIVDGLTRKVCDGVEQQDKDIKRDSSTEETASPPR
DLVTSEVTAHSFRVSWTHAPDSVEKYRVVYHPSGADILEEIVVGGTENSVVLQNLNSLTE
YEIAVFAVYRSAASDALRGSEITLALPTVSDLEVYDVTDNSMRARWRDAEGASGYMILYA
PLSSETTDERELKVDESVTDVELTGMIPDTEYTVTVYAMFGEEASDPATVQETTMSLRPP
RNLRVTEVDHSSVRLNWDAVSSKVKGYRVVYVKTDGVQTSQVDLGPVTNVYLKNLSPLTE
YTVAVFALYNAGQSEALSGGFNTKLVPAPVSLMTSEVTSESFRVSWSHPARDVLVYKMAW
SPAEGGEEMEIMLNAAEDSFVIPDLSPFTEYKVSLSAIYKDETESSPVVVLENTLGWTTE
VPTTFPSTTAFVHLGVSNLWVDEETPFSMQVNWEVLDSDVEQYKVTYVSADRTEETVLVS
GNRRSVILQPLLSHTRYKITVTPIYADGESTALSKASTGKTLPLSGPSNLRVSDEWYNRF
RISWEGPQFPTLGYRVIYQPISVSGPALETFVRDDVNTLLILNLLSDTEYSVQVIASYTT
GSSQPLTGKGKTLFLGVKNLSTYQVLSSSLCAQWQPHRHATVYRVVIESLLNGQKQEVSV
GGGASRACFLSLSPNTQYKISVYTFLQDTEGPAVTTMATTAPAPTQPPTAPPTTIPPPTI
PPAKEVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIVQFSD
DARTEFKLSSYSDKEALLDAVQRITYKGGNTKTGRAIKHVKEAIFAEDAGVRRGIPKVLV
VLTDGRSQDDVNKISKEMQMEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFK
KIEEQLITFVCEAATATCPSMLMSGNTLAGFRMMEMFGLVEKHYSSVQGVSMEPGTFNSY
PCYRLHKDALVSQPTRYLHPEGLPSDYTISMLFRILPETPQEPFALWEILDKNNEPLVGI
ILDNGGKTLTFFNYDYKGEFQTVTFEGSEIKKIFYGSFHKLHVAISKTAAKVVIDCKTVG
EKSINAAGNITIDGVEVLGRMVRSRGRRDNSAPFQIQMFDIVCSTSWASRDKCCELPGLR
VEEDCPAMPHACTCAQDSKGPPGPSGPPGGPGIRGSRGDRGEPGLTGPQGPPGEIGPPGP
QGPPGPQGPNGLSIQGPPGASGEKGEKGEIGLPGPQGVPGASGGPGRDGPPGQRGLPGKD
GPQGRQGPPGPMGSPGAPGSPGPSGSTGQIGDQGAPGPAGAKGERGERGDMQSQAAVRAI
ARQVCEQLIQSHLSRYNSILNQIPSQSVSVRTVPGPPGEPGRSGPPGPQGEQGPSGRPGF
PGASGQNGRPGERGLPGERGEKGSPGIGTQGPRGPAGPPGPPGEGRTGSQGSPGRPGIQG
TSGRPGIPGSPGPAGPPGYCDQNSCIGYNVGVQQLPSNPYQNYGPATNYNNDEEEEEDPY
GGYRAYPPQYYQPSYPDPHAARFGPAHPGDTVGMRSPGTRRFSRSTTEEESVDELEVQVK
AK
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtcgggatcgaggattaagctgtggtgtccgcttatctcgctggcactgatt
cagtttttcacccctgtttcggctcaagttccagctccaagaagacttcgatttaaagtt
ctgagtgcaggcaagctacttgtctcatggaaggaaccaaaaggagaatatgatggctac
aaatttatatataatagtgaaccaggtggggaaacaaccgagttgcaaattgcaagggga
gagaataaagcaataataaaggattttaatcccaggaaggaatattccgtcaaggttata
gctgtgagtggaaacctgcacagccgagcacttcagggaaaatatactgcagaagaccag
agcagtgatggagacaccactcaacctcaaagactgaaagatcctggacctgtggatgag
ggcaatgagatctcaggagtggatcagtttgtctgcacaacttctgccattgcggatatt
gtcatcctggtcgatggatcctggagtattgggcgaatcaatttccgtctggttcgcatg
ttccttgaaaacctggttaatgcctttgatgtgggaatagacaaaacccggattggactg
gcccagtacagcggcgatccacggattgagtggcacttgaatggcttcagtacaaaagat
gcagtaatagatgctgtcaaaaacctgccgtacaagggaggcaacactctcacaggtctt
gctcttacctacatcctggagaacagcttcaaacccgagtctggggctcgtagcgatgtt
cctaaaattggaattctgataaccgacggcaaatcccaggatgacgttattccacctgct
cagaccctgagaagtgctggagttgagctatttgccattggtgtgaagaatgctgatgag
aacgaactgaaggccatcgcctctgaaccagaggaaacacacgtttataatgtggcagac
ttcagtatcatgagcactatagtagacggtctgaccaggaaggtgtgtgatggagtggag
caacaagacaaagatattaaacgagattcttccactgaagagacagcttctcccccccgg
gacttggtcacttctgaggtgactgcacacagttttcgtgtgtcctggactcatgcgcct
gacagtgtggaaaaatatcgggtagtttaccatccatccggagcagatattctggaagag
attgtggtgggcggcacggagaattcagtcgtcctgcagaatttgaactctctgactgaa
tacgagattgctgtgttcgctgtgtaccgcagcgcagcgagtgacgctctgagaggcagc
gagatcacgctggctctaccaacagtgagtgatctcgaggtgtacgatgtgacagacaac
agcatgagagcccgctggagggatgcagaaggggcttctgggtacatgatcctttacgct
ccactgagcagtgagactacagatgaaagagagctaaaggtggatgagtcggtgactgat
gtggaactgactggaatgattcctgatacagaatacaccgttacggtctatgccatgttt
ggagaggaggccagtgatcccgctactgttcaggagaccaccatgtccctgagacctcca
cgtaacctgcgggtcactgaagttgaccacagctctgtgcgactcaactgggacgcagtg
tccagtaaggttaagggctaccgtgtcgtgtatgtgaagacagatggtgtccagaccagt
caggtggatttgggtccagtcaccaatgtgtacctgaagaacctgtcacccttaacagag
tacaccgttgcagtttttgctctctacaatgccggccaatcagaggcgcttagtggcgga
ttcaatacaaagcttgtgccagccccagtcagcctgatgacatcagaggtgacctcagag
agtttccgggtcagctggtcacatcctgctagagatgtgctggtctataagatggcctgg
tcacccgctgaaggaggagaagagatggagattatgctaaatgcagctgaggactcattt
gtgattccagacctgagtccttttacagagtataaggtgtcactgtcagccatctataaa
gacgaaacggagagcagccctgtggttgtgcttgagaatacattgggctggaccacagaa
gttcccaccacttttccctccactacagcatttgttcatctgggagtgagtaacctgtgg
gtggatgaggagacgcccttcagtatgcaagtgaactgggaggtgctggactcagacgtg
gagcagtacaaagtgacatatgtcagtgcagaccgcacagaagagacagtgttagtctcg
ggaaacagaagaagcgtgatcctgcaacctctcctctcacacacaaggtacaagatcaca
gtgacccctatttatgcagatggagagtccacagctctgtctaaggcctctaccggcaaa
acactgccactttctggacccagtaatctcagagtgtctgatgaatggtataatcgcttc
cgcataagttgggaaggccctcagttccccactttgggttacagagtcatctatcagccc
atctctgtgtcaggtccggctctagagacatttgtaagggatgatgtgaacaccctgctg
atcctcaatctgttgagtgacacggagtacagcgttcaggtcatcgcctcctacaccacc
ggctccagccaacccctcaccggcaagggcaaaacattattcctgggggtgaagaatctc
agcacgtaccaggtgctcagtagcagcttgtgtgcccagtggcaacctcaccgccacgcc
accgtctacagagtcgtcattgagtcactgctcaatggtcagaaacaggaagtgagtgtc
ggtggcggtgcatccagagcgtgcttcctcagtctttcccccaacacccagtacaagatc
agcgtctacactttcttacaggacacagagggtcctgccgtcaccaccatggcgacaacc
gctccagcacccacccagccaccgaccgcaccacccaccaccatccctcctcccaccatc
cccccagccaaagaagtttgcaaagcagccaaggcagaccttgccttccttgtagatggc
tcctggagtatcggagatgacaactttcagaagattatccgtttcctgtacagcacaact
ggtgcgcttgatgtgattggccccgagggaacacaggtggccattgttcagttcagtgat
gacgccagaaccgagttcaagctcagctcctacagcgataaggaggctctgctggacgcc
gtgcagcgcatcacctataagggaggaaacaccaagacaggtcgagccattaagcatgtg
aaggaggccatctttgctgaggatgcgggcgtaaggaggggcattcctaaagtgctggtc
gtgctcacggacgggcgatctcaagatgatgtcaacaagatctctaaggagatgcagatg
gagggctacatcatctttgccattggcttcgctgatgctgactacggggagctggtgaac
attgccagcaaaccaagcgagagacatgtgttctttgtggacgatctggatgccttcaag
aaaattgaagaacagctcataacttttgtttgtgaggctgcgactgccacttgcccctcg
atgttaatgagcgggaacactttagctggcttccgtatgatggagatgtttggtttggtg
gagaagcactacagcagcgtgcaaggtgtctcaatggagcctggcactttcaatagctac
ccctgctaccggttgcacaaagacgccctcgtctctcagcctaccaggtatctacatcct
gaaggccttccctctgactacactatatctatgctgttccgcatactacctgaaactcct
caggaaccttttgcattgtgggaaatccttgacaaaaacaatgagccacttgtgggaatt
atccttgataacggagggaaaacattaacctttttcaattacgactacaagggagaattt
caaacggtgacttttgaaggaagtgaaattaagaagattttctatggcagtttccataag
cttcatgttgccatcagcaaaaccgctgccaaagtggtgattgactgcaaaacggtggga
gagaaatccatcaacgccgcagggaacatcaccattgatggagtagaggttctgggacgc
atggttcgctcacgtggaaggagagataactcagcgccgtttcagatccagatgtttgac
atagtctgcagtacatcatgggccagtcgggataagtgctgtgagctcccaggcttgaga
gtagaagaggactgtcctgccatgccccatgcctgcacttgtgctcaggacagcaaagga
ccacctggaccctcaggaccaccgggcggtcctggtatcagaggttcaagaggagatcgg
ggggagccaggcttgacggggcctcaagggccacctggtgagatcggacctccaggaccg
caggggccaccgggtcctcaggggccgaatggactgtccattcaggggccaccgggggct
tcaggagagaaaggagagaagggtgaaataggtctgccaggtcctcagggggtaccaggt
gccagtggaggaccaggtcgagatggacctccaggacagagaggcctaccgggtaaggat
ggaccccagggaagacagggcccaccaggaccaatgggaagccctggagctcctgggtct
ccaggaccaagtggatctacagggcaaattggtgatcagggggcacctgggcctgccggc
gccaaaggcgaacgaggagagagaggtgatatgcagtctcaggccgctgtccgtgccata
gcgcgacaagtttgtgaacagctaattcagagtcacttgtctcgctacaactctattctg
aaccagattcccagtcagtctgtttcggtacgaacagtaccaggtccaccgggtgagcct
ggtcgatcgggacctccggggccacagggagagcagggtccttctggcagaccaggattc
cctggagccagtgggcaaaatggccgtccaggagagagaggtctcccaggagaaagagga
gagaagggcagtccagggatcgggacacaaggccctcgtggtcctgcagggcccccaggg
cctcctggagaaggtcggacaggaagtcagggctctccagggagacctggaattcaaggc
acctcaggacgtccaggtatccctggtagccctggtcctgctggaccccccggttactgt
gaccagaactcctgcatcggatacaatgttggagtacaacagttaccctccaacccctac
caaaactacggccccgccaccaactacaacaacgatgaggaggaggaagaggacccttac
ggtggctaccgtgcctaccctccacagtactatcaacccagctatcctgacccccatgcc
gccaggtttggccccgcccaccctggtgacacggtggggatgaggtcacctggcacgcgt
cgcttctcccgcagcacgaccgaagaggagagcgtcgatgagttggaagtgcaagtgaag
gccaaatag
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