Onychostoma macrolepis: 131522374
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Entry
131522374 CDS
T09350
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131522374 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131522374 (cnot3a)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131522374 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131522374 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
131522374
NCBI-ProteinID:
XP_058603813
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All DBs
Position
16:13158144..13167029
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AA seq
902 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEETEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKAVYRVCLQKQDRIEELKR
LIERHRYHIRMLETILRMLDNDSIQVDAIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDL
EDIPATLMATSPQGHIEDEMFLQSSSTPTSTTSSSPIPPSPATGTMEILEDKRGRSTDSE
VSQSPVKNGNPSLSSFSSSASSGSSSSSSSLVSMATVVGGCTAVSGGSSLLGSFSSAVQQ
HAPQSQQQAQVKLSSTSVPSNNTPSPPSHPTLPVSTTSSLPSSSTPGPVTSNSQSQASSV
PGVEGSRLGLGLGKGGVTVTSSSSGAQMSGLGLTGLSGSLNTMAGLLSGSTPAPYAQAAA
GGTAGSVSSGPVGSGSVSSGISLPSTGAGGANTGATSNGTGTGSGMGLLGSSSGHSALSG
GILNLVPGQTALQGSAQIPVSLVGTAPVGGTGESGLGGNGSSSVASAGVGTNVAPARPPS
GLKQNGATSYSAVVADNTPDSSLSSASQSQNSHSSSSSSSTSQTLDNGPSLLSSITLPPS
SPSPAFTDSTPGGGSLLNGPHSYTLNTETIKAPEPPSSLKAMAERAALGLTLDGEISSLH
LPDRAPPGPTTAPQPAVSEVNLPPSLGACPLGPTPLNKEQLYQQAMQEAAWTHMPHPSDS
ERIRQYLMRNPCPTPPFHHQMPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKAL
KKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRD
LQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaactacaaggtgaaatagatcgatgtttgaaaaaagtcgctgaa
ggcgtcgaacagtttgaagacatttggaaaaaacttcacaatgcagccaatgccaaccag
aaggaaaaatacgaggctgatctcaagaaagaaattaaaaagcttcagcggctacgagac
cagattaagacatgggtggcatccaatgagatcaaagacaaacggcagctagtggagaac
cggaaacttattgaaacgcaaatggagcgatttaaggtggttgaaagagaaaccaagaca
aaggcctactctaaagaggggctgggcttggctcagaaagtagacccagcacagaaagag
aaggaggaaacggaacagtggctcacgaacacaatagacactttgaacatgcaggtggac
cagtttgaaagtgaagttgagtccctctctgtccaaacacggaaaaagaaaggagacaag
gagaaagctgtttatcgtgtttgtcttcagaagcaggatcggattgaagaactaaagagg
ttaattgaaagacaccggtaccacattcgtatgctagagaccatcttgaggatgttggat
aatgattcaatccaggttgatgctatccataagatcaaagatgatgtggaatattacatt
gactcttcgcaagacccagactttgaagagaatgagttcctctacgatgatctggacttg
gaggacataccggcaactttgatggcgacgtctcctcagggccatattgaagatgagatg
ttccttcagtccagcagcacgccgacctccaccacttcctcttcccccatccctccatct
cctgccacaggcacaatggagattttggaggacaagagaggtcgatcgacagacagtgaa
gtcagtcagtctcctgtgaagaacgggaacccatctctctcgtccttctcctcatccgcc
tcctcaggctcctcctcctcctcctcttcgctggtttctatggctactgttgtcggtggc
tgcacagcggtctctgggggcagcagcctgctgggaagctttagcagcgcagtgcagcag
catgctcctcagtctcaacagcaagcacaggtcaaactctcctcgacatccgttccctcc
aacaacacacctagtccacctagccaccccacgctacctgtctccactacttcctctctg
cctagttccagcacacctggcccagttacttccaattcccagtcccaggcttcatctgtt
cctggggttgagggctctagactgggtttgggcctggggaaaggaggtgtgacggtgacc
agcagcagtagtggggctcagatgtcaggtctgggcttgaccggcttgtccggttctctc
aacaccatggcagggcttctctcaggctctacccctgccccctatgcccaggcggctgca
ggtggaacagcaggtagtgtctccagtggtccggtggggagtggcagtgtaagttctggc
atatctttacctagcacgggtgcagggggagcaaacacaggtgcgaccagtaatggtacg
ggtacagggtctggtatgggcttgctagggtccagttcgggtcacagtgccctatccgga
ggaattctaaacctggtaccggggcagacggctctccaggggtctgcacagatacctgta
agccttgtaggcacagcacctgtaggaggaactggagagagtggattggggggaaatgga
agcagttctgtggcgagtgcaggagtggggacgaacgtagcgcctgcaagaccccctagc
ggcctcaaacaaaatggagcaaccagttacagtgctgtggttgcagacaacacaccagac
tcctcgctcagcagtgccagccaatcacaaaacagccattcctcatcttcgagctcatca
accagtcaaactctggataatggccccagtttattgagttctatcactctacccccctcc
tccccatcacctgctttcactgacagcacacctggtggtgggagtctattaaacggccca
cactcctacacactcaacacagaaaccatcaaggctcctgaacctccaagctctttgaaa
gctatggcagaacgggcggcactgggattgacactggatggagagatttcatcactacac
ctcccagatcgagccccacctggacccacaacggctcctcagcctgctgtttcagaggtc
aacctgccgccatctttaggggcgtgtccgttaggccccacccctctcaataaagagcag
ctataccaacaggcaatgcaggaggcagcatggacacacatgccccacccgtctgattca
gagagaatcaggcagtacctgatgagaaacccctgtcctacaccgccattccaccaccag
atgcccccacatcattcggactctattgagttctaccagagattgtccactgaaacgctc
ttcttcattttctactacctggagggcacaaaggcacagtacctgtcggctaaagcactg
aagaagcaatcgtggaggttccacaccaaatacatgatgtggttccaacggcacgaggaa
cccaagaccatcactgatgagtttgaacagggcacgtacatttactttgactatgaaaag
tggggccagagaaaaaaggaaggatttacgtttgagtacagatacctggaggacagagac
ctgcagtga
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