Onychostoma macrolepis: 131522533
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Entry
131522533 CDS
T09350
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131522533
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
131522533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
RuvA_C
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
131522533
NCBI-ProteinID:
XP_058604049
LinkDB
All DBs
Position
16:32948218..32959852
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AA seq
583 aa
AA seq
DB search
MQSRCYHQPTGLGQDGPDLHDLQMKVDFFRKLGYSPQEVKAALRKLGLGTDTNAVLGELV
RSGAKAVPSSSSDSDDGGFSLPHRGGSSSRAQGSTLEDTTEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQRILEELERKKFLV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKAMLLDHKRQLCPYGKKCTYGIKCKFYHPERTNQS
QRSLADELRENARLSGSKEESRVTGPLRGMYPRNDPGFGSSAPSLEQELEQKLNLNPKSS
DGRDVMLQYWEDILSTKKPLNTTTVGQRSASIDRTSLQAPYPTNPSSIFSSDSGLGSYES
QFSDPSQSIELHRTRYNHPPMSGNLGVPAGGQHYYDNTSHFSNYQPNFGAYSSLPLPNPI
QRHSLPAYGAWSYPYFLAQATSLPEPLPCPSSHRSPDVYGNQQHSAMPQSSAFQEEREEV
RKKLHAIFNPHHVNKVMEMFPQLKDAQQLAAEILKLKSRGEFF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaggtgttaccatcaacccactggcctgggccaagatggacctgacctccat
gacctgcagatgaaggtcgacttctttcgtaagctgggttactctccacaagaggtgaag
gccgccctgaggaagctcggcctggggacggacaccaacgcggtgctgggggagctggtg
cgttcaggggccaaggcagtgccctcctctagctctgacagcgatgatggtgggttcagt
ttgccccatcggggaggaagctcatctagggcacagggctcaacgctggaggacaccact
gaacccgaaagtgacctcaagcctattgttattgatggcagcaacgtggccatgagtcat
gggaacaaggaagtgttttcctgccgtgggattgagctggcagttaattacttccttgac
cgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcct
gatgtacctatttcagatcagcgtattttggaggagctggaaaggaagaagtttcttgtg
tttacaccttcacgaagggtcggaggaaagcgcgtggtctgctatgatgatcgctttatt
gtcaaattagctcatgatctggatggcattatagtgtccaacgacacatatcgtgacctg
caaagtgaacgtccggagtggaagcgttgcattgaggagagattgcttatgtactccttt
gttaatgacaagttcatgccacctgatgaccctctcggccgtcatggacccaatttagat
aattttcttcgtaaaaaagcgatgttgcttgaccacaagcgacaactctgtccatatgga
aaaaagtgcacatatgggatcaagtgtaagttctaccaccctgagcgcacaaaccagtca
cagcgttctctagccgatgagcttcgagagaatgccagactgtctggttcaaaagaggaa
agcagagtaactgggccactaagaggcatgtacccaagaaatgaccctggttttgggtcc
agcgcaccctccttggagcaagaactggaacaaaagctcaacttgaatcccaagagctct
gacggcagggatgttatgctccagtactgggaggacattttgtccaccaaaaagccctta
aatacaaccacagtgggacaacgcagtgcttcgatagacagaaccagtctgcaagcacct
tacccaacaaacccttcgtctattttcagttctgactcagggctaggatcctatgaaagc
cagttttcagatccgtcccagagcattgagttgcataggacgagatacaatcatccacca
atgtctggtaaccttggtgtacctgcaggtggccagcactactatgacaacacgagtcat
ttctccaactatcagcccaactttggtgcctacagctccctacctctgcccaaccccatc
cagcgtcatagtctccctgcttatggtgcctggtcttacccttacttcttagcacaagca
accagtttacccgaacctttaccctgtcctagctcgcacaggtctcccgatgtctacgga
aaccagcagcactcagccatgccacagtccagtgctttccaggaagaaagagaggaggtc
aggaagaagcttcatgcgatttttaacccacatcatgtaaacaaagttatggaaatgttc
ccacagctgaaagatgcgcagcagctagcggcagagattctcaaactcaagtccagagga
gagttcttctga
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