Onychostoma macrolepis: 131522717
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Entry
131522717 CDS
T09350
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131522717 (scaf8)
03041 Spliceosome [BR:
omc03041
]
131522717 (scaf8)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131522717 (scaf8)
Spliceosome [BR:
omc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131522717 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131522717
NCBI-ProteinID:
XP_058604354
LinkDB
All DBs
Position
17:27440246..27522312
Genome browser
AA seq
1298 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIINTFQNLYRCPADDKSKIVRVLNLWQKN
NVFKSDIIQPLLDMAAGLPPPSVTPVSASSAVPVNSTTPGTPATPATPANIVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFGNESEHSEDSKKDATSQLPVVPESINNSIFH
QLAEHLQQQNLEQFQKQLMEHQQHQQKSMTMESQDTIFGPENSAAPGQSSAPPQLPEQEA
KMDDSIDNQQQDMDIDEGQDTVDEELFEAEEKKTSSTRSRTLSRSRSRSPKRRRSRSRSG
SRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSRVLSVCSTTLWV
GQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRALQKLSTGSYKIGS
KVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNNEWES
QRNTETAKETQSQAVTAETSTASSTPSEAFTQPVTMMPLQIPVAQTVPAVGLVPPSFPVT
MAMPPPGFGPPPPFLRAGFNASQPPPGFMATPGVGPSAVGTSLASAQTSLVQPSLPTTQE
NSKDSPFGAMIPPTSTIPGSFIPSAMPGAGVFNPVGAQHQQSSTDKTPQLAETMETASEI
TLQGMQNAVRSGMGLLGMHPSASLTHPLSGQRMAGLLPLELRPNLLQGPGGRFPLLMQPG
LAHQTNNVLDASLQAQARVRVPFSQMEQFNRAEGTFARAPNPSSAGADSLAKTDNETPPR
SDVGSQQEGDQDYRFPPPEKQSTGLLKTPPLEMRTEPVPARPPLLERPPRTVLQAEGREG
RRENMSGCFRAESRWGPPRGDFDERDMRGMSGGPPKGFQEDRSNPNFQNRFEGRSGSSSG
PAWNRGTGPSFNANMHQDYDDRRRPWERQKDRDDRDMDFRGEMNGNRHSRERDRDRERER
DRNRDRERGRERNRERDRERERERDRERENEKDKERWTPLSSQSQPQPLLPKSQPLLPLP
TPLVAQPQAQEQAQMKSPSPPVPQHQPHPEPQPTVRDAELQPDVTPELQSQPKSLSPPEE
TARSQEQEGASCVNGMETDSKPQLNILEPASQSAAEPSRSPSPSLTATPTCFQNEPLKGE
KTPEMSVSSSVDADTEQTGPKVNAETEPELEKTDTEET
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaggcgtttaacggcgagctgtactcactgaatgaatacaagccaccg
atctccaaagcaaagatgacccagattacaaaatcagcaattaaagctataaaattctac
aaacatgtcgtccaaagtgtggagaaattcattcaaaagtgcaagcctgaatacaaagtc
cccggtctgtacgtcattgactccattgtgcggcagtctcgtcaccagtttggtcaagag
aaagatgttttcgctccacgcttcagtaagaacatcattaacacgttccaaaacctctac
cgctgcccagctgatgacaagagtaagattgtccgagtactaaatctatggcagaaaaac
aatgtcttcaagagtgacatcatccagcctctactggatatggccgcagggctcccaccc
cccagcgttacgcccgtctctgccagcagtgccgtacccgtcaacagcactactcctgga
accccagcaactcctgccactccagccaacatagtgcagagtctcccagactgggcgtct
cagatctccaacacagacacagtggctgcggtcgcccagatcttacagagtccccagggc
cagcagttgcagcagcttgttcagagcctccagatgcagcagcagaaacctcagccctct
ctgctgcaggcgctggatgcaggtttggtggtgcagctgcaggcccttactgcacagctc
actgcagccgcagcagccaacacactcaacccactggagcagagagtttcctcatttaac
aagaagctgttgggtcagtttgattttgggaatgagtcggaacacagcgaggattctaag
aaagatgctacatctcagttacctgtggtgccagagtccatcaataactcaatatttcat
cagctggccgagcatcttcagcagcaaaaccttgagcagtttcagaagcagctaatggag
caccagcagcatcaacagaagtctatgaccatggagagccaggataccatctttggtcct
gaaaattcagccgctcctggccagagcagtgccccaccacagctcccagaacaagaagca
aaaatggatgactccattgataaccagcaacaggacatggatattgatgagggacaggat
actgtagatgaggagctctttgaggctgaggagaagaaaacaagcagcacccgttcaaga
acactttcgagatctcggtccaggtcacctaagagaaggaggtcaaggtctcgctcaggg
tctcgaaagcgcaaacacaggaagagatcacggtctcgctcaagggacagaaagaggaag
tcctcacgttcttattccagtgagcgacgagcacgggaaagagaaaaggaacggcagaaa
aaaggacttcctcctatccgctcaagggttctaagtgtttgcagcactactctatgggtt
ggccaagtggacaagaaagccacccaacaagatcttactaacctcttcgaagagtttggc
cagattgaatctatcaatatgattcctcccagaggctgtgcttacatctgtatggttcat
cgtcaggatgcatatcgtgcccttcagaaactgagcacaggctcctacaaaatcggttca
aaggtcatcaaaattgcttgggccctcaataaaggggtgaaacaggagtataagcagttc
tgggatgtggaccttggggtgacttatatcccatgggagaaggtcaaactggatgatctg
gatgactttgcagagggaggcatgattgaccaggagaccgtcaacaatgaatgggaatcc
cagagaaatactgagaccgccaaagagactcagagccaggctgttacagctgaaaccagt
acagcaagcagcacacccagtgaggcctttacccagcctgtcactatgatgcccttgcag
attccagtggcacagacggtccctgctgttggccttgtgcctccatccttccctgtcacc
atggcaatgcccccaccaggctttggtcccccaccaccatttctaagggcagggtttaat
gcctcacagcctcctccaggtttcatggccacgccaggagtaggaccgtcagcagttgga
accagtcttgcttcagctcagacctctctagtgcagccttcgttgccaaccactcaagag
aacagcaaggattctccgtttggagccatgattcctcccaccagtactattcctgggagt
tttattccgtcagcaatgcccggggcaggagtctttaaccctgtgggagcacagcatcag
cagagcagcacagacaaaacacctcagttggcagaaacgatggagacagcttctgaaata
acactacagggaatgcaaaatgcagtgcgcagtggaatgggtctcctcggtatgcaccct
tctgcatctctaacacatcctctgtctggccagaggatggcagggctgcttcccctggaa
ctgcgacccaacctgctccagggtcctgggggccgcttccccctgctcatgcagccaggc
cttgcacatcagaccaataacgtcctggatgcttcacttcaagcccaagcccgcgttcgg
gttccattctctcaaatggagcagttcaaccgtgctgaaggcactttcgcaagggcacct
aacccttcatctgctggagctgacagtctggccaagactgataatgaaacaccacccagg
tcagatgtaggttcccaacaagaaggagatcaggactatcgctttccaccaccagagaag
cagagcacggggttgttgaagacgcctcctttggagatgcgtactgagcctgtgcctgcc
agacctcctttactagaacgacctccgagaacagtcttgcaagccgaaggtcgagagggt
agaagagaaaatatgtccggatgtttcagggcagaaagtcgctggggaccacccaggggg
gattttgacgagcgagacatgagggggatgtctggtggacctccaaagggtttccaggag
gatcgttccaaccctaactttcagaatcgattcgagggccgcagcggaagttcatcagga
cccgcttggaatcgcggaactgggccttcttttaatgccaacatgcaccaggactacgat
gatcgtcgcagaccttgggaaagacagaaggaccgagatgacagggatatggacttccgg
ggtgaaatgaacggcaatcgtcatagccgggagcgagacagagaccgcgaaagggagagg
gacaggaatcgggaccgtgaacgcggcagagagcggaatcgcgagagagaccgagaacgg
gagcgtgaaagggacagagagagggagaacgagaaggacaaagagcgctggacacccctt
tcttcacaatctcagcctcaaccgttgcttcccaagtctcagccgctgctccctctgccg
acccccttggtcgctcagcctcaagcacaagaacaagcgcaaatgaagtcgccgtctccg
ccagtgccccaacaccagcctcatccagaaccacaaccaacagtacgagatgctgaactg
caaccagatgtaacgccagagctgcagtcacagcccaagtcactcagcccccctgaagag
accgcaagaagtcaagagcaggagggagcgtcatgtgtcaatggaatggagaccgattca
aaacctcagctaaacattttggaacctgcatcccagagcgctgcagagccctctcgtagc
ccctctccatcccttaccgccacacccacctgcttccagaacgagcccttgaaaggagag
aagaccccagaaatgtctgtttcctcctctgtggatgcagacactgaacagactgggcca
aaggtgaacgctgagactgaacctgagctagagaaaacagacactgaggaaacataa
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