Onychostoma macrolepis: 131522950
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Entry
131522950 CDS
T09350
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131522950 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131522950 (ndc1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131522950 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Curto_V3
Motif
Other DBs
NCBI-GeneID:
131522950
NCBI-ProteinID:
XP_058604824
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All DBs
Position
02:complement(17662584..17675685)
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AA seq
671 aa
AA seq
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MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPVTTAVFVLLSRFSLFHPIQWISDCTSLLT
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGAPCRQSESGEVVTCLNEYHLFLLLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLPMVVKCSVIQALYSARNFAALYFFFGYVPKTWISSTLNLQ
IDSSLQPLDSLTGLLDFSLLYHLSISGTFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQCLPKVLVEKNTFVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHPHNWNAISRECL
SLLSELTQRLVAHQDAVASNGRVKSQSASSDTRSASSSSSVVSGTEDIAETPRLSVPLRT
PGSVFKSSVGGANSALTAPFTPDVDSPFSSPAIRRLVGQQDPQSPWFGTVQSPHIMRRGP
KLWSASTECQSNGSPPASPATVSSPPAASQKPSFLAQWLQNRKEQVKSFLAKRVLIMYLF
NKLPEASSQALFADCQAHIWALQGLSHLVAASFSEDQFGVVQTTLPSILSCLVVLLEAVD
RHFKLPHASSKPGRTICSMGDSTYKTLRFALRAALKTSIYKITTTFGEHLIAVNISTEHR
KRLQQFLEFKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgctgaaacagaattcttggtttataagaaaggttgtgatatggagggcggtg
gcgagtattgcatggtcagtgctgctcttgcccgtcacaactgcagtctttgtgctcttg
agtagattcagcctgtttcaccccatccaatggatttcagattgcacaagccttcttacc
gcctcaagcaccatcttttcccttgtggtgctgtgtggggtggttttgatcactggcttt
tttaacctagagttctacactttggttccctctattccatgttcacgcatggctctcctg
gggacggtgctccaccctcgacaatgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgtgcttctgttaccatcggtggacgttacagcactctaggagctccc
tgcaggcaaagcgagagcggtgaagtagtgacctgtctgaatgagtatcatctctttctt
ctcctggctggagccttcatgggatacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccgcggttcaagggctgtctg
ccaatggtggtgaagtgcagtgttattcaggccttatattcagccaggaattttgctgct
ctctatttcttttttgggtatgttcctaagacctggatctccagcacacttaatctacag
atagacagttcactccaaccactggattcattgactggacttctagacttctccctcctt
taccacttgtcgatcagcggcactttcctgtatctaacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacgtttactgaggat
gcagagcagtgtcttcccaaagttttggttgagaagaacacttttgtcatgaagtttttg
gctctgcaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agcctgagtcagccaggtggtcaccctcataactggaatgccatcagtagggaatgtctg
tctttgctgagtgagctgacacagagactggtggctcatcaggatgcggttgcctctaac
ggccgagtcaagtctcagtctgccagcagtgacaccagatcagcctcttcaagcagctca
gtggtgtccggaacagaggacattgctgagacccctcgactcagtgtcccgctaaggacc
ccaggttcagtcttcaagtcatcggtggggggtgcaaacagcgctttgacggctcctttc
accccagatgtggacagccctttctcttcccctgctattcgacgtctggttggccaacag
gatccccagtctccctggtttggtacagtacaaagcccccatattatgaggagagggccc
aaactgtggagtgcctccacagagtgccaatccaatggcagtcctcctgcctcccctgcc
actgtttctagtcctcctgcagccagtcagaaacccagctttctggcccagtggctacag
aacagaaaagagcaggttaaaagctttttggcaaagcgggtgctgataatgtatttattt
aacaagcttccagaagcctctagccaagctctgtttgctgactgccaggctcatatctgg
gctctccaaggactgtctcatttggtggcagcctctttctctgaggatcagtttggagtt
gtgcagaccacattacccagtattcttagctgtttggtagtcttgctagaggctgttgac
agacacttcaaactgccacatgcctccagcaaacctgggaggactatctgcagtatggga
gactccacctacaaaactctaaggtttgcgctgagggctgcgctgaagacctccatctac
aagataactaccacttttggagagcacttgattgctgtgaatatttcaacagaacataga
aaaaggcttcagcagttcttggaattcaaggaatag
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