KEGG   Onychostoma macrolepis: 131522950
Entry
131522950         CDS       T09350                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
omc  Onychostoma macrolepis
Pathway
omc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    131522950 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omc03019]
    131522950 (ndc1)
Messenger RNA biogenesis [BR:omc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     131522950 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup Curto_V3
Other DBs
NCBI-GeneID: 131522950
NCBI-ProteinID: XP_058604824
LinkDB
Position
02:complement(17662584..17675685)
AA seq 671 aa
MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPVTTAVFVLLSRFSLFHPIQWISDCTSLLT
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGAPCRQSESGEVVTCLNEYHLFLLLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLPMVVKCSVIQALYSARNFAALYFFFGYVPKTWISSTLNLQ
IDSSLQPLDSLTGLLDFSLLYHLSISGTFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQCLPKVLVEKNTFVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHPHNWNAISRECL
SLLSELTQRLVAHQDAVASNGRVKSQSASSDTRSASSSSSVVSGTEDIAETPRLSVPLRT
PGSVFKSSVGGANSALTAPFTPDVDSPFSSPAIRRLVGQQDPQSPWFGTVQSPHIMRRGP
KLWSASTECQSNGSPPASPATVSSPPAASQKPSFLAQWLQNRKEQVKSFLAKRVLIMYLF
NKLPEASSQALFADCQAHIWALQGLSHLVAASFSEDQFGVVQTTLPSILSCLVVLLEAVD
RHFKLPHASSKPGRTICSMGDSTYKTLRFALRAALKTSIYKITTTFGEHLIAVNISTEHR
KRLQQFLEFKE
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgttttcgctgaaacagaattcttggtttataagaaaggttgtgatatggagggcggtg
gcgagtattgcatggtcagtgctgctcttgcccgtcacaactgcagtctttgtgctcttg
agtagattcagcctgtttcaccccatccaatggatttcagattgcacaagccttcttacc
gcctcaagcaccatcttttcccttgtggtgctgtgtggggtggttttgatcactggcttt
tttaacctagagttctacactttggttccctctattccatgttcacgcatggctctcctg
gggacggtgctccaccctcgacaatgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgtgcttctgttaccatcggtggacgttacagcactctaggagctccc
tgcaggcaaagcgagagcggtgaagtagtgacctgtctgaatgagtatcatctctttctt
ctcctggctggagccttcatgggatacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccgcggttcaagggctgtctg
ccaatggtggtgaagtgcagtgttattcaggccttatattcagccaggaattttgctgct
ctctatttcttttttgggtatgttcctaagacctggatctccagcacacttaatctacag
atagacagttcactccaaccactggattcattgactggacttctagacttctccctcctt
taccacttgtcgatcagcggcactttcctgtatctaacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacgtttactgaggat
gcagagcagtgtcttcccaaagttttggttgagaagaacacttttgtcatgaagtttttg
gctctgcaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agcctgagtcagccaggtggtcaccctcataactggaatgccatcagtagggaatgtctg
tctttgctgagtgagctgacacagagactggtggctcatcaggatgcggttgcctctaac
ggccgagtcaagtctcagtctgccagcagtgacaccagatcagcctcttcaagcagctca
gtggtgtccggaacagaggacattgctgagacccctcgactcagtgtcccgctaaggacc
ccaggttcagtcttcaagtcatcggtggggggtgcaaacagcgctttgacggctcctttc
accccagatgtggacagccctttctcttcccctgctattcgacgtctggttggccaacag
gatccccagtctccctggtttggtacagtacaaagcccccatattatgaggagagggccc
aaactgtggagtgcctccacagagtgccaatccaatggcagtcctcctgcctcccctgcc
actgtttctagtcctcctgcagccagtcagaaacccagctttctggcccagtggctacag
aacagaaaagagcaggttaaaagctttttggcaaagcgggtgctgataatgtatttattt
aacaagcttccagaagcctctagccaagctctgtttgctgactgccaggctcatatctgg
gctctccaaggactgtctcatttggtggcagcctctttctctgaggatcagtttggagtt
gtgcagaccacattacccagtattcttagctgtttggtagtcttgctagaggctgttgac
agacacttcaaactgccacatgcctccagcaaacctgggaggactatctgcagtatggga
gactccacctacaaaactctaaggtttgcgctgagggctgcgctgaagacctccatctac
aagataactaccacttttggagagcacttgattgctgtgaatatttcaacagaacataga
aaaaggcttcagcagttcttggaattcaaggaatag

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