Onychostoma macrolepis: 131523154
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Entry
131523154 CDS
T09350
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131523154 (samd4a)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131523154 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
131523154
NCBI-ProteinID:
XP_058605239
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All DBs
Position
17:7793257..7840182
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AA seq
688 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHVLER
EANNPVVISQWQSEPKERVISLVLTHLPLLKPGNVEAKVEYMSLLPKILGHTIEHGRHLE
ESRQLLSYALIHPATSLEDRGNLALWLNHLEERAAARGAGDSLERVPSSHHGQPPHLYPH
HQRYGSDDRLNGWQSSRDSGLGSWQQQQQGCENGHLSLYPSSSVPSTINAVGTGSGTNTI
TAHVSFLAVLSGGQHSPLRRSVSLTPPMSGGSNQPLGHGWLSQEDLRPRGPAPDHAPISP
QSSVASSGSGGSEHLEEHAAVRSTFHEEGSGMRDVPAWLKSLRLHKYAGLFSTMTYDEMM
SLTEQQLEAQQVTKGARHKIIISIQKLKDRQNVLRCLEKDILEGGNLRAPLQELHQIIQT
PIKVCSTEESSQRHLLSAEGKSSIASSHLGGGETEGSSTVIAEGDIPAQFTRVMGKVCTQ
LLVSGSDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQVQFRSISRKTLLDLTGQ
RRSSRYGQSNSLPTTGCVGSGVPTRRNLRQYQMRSLPGVRPILLGTTGLFGPTPRSGSST
PTGLKQGRQGLWFANPGGSNSMPSRTHSSVQRTRSLPVHTNPHTMAMFQQTDLQVPVTEP
DINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgggagtcctcgccggctggtttaagggatggaatgagtgc
gaacagacggtggcgttactgtcgctgctcaagcgggtcagtcgaacccaggcacgcttc
cttcagctctgtctggagcattccttggctgaatgcaccgagctgcatgttctggaaagg
gaggccaataatccagtggtgatcagtcagtggcagagtgagccaaaagaacgggtcatc
tctctggttctgacccacctgcctctcctcaaacccggcaacgtcgaggccaaggtggag
tacatgagtctcctgccgaagatcttgggccacaccatcgaacatggccggcacttagag
gaaagcaggcagcttctgtcctacgccctcatccaccctgcaacctccctcgaggaccgg
gggaacctcgccctctggctcaaccacctggaggagcgggcggccgcccgaggagccggg
gactcccttgagcgtgtgccttcatctcaccacggacagcctccgcacctctacccccac
caccagcgctatgggtcggacgaccgtctcaacggctggcagagctcgagggactctggg
ctaggaagttggcagcagcagcaacagggctgcgaaaacgggcacctctcactgtaccca
tcatcctccgtgccctccactatcaacgctgtaggtacaggcagtgggaccaacacaatc
acggcgcatgtctcttttctggcagttctgtcgggtggacagcacagtcctctgcggcgt
tcggtgtctctgacccctccgatgagcggcggatctaaccagcctctggggcacggatgg
ctctcccaggaggacctgcgtccccgtgggccggcccccgaccacgcccccatctctcct
cagagcagcgtggcgtcctcgggcagcggcggcagcgagcacctggaggagcacgccgct
gtccgaagtacattccatgaggagggcagcgggatgagggatgtgccggcatggctgaag
agtctccgtctacacaagtacgctggactcttctccaccatgacctatgatgagatgatg
tcgctgacggagcagcagctggaagctcagcaagtcaccaaaggggcacggcacaagatt
atcatcagtattcagaagctgaaagacagacaaaacgtgctgcgctgtttggagaaggac
attttggagggagggaatctacgtgctcctttgcaggagctccaccagatcatccagacg
cccattaaagtctgcagcacagaggagtcttcacagcgccacctgctgagtgcagagggg
aagagcagcatcgccagttcccacctgggcggaggagagacggagggcagctccacggtc
atagccgagggagacatccccgctcagttcactcgcgtcatgggcaaagtttgcacacag
ctcctcgtctctgggtcggatgaggagaacattagttcctacctacagctcattgataag
tgcctaatccatgaggccttcacagagacacagaagaagaggttgttgtcttggaagcag
caggtgcaggtgcagttccggtcaatttcacggaaaactctcctggacctaacaggacag
agaagaagcagtcgttacggtcagtccaactccctcccaaccacgggatgcgtaggcagt
ggcgttcccacccggaggaacctccgccagtatcagatgcggagtttgcctggtgtcaga
cccatccttttgggtaccaccggcctgttcggaccaaccccccgaagcggcagcagcacc
cctaccggcctgaagcagggaagacagggtttgtggtttgccaatccagggggcagtaac
agcatgcccagccgcacccacagctcagttcagaggactcgatcgctacccgtccacacc
aacccacacaccatggccatgttccagcaaacagatttacaggtgcctgtgactgagcct
gacatcaataaccgtttggagtctctgtgtctcagcatgactgaacacgctctgggagat
ggtgttgatcgaacttcaaccatctga
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