Onychostoma macrolepis: 131523236
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Entry
131523236 CDS
T09350
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131523236
Transcription factors [BR:
omc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131523236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
131523236
NCBI-ProteinID:
XP_058605388
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All DBs
Position
17:5051114..5364485
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AA seq
977 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNVQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSVVA
SEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPSLLSPDNTLER
SFFVRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVVAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENSKSDGKGNQSSENSEDPESDSKKQ
TGRPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDHKEGRLGGLHIKVERYGDGEVE
ELQDSPSSCSSEEEEDEVEDIIKDCNSGGELSGPAMSKHQKRKKRRKKQKWDGSRQRLRL
SPSAAATPSPGSLDPTLGDQPPLLLPPSPTSSSVLKIKTEMSEPINFDNDSSIWNYPPNR
EISRNESPYSMTKPHDTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSSGNN
NSAPTSVSSATPGSLVPPSSSTTADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQR
LQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNLLPNAHTAVNFV
DGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGASLTQMPAANVFTTAEGLFSTLPFP
VYSNGIHNTQTLERKED
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggagggatgccggctgcgtccagagtcccgggagctactaacgggaacccg
caaaacgtccagggcttgacgtcttaccaacaaagcgagccatactgggagaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctaaggaaggagaagtcacgtgacgccgctcgctcg
cgccgggggaaggaaaactttgagttctatgagctggcaaagatgcttccactccccggc
gccatcaccagccagctggacaaggcctccatcatccgcctcaccattagctaccttaag
atgagggacttcgccaaccagggagacccgccgtggaacctgcgcatcgaaggaccgccg
cccaacacctcagtcaaagctatcgggtcccagcggaggcggagccccagcgttgttgcc
tcggagatctttgagcctcaccttggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacggtgtccatatacctg
gggctttcacaggtagagctgacgggcagcagtgtgtttgattacgttcacccgggtgat
cacgtggagatggccgagcagctgggcatgaagcttccgccgggcagagggctgctgtct
cagggcggcggggccgaggacggggccagctctgcctcttcttcctctcactctgagaca
cctgagccagtggagtcgaacagccctagtcttctgtcgccggataacactctagaacgt
tccttcttcgtccgtatgaaatccacgctcaccaagagaggcgtccacatcaagtcctct
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacacacagt
cgttcggtacccaatcaaatcatgggcatggttgtggtggcacacgcacttcctccacca
accatcaatgaggttcggatcgactgccagatgtttgttacacgggtcaacatggacctc
aacatcgtctactgtgaaaacagaatcagcgactacatggacctgacacctgtcgacatc
gtagggaagagatgttatcacttcattcacgcagaggacgtggaaggcattcggcaaagc
catttagacctgatgaataaaggtcagtgtgtgacaaagtattaccgctggattcagaaa
aatggaggttatatctggatccagtccagtgccactattgcaatcaacgccaagaacgcc
aacgagaaaaacatcatttgggtcaactatgtactcagtaatccggagtacaaagacaca
cccatggatatcgcacagctgcctaacctgccagagaaagcatcagagtcctcagaaaca
tccgattctgaatccgactccaaggagaactctgaagacaacgaaaactccaagtcagat
gggaagggcaatcagtcttccgagaacagtgaagatccagagtcagacagtaagaaacag
acgggccggccaccagagcaagagatgagacgacaggaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtctggaaccttctgactgtgaaacagaccacaag
gagggccgcctgggtggcttacacataaaggtggagcgctacggtgatggtgaagtggag
gaactgcaggactcgccctcctcttgctcctcagaagaagaagaggatgaggtggaagat
attataaaggactgcaacagtggaggagagctgagcgggccagcaatgagtaaacaccag
aagagaaagaagaggagaaaaaagcagaaatgggatggtagtcggcaacgtctccgtctg
tctccctcagccgctgctacccccagccctggcagcctggaccccactcttggagaccag
cctcccctcctgcttccaccctccccaaccagttcctctgtgctgaagatcaagactgag
atgtcagaacctataaacttcgacaacgacagcagcatctggaactacccacccaaccga
gagatctcccgcaacgagtccccctacagtatgacaaaaccccacgacaccttcccttct
cccccgcctgccggcctgcaggtgtccatcccggactccgtcctcactccacctggtgcc
gagggtggaggaggcagcagaaagcccaacttcaatggcaacagtagcagcggcaacaat
aacagtgcccccacctctgtgtccagcgcaactccgggcagcttggttcctccttccagt
tccaccaccgctgacccgctctccccacctctctcagcctcgccacgggacaagcagcag
ggtacacccacctcctccggttccctgctctacaccagtgacctggaagccctgcagagg
ttacaagcagggaacgtggtacttccattggtgcatagagtcacaggcacgcttgctgcc
acgagcacggcttccccgcgagtctacaccactggaacgatccgatatgccccggcagat
gtcagcctggccatgcagggcaacctcctgcctaatgcccacaccgctgtgaactttgtg
gatgggcccggctttggcatagaccccaagacgcccatggagatgctgtaccatcacgtg
caccggctcaacatgtccaccccctttgggggtgcggtcagcggagccagcctcacgcag
atgccagctgctaatgtcttcaccacagcagagggacttttctccacgcttccgtttccc
gtctacagcaatggcatccacaacacacagactctggagcgcaaggaggattga
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