Onychostoma macrolepis: 131523783
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Entry
131523783 CDS
T09350
Symbol
hmbox1a
Name
(RefSeq) homeobox-containing protein 1a isoform X1
KO
K24885
homeobox-containing protein 1
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131523783 (hmbox1a)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
131523783 (hmbox1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
CUT
HTH_31
HTH_24
HTH_26
NOC3p
Motif
Other DBs
NCBI-GeneID:
131523783
NCBI-ProteinID:
XP_058606420
LinkDB
All DBs
Position
17:complement(8397033..8410484)
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AA seq
447 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRSGMTKQEILHALDTLERLDREHVEKFGHRHAHGGNGA
AGVNHGNGSNATTSSNSCTTSSNNLTASSSTTSTATQTGYRGNGLSPSPSNSYDTSPPPT
VPTPVPVVAPLVQNGRDGLAAMPNGKLSPPRFTVSNTSSRAFAYEHPDEEVDIDDKVEEL
MRMDSAIIKEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWY
QLEKTTPGATLAMRPTPMALEDIVEWRQTPPPISSTQGSFRLRRGSRFTWRKECLAVMES
YFNDNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIE
AAILESHGIDVQSPGGHSNSDEIDGNDYGEPVAADQVLGMDDNTGPNEHQDPIALAVEMA
AVNHSILALARQGGPTSDIKTEVLDDE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattatacagatgagcctcgttttaccattgagcagatcgacttgctgcagcgg
ctacgtcggagcggcatgacaaagcaagagatcttgcacgctctggacaccctcgaacgg
ctggaccgcgagcatgtggagaagtttggccaccggcacgcccacggcggaaacggggca
gccggcgtcaatcacggcaatggcagcaacgccaccacctcttccaactcctgcactacc
tcctctaacaacctcacagcctcttcttcgacgacctctacggccacgcagactggatac
cgtggcaatggcctctctccctcccctagcaacagctatgacacctccccgcccccgacg
gtcccgacccctgtgccggtagtagcacctttggtccaaaatggacgggacggcctcgcc
gctatgcccaacgggaagctctctccaccccgcttcactgttagcaacacctcctcgcgg
gcctttgcgtacgagcacccagatgaggaagtggacatcgatgacaaagtcgaggagctc
atgagaatggacagtgctataattaaagaagagattaaagcgttcttggggaaccggcga
atatcgcaggcagtagttgcccaagttacaggtatcagtcagagccggatctctcattgg
ctgctccagcagggctcagacctcagtgagcagaagaaaagagccttctaccgctggtac
caactagagaaaactacacctggtgcaacactagcgatgcggcccaccccgatggccctg
gaggacattgtggagtggcgtcagacccctcctcccattagcagcacccagggcagcttc
cgtctgcggcgaggcagccgcttcacctggaggaaagagtgtctggcggtgatggagagt
tatttcaatgacaaccagtaccccgatgaagccaaacgagaggaaattgccaacgcctgc
aatgcagttattcagaaaccagggaagaagctttcagatcttgagagggtcacgtctctg
aaagtttacaactggtttgccaacagacggaaggaaattaagagaagagccaacatagaa
gcagcaatcctggagagtcatgggattgatgtccaaagcccgggaggtcattccaacagc
gatgagatcgatggaaatgactacggtgagccagtagctgctgaccaagttttgggaatg
gatgacaacaccggcccaaacgaacaccaggaccccatagctttggcagtggagatggcc
gctgtcaatcacagcatcctggcactggcgaggcagggcggacccaccagtgacatcaag
acagaggtgctggacgatgagtga
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