Onychostoma macrolepis: 131524133
Help
Entry
131524133 CDS
T09350
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131524133 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131524133 (sf3b3)
03041 Spliceosome [BR:
omc03041
]
131524133 (sf3b3)
03036 Chromosome and associated proteins [BR:
omc03036
]
131524133 (sf3b3)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131524133 (sf3b3)
Spliceosome [BR:
omc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
131524133 (sf3b3)
Complex B
131524133 (sf3b3)
Complex C
U2 SnRNP specific factors
131524133 (sf3b3)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
131524133 (sf3b3)
TFTC complex
131524133 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
131524133
NCBI-ProteinID:
XP_058606895
LinkDB
All DBs
Position
18:complement(11355217..11384814)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
VIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVATEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQDAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIFNQVAFP
MQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAVCRFSNGG
DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGSGDKLEFLHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMAAADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgaccctgcagcgggcaactggcatctcccatgccatccatggc
aacttctcaggaactaagcagcaggagattgttgtttcccgtgggaaaattctggaactg
ctgcgtcctgatgccaacacggggaaggtccacacgctgcttactatggaggtgtttggt
gttatccgatccctcatggctttcaggttgacaggtggaactaaagactatgttgtggtc
ggaagtgactctggccgaattgtgatcttggagtaccatccttccaagaacatgtttgaa
aagatacaccaggagacgttcggcaagagcggctgcagacgtatcgtgccggggcagttc
ctcgctgtggacccaaagggcagagctgttatgataggtgccatagagaagcagaagttg
gtttacatcctgaacagagatgcagctgcccgccttaccatctcctcccctctagaggcc
cacaaggctaatacgcttgtttaccatgtggttggtgtggatgtggggtttgagaacccc
atgttcgcctgcctggagatggactatgaggaggcagataacgatcccaccggagaggct
gctgcaaacacacagcagactctgaccttctatgagttggacttgggcctcaaccatgtg
gtgcgcaagtacagtgaggcactggaggaacacggcaacttcctcatcacagttcctggt
ggttcggatggtcccagcggtgtgctcatttgctctgagaattatatcacctacaaaaac
tttggggaccaaccagacatccgttgcccaatcccacgcagaaggaatgacctggatgat
cctgagcgaggcatgatctttgtctgctctgccacccacaagaccaaatccatgtttttc
tttctagcccagacagaacagggagacatctttaaggttactttggaaactgatgaggag
atggttactgagatcaggatgaagtattttgataccatcccagtggctacagccatgtgt
gttttgaagactggcttcttatttgttgctacagagtttggaaaccactacctgtatcag
attgcccacttgggtgatgacgacgatgaaccagagttttcctctgccatgcctttggag
gagggagacacattctttttccaacctcgcccccttaagaaccttgtgctggtcgacgag
caagaaaatctttctcccatcatgtcctgccagattgctgatttggctaatgaagacacc
ccgcagctatatgtggcgtgtggcagaggacccagatctacactgagagttttgagacac
ggactggaggtttcagaaatggctgtctctgaactgcccggtaaccccaatgctgtgtgg
actgtcaggagacatgtagaagatgagtttgatgcctacatcattgtgtccttcgttaac
gctaccctggtgctttctatcggtgagactgtggaagaagtgacagactctggtttcttg
ggcacaacacccaccctgtcatgctcattgcttggggaagatgcacttgtgcaagtctac
ccagatgggatccgtcatatccgtgcagataagagagtgaacgaatggaagactccaggg
aagaagacaatcgtccgatgtgctgtcaatcagaggcaggtggtcatcgctttgactgga
ggagaactggtctactttgagatggacccgtctgggcagctgaatgaatacactgagagg
aaggagatgtcggcagatgtggtgtgcatgagtttggcaaatgtgcctcctggtgaacag
cgttcccgtttcttggctgttgggttggtggacaatacagtccgcatcatctccctggat
ccatctgactgtctacagccgttaagtatgcaggctcttcccgcccagccagagtctctt
tgtattgtggagatgggtggagtggaaaaacaggatgagctgggagaaaagggcaccatt
ggctttctatacctcaacatcggcctgcagaacggagtgttactgcgtactgttttggat
ccagtgaccggggacctgtctgatacgcgaactcggtatcttggttctcgtcctgtcaag
cttttcagagtccggatgcaggcccaagacgctgttctggccatgtctagtcgttcttgg
ctgagttactcataccagtctcgtttccacctgaccccactgtcatatgaaaccttagag
tatgcttcagggttcgcttctgaacagtgtcctgagggtattgttgccatttccaccaac
acactgaggattttggctcttgagaaactgggcgccatcttcaaccaggtggcattccca
atgcagtatacacctcgcaagtttgtcatccacccagagacaaataacctgatactgatc
gaaacggaccacaatgcctacactgaagccaccaaagcccagcgcaagcagcagatggct
gaggaaatggtggaggcagcgggggaggatgaaagggagctggctgcagaaatggcagca
gctttcttgaacgagaacctgccagaagccatctttggggcacctaaagcaggctctggg
cagtgggcctcactagtgcgcatgatcaaccccatccaaggaaacacactggacctggtg
cagctggagcagaacgaggctgctttcagtgtggctgtatgtcgattttccaatggaggt
gatgattggtatgtgttggtgggtgttgccagagacatgatactaaatcctcgctccgtt
ggtgggggttatatttatacctatcggctagttggaagtggggacaagctggagttttta
cacaagacgcccgtggaggacgtgcccctggctattgcaccctttcaaggacgtgtgttg
gttggagtgggcaaactcttgcgcatctatgacttgggaaagaagaaacttcttcgcaag
tgtgaaaacaagcatgttcctaacttggtaacgggcatccacacaattgggcagcgcgtg
atagtatccgatgttcaggaaagtctattctgggtacgctacagacgcaacgagaaccag
ctcatcatctttgccgacgatacatatcctcgttgggtcactaccgcctgcctgcttgat
tatgacaccatggctgctgcggataagtttggaaatatctgcgttgtccgcctgcctccc
aataccagcgatgatgttgatgaagaccccacagggaacaaagcattgtgggacagaggc
ttgcttaacggagcatcacaaaaggccgaggtgattattaactatcacataggagagacg
gttctgtccctccagaaaactaccctcatccctggaggatcagagtccctggtgtacacc
acgctatcgggaggcattggcatcctggtgccgttcacttctcatgaggatcatgacttc
ttccagcacttagagatgcacatgcgctctgagtttccccctctgtgtggtcgtgatcac
ctcagcttccgctcgtactattttccagtaaagaatgtgatcgatggagacctttgtgag
cagtttaactccatggacccacataagcagaagagtgtctctgaggaattggaccgcacg
cctccagaggtgtcgaagaaattggaagacatccgaacacgctatgccttctag
DBGET
integrated database retrieval system