Onychostoma macrolepis: 131524199
Help
Entry
131524199 CDS
T09350
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
omc
Onychostoma macrolepis
Pathway
omc03420
Nucleotide excision repair
omc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131524199 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
131524199 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131524199 (ddb1)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131524199 (ddb1)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
131524199 (ddb1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
131524199 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
131524199 (ddb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
131524199
NCBI-ProteinID:
XP_058607056
LinkDB
All DBs
Position
18:34025100..34054554
Genome browser
AA seq
1155 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVQFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESGRD
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVAHQQLIQITSASVRLVT
QDSKALVSEWKEPQGRNISVASCNSTQVVLAVGRVLYYLQILTGELKQISSTEMEHEVAC
LDITPLGESAGESSICAVGLWTDISARLLKLPCFSPLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PKRICYQEVSQCFGVLSSRVEMQDTSGTTAAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSWSWSLETVNTAHCLSAATTDEERQHLQEVGLFHLGEFVN
VFSHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSV
GKIEHNFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREAT
VDEVIKIVEELTRIH
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaactacgtggtcacggcgcagaagcccacggcggtgaacgcctgcgtcacg
ggtcacttcacatctgcggaggatctgaacctgctgatcgccaagaacactcgtctggag
atctatgtggtcactgctgagggtctgcggccggtcaaggaggtcggcatgtacggcaag
atcgcggtcatggagctcttcagacccaagggtgagagcaaagatcttctgttcattttg
actgctaaatacaacgcctgtatcctggagtacaagcagaacggagacagcatcgacatc
atcacccgcgctcacggaaacgtgcaggatcggatcggccgtccgtctgagaccgggatc
atcgggatcgtggacccggagtgtcgtatgatcggcttgcgtctgtacgacgggctgttc
aaggtcatcccgctggaccgcgataaccgcgagctcaaagccttcaacatccgtctggag
gagctgcaggtcatcgatgtccagttcctgtacggctgccaggcgcccaccgtctgcttc
atatatcaggatcctcagggtcggcatgtcaagacatatgaggtttctctcagggagaag
gagttcaacaaaggaccctggaagcaggagaacgtggaagctgaagcatcgatggtcatt
ccagtcccagagccgtttggaggagctataatcattggacaggaatccatcacttatcac
aatggagacaaatacttagccatcgctcctccgacgatcaagcaaagcaccattgtgtgt
cataaccgcgtggatccgaacggctcgcggtacctgctgggagacatggagggccgactc
ttcatgctgctgctggagaaagaggagctgatggatggcgccgtggtgctcaaagacctg
catgtggagctgctgggagagacctcaatcgccgagtgtctgacgtatctggataacggt
gtggtgtttgtgggatccagactaggagattctcaactagttaagctgaatgtggacagt
aatgaccagggttcgtatgtggctgtaatggagaccttcactaacctggggcccatagtg
gacatgtgtgtggtggacctggagagacaaggacagggtcagctggtgacgtgctccgga
gcgtttaaggaaggctctctcaggatcattcggaacggcataggcatccatgagcacgcc
agcatcgacctgcccggcatcaaaggtctgtggcctctccgctccgagtcgggcagagac
actgatgacatgctggttctgtcttttgtcggtcagaccagggtgctgatgctgagcgga
gaggaggtggaggagacggagctgccggggtttgtggataatcagcagacgttcttctgt
gggaatgtagcgcatcagcagctcatacagatcacgtcggcgtctgtgaggctggtcact
caggacagcaaggctctggtgagcgagtggaaggagccgcagggcaggaacatcagcgtg
gcgtcctgcaacagcactcaggtggttctggctgtgggtcgagtgctgtactacctgcag
atactcacaggagaactcaaacagatcagctctacagagatggagcatgaggtggcgtgt
ctggacatcactcctctgggcgagagcgcaggagagtccagcatctgtgctgtggggctc
tggaccgacatctcagcccgcctgctcaagttaccctgcttcagcccgctgcacaaagag
atgctgggtggagagatcatccctcgctccatcctcatgaccacgtttgagggcagtcat
tacctgctgtgtgcgctgggagacggggcacttttctatttcggactggacattcagaca
ggggttttgagtgagcgtaagaaggtgactctgggcactcagcccacggttctgcgcacc
ttccgctcgctctccacctcaaacgtgttcgcctgctccgaccggcccaccgtcatctac
tccagcaaccacaaactggtcttctctaacgtcaacctgaaggaggtcaactacatgtgc
ccgctcaactccgagggataccccgacagtctggctctggccaacaacagcactctgacc
atcggcacgatcgacgagatccagaagctccacatccgaaccgttcctctctacgagtcg
cccaagcggatctgctatcaggaggtgtctcagtgcttcggagttttgtccagtagagta
gaaatgcaggacaccagcgggaccacagcagccgtgcggcccagcgccagcacacaggct
ctctccagcagcgtcagctccagtaagctgtttcccagcagcacttctcctcacgagacg
tcgttcggggaggaggtggaggtgcacagtctgctggtggtggatcagcacacgtttgag
gtgctgcatgcgcatcagttcctgcagaacgagtatgctctcagtatggtgtcctgtaag
ctgggcagagatcctgccgtgtacttcatcgtcggcaccgccatggtgtatccagaggag
gcggagcctaaacagggccgcatcatcgtctttcactatacagacggcaaactgcagacg
gtggcagagaaggaggttaaaggtgcggtttactccatggtggagtttaatggcaaactg
ctggcgagcatcaacagcaccgtgcgtctgtacgagtggacggcggagaaggagctgagg
acggagtgtaatcactataataacatcatggccctgtatctgaagactaaaggcgacttc
atcctggtgggcgacctgatgcgctccgtgctgctgctggcctacaaacccatggagggc
agcttcgaggagattgctcgtgatttcaatcctaactggatgagtgctgttgaaatcctg
gatgatgacaacttcctcggagcggagaacgctttcaatctgttcgtctgccagaaggac
agttggagctggagcctggagacagtaaatacagcgcattgcttgagcgcggcgactaca
gacgaggagcggcagcacctgcaggaggtgggtctgttccatctgggcgagtttgtcaat
gtgttttcacacggatctctggtgctgcagaatctgggcgagagctcgactccgacgcaa
ggctcggtgctgtttggcaccgtcaacggcatgatcggtttggtgacgtcgctgtcggag
ggctggtacagtctactgctggatctacagaacagactcaacaaagtcatcaagagcgtc
ggcaagatcgagcacaacttctggaggtcgttccacacggagcgtaagactgagcaggcc
accgggttcatcgatggagatctgatcgagagcttcctggatctgggtcgtgcgaagatg
caggaggtggtcagcacactgcagattgatgacggcagcgggatgaagcgcgaggcgacg
gtggacgaggttattaaaatcgtggaggagctgacgcggatccactaa
DBGET
integrated database retrieval system
