Onychostoma macrolepis: 131524216
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Entry
131524216 CDS
T09350
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc02010
ABC transporters
omc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131524216 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131524216 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omc02000
]
131524216 (cftr)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
131524216 (cftr)
Transporters [BR:
omc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
131524216 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
RsgA_GTPase
AAA_16
MMR_HSR1
DUF87
FtsK_SpoIIIE
AAA_23
Dynamin_N
T2SSE
DUF5805
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
131524216
NCBI-ProteinID:
XP_058607085
LinkDB
All DBs
Position
18:12387999..12419094
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPVEDASCLSKYFFWWTNPIMRKGFKEKLRPSDVYQAPSQDAADILAERLEKEWDRE
VASGRKKPSLLRALARCFIRPFLLFGFLLYIGEATKTVQPQLLGRIIASFDPVHEPERAN
GYFLAFGLGLLFTARFLLLQPAMFGLHRLGMQIRIALFSIIYKKTLKLSSRVLDKISTGQ
LVSLMSANLGKFDQSLGMAHFVWISPLQCILCTGLIWELIDVNSFCALAAISLLGVLQAF
LSHKMGPYKAQKVLLTNKRLALTSEIMENLHSVKAYGWEEIMETLIKNIRQDEVKLTRKI
GSLRYFYSSAYFFSAIFVIVAAIVPHALSRGINLRRIFTTLSYCMVLRMTVTRQLPGSIQ
MWYDTMRLIWKIEEFLSKEEYKLMEYDLSITELELKDVTASWDEGPGELLERIKQENKAN
GHHNGDAGLFFTNLYVTPVLKDISLNLKKGEMLAVTGSMGSGKSSLLMTILGELVPSSGK
IRHSGRISYSSQTAWIMPGTIRDNILFGLTYDEYRYKSVVKACQLEEDLAALPEKDKTPM
AEGGLNLSGGQKARVALARAIYRDADVYLLDAPFTHLDIATEKEIFDKCLCKLMASKTRI
LVTNKIEHLKRADKILLLHNGESFFYGTFSELQSERPDFSSLLLGLEAYDNVSAERRCSI
LTETLHRVSVDESAGMRPERSAFRQVAPSMPVYIDERKSSVIVNTLGAARKASFIQIPEE
EVRRTLPDRKFSLVPENELVDESFMGSDVYHNHGVHMAGQRRQSVLAFMTNAQGQGRRDH
LQSSFRRRLSVVPQSELASELDIYTRRLSDSTYDVTGVLEEENIEACLVDEIDEKEEVFE
TTKWNTYVRYVSNNKSLLYVLIFIFLIAAIEVAGSVAGIFLITDELWKEEHQRVEPNMTK
YSNMSSPGKNYAIIVTQTSSYYILYIYVATSESLLALGFFRGLPFVHTMITISKKLHQKM
LHAVLSAPMSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDFVQLTVVVVGCILVVSITR
PYIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIISLKGLWTIRAFERQA
YFENLFHKTLNTHTATWFLYLSTLRWFLFRSDIIFVFFFTLTAWIAVGTNQDKPGEIGII
ICLAMLILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSETPKTDKSKYSDLIIENVDAQ
ADSCWPNRGQIDVQNLTVKYTEGGHAVLKNLSFTVEGRQRVGILGRTGSGKSSLFNALLK
LVYTDGEISIDGVNWNKMPLQKWRKAFGVVPQKVFIFTGPFRMNLDPYGCHSDEELWRVT
EEVGLKTVIEQFPDKLDFQLEYGGYVLSNGHKQLICLARSILSGARILLLDEPSAHLDPV
TIKVLKKTLRQSFSTCTILLSEHKVEPLLECQSFLMMDKGQVKTYDSIQKLLNETSHLKQ
AISPAERLKLFPRRNSSMRTPQSKLSSVTQTLQEEAEDNIQDTRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcacctgtggaggatgccagctgcctctcaaaatacttcttctggtggaca
aaccctataatgagaaagggttttaaggagaaactgaggccatctgatgtttatcaagct
cctagtcaagatgcagcagacatccttgcagagcgtttggagaaagaatgggacagagaa
gttgcatctggaaggaaaaagcccagtctactacgagcactggcacgatgcttcatacgt
ccttttctgttgtttggcttcctcctatatataggcgaggctacaaaaacagtgcagccg
cagcttttaggacggataattgcgtcatttgacccagtccatgaaccagagcgagccaat
ggttactttcttgcctttggtcttggcttgctattcactgcacgctttctcctgctccag
cctgccatgtttgggctgcaccgcctgggcatgcagatcaggatcgcactgtttagcata
atctataaaaagaccttgaaactttctagccgagttttggacaagatcagcacaggtcaa
ctggtcagtctgatgtcagccaacctgggcaagtttgatcagagtctgggtatggcccat
tttgtatggatatcaccattgcaatgcatcctgtgtacagggcttatctgggaactcatt
gatgtcaatagcttctgtgcacttgctgctatctctttgctgggggtcttgcaggccttt
ctctcacataaaatgggtccttacaaagcacaaaaggtgctactgactaacaaacggttg
gctctgacctcagagatcatggagaacctgcattcggtgaaggcctatggctgggaggag
ataatggagaccctcatcaagaacatcagacaggatgaggtgaagttgaccaggaagatt
ggctccttgcgctacttctacagctctgcatactttttctcagccatctttgtgattgtg
gccgcaatcgtgcctcatgccctcagccgtggtatcaacctccgtcgcatattcaccact
ctctcctactgtatggtgctgcgcatgactgtcactcgacaactgcccggctccatccag
atgtggtacgacaccatgcggcttatttggaagattgaagaatttcttagcaaggaggaa
tacaagttaatggaatacgatctcagcatcacagagctggaacttaaagatgtgactgct
tcttgggatgagggtcctggtgaacttttggaaaggataaaacaggagaacaaagctaat
ggccatcacaatggagatgcaggcctcttctttaccaacctctatgtgactcccgtactg
aaggacatcagcttgaacttgaagaaaggagagatgttggctgttactggttctatggga
tctgggaagagctcattgttgatgaccatcctcggggagctggttccctcctctgggaag
atccgacacagcggccgaatctcctactcctcccaaacagcctggatcatgcctggcacc
atccgagacaacatcctttttggtctgacctatgatgagtatcgctacaagagtgtggtc
aaagcatgccagcttgaggaggatttggctgctcttcctgagaaggataagacacctatg
gcagaagggggtttaaacttgagtgggggtcagaaggcacgtgtggctctagccagggct
atttacagagatgctgatgtttacctgcttgacgcaccatttactcacctggatattgca
acagaaaaagaaatatttgacaaatgtctgtgcaagctgatggcctctaagacacgcatc
ttggtaacaaataagattgagcatttaaagcgggctgataagatcctactgctccacaac
ggtgaaagttttttctacggcaccttttcagagcttcagtcagaacggcctgatttcagc
tctttgcttttgggtttggaggcctatgacaatgtcagtgcagagcgccgctgctccatc
ctcacagagactctccaccgtgtctcggtggatgagagcgcaggcatgcgacctgaacgc
tcagcttttcgccaggtggccccatccatgcccgtgtacatagatgaaagaaaatcttca
gttatcgtcaacactctcggagcagctcgtaaggcgtccttcattcagatacctgaagaa
gaggttcggaggacattacctgaccggaagttctccctggtaccagagaacgagctagtg
gacgagtcttttatgggaagcgatgtgtatcataaccacggagtgcatatggctggtcag
aggaggcagtcggtgttagctttcatgaccaatgcacaaggccagggccgtcgtgaccac
cttcagtcatctttccgcagacggctgtctgtcgtgcctcagagcgaactggcatctgag
ctggacatctatactcgccgcctgtcagacagcacatatgacgtcaccggggtcctagag
gaagagaacattgaggcatgcttagttgatgaaatagatgaaaaagaggaggtatttgaa
acaacaaagtggaacacatacgtcagatatgtgtcaaataataaaagccttctgtatgtt
ctgatcttcatcttccttattgctgcaattgaggttgcaggatctgtagcagggattttt
ctgataactgatgaactttggaaagaagagcaccaacgagttgagccaaatatgacaaag
tactccaacatgtcttcacctggaaaaaactatgccatcattgtgacccaaacaagcagc
tattacattctctacatctacgtggccacgtcagagagcctcctcgcattgggatttttc
cggggtcttccatttgtgcacactatgatcacaatctccaagaaactgcaccagaagatg
ctgcatgctgttctcagtgcacccatgtctgtgctcaacaccatgaagacaggccgaatt
atgaataggttcaccaaagacatggccaccatagatgacatgcttcctctcctcatgttt
gactttgtccagttgactgtggtggtggttggatgtattcttgtggtgtccatcacgcgg
ccgtacatatttctcgcagcaactcccctggccattattttcattgtgatgaggaagtac
tttctccgaacgggtcaacagcttaaacagctggagacagaagctcgtagccccattttc
tcccacctcatcatctcgctgaagggtttgtggaccatcagggcctttgagcggcaggcc
tacttcgagaacctgttccacaagaccctcaacacccacacggccacctggttcctctac
ctgtcaaccctgcgatggttcctcttccgctccgacatcatctttgtgttctttttcacg
ctgaccgcctggattgcggtaggaaccaaccaggataaaccgggtgagattggtatcatc
atatgcctggcaatgctcattctaggcaccttccagtggtgtgttgccaccagcattgca
gtagatggaatgatgcgttctgttgaccgggtttttaagttcatcgacctgccgtctgag
acacccaaaacagacaaaagcaaatactcggatctgattattgagaacgttgatgcacag
gccgactcatgctggcccaaccgcggtcagatcgatgtgcagaatttaacagtcaaatac
actgaagggggtcacgctgtcctcaagaacctctccttcactgtggagggcagacagagg
gtgggtatcttgggccgaacaggttctgggaagagttctctgttcaatgctctcttgaag
ctggtttacacagatggtgaaatctccattgatggggtcaactggaacaaaatgccgctt
cagaagtggaggaaagcctttggtgtggtgcctcagaaagtcttcatatttacgggacca
ttccgcatgaacctagacccttacggttgccatagtgatgaggagctgtggcgggtcacg
gaggaggtcggtctcaagacagtgattgagcagtttccagataaactggacttccagctg
gaatacggaggttatgtactgagtaacggccacaaacagctcatatgtttggctcgctcc
atcctcagcggagcccgcatcctcctcctggatgagcctagtgcccacctcgatccagta
acaataaaggtgttaaagaagacattacgacagtctttctccacatgcactatattactg
tctgaacacaaagtggaaccgctgcttgagtgccagtctttcttgatgatggacaaaggt
caggtgaagacctacgattccattcagaagttgctgaatgagaccagtcacctaaagcag
gccataagcccagcggagcgcctcaaactcttccctcgccggaactccagcatgcgcacg
cctcaatccaaactcagctctgttacacagacactgcaggaggaggcagaggacaatatc
caagacactcgtctctga
DBGET
integrated database retrieval system
