Onychostoma macrolepis: 131524342
Help
Entry
131524342 CDS
T09350
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131524342 (ctcf)
03036 Chromosome and associated proteins [BR:
omc03036
]
131524342 (ctcf)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131524342 (ctcf)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131524342 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
131524342
NCBI-ProteinID:
XP_058607355
LinkDB
All DBs
Position
18:13199716..13207487
Genome browser
AA seq
793 aa
AA seq
DB search
MKYSFLIQVLPMEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGVELLQAAGLEQAQV
EGEPVVEAVNSSVEMMVMDSLDPALLQMKTEVMEAAVGAPGAAHEATVTTVDDTQIITLQ
VVNMEEQQLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATAMPKDGEPVICHTLPLPE
GFQVVKVGANGEVETVEQDELQAQDDQPPQQEEEDMVEAQNEDPAWSKDPDYTPPVKKAK
KTKKSKLRYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKK
TFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKC
TDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLC
SYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDT
VIARKSDLGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYAC
RQERHMVMHKRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCGKTF
TRRNTMARHAENCTGMDSAEGENGAPTKRGRGGRKRKMRSRKDDDDEDSDEHGEPDLDDM
DEDEDEEFLDDDQMDVEQAPPSIPIPAPAEPPVKRKRGRPPKNAPKASPTKSVAKTTTAA
AAIIQVEDESTGAIENIIVKKEPEGADAAAAAQPVVEEVEAVEAGVETVQLTVPEAAPNG
DLTPEMILSMMDR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcatttttgatacaggtattacccatggaagggggaccgactgaggcagtg
gtggaagatgcaggggatgctttcaaggccaaggaatgtaagacataccaaaggcgacga
gaagatgaggaagtgggagttgaattgctgcaggctgctgggttagagcaagcccaggtt
gaaggagagcctgtggtggaggctgtcaacagcagtgtggagatgatggtgatggactcc
ctagaccctgccctgctccagatgaagaccgaagtcatggaagctgctgtcggtgcacct
ggtgctgcccatgaagccacggtcaccactgtcgatgatactcagatcatcaccctccag
gtggtgaacatggaggagcagcagttgggcttgggagagctacagctggtgcaggtgcct
gtttcagctgtgcctgtcactgccgccactgtagaagagctgcaggggacgctggtggac
gccactgccatgcctaaagatggggagccagtcatctgtcacaccctgccattgcctgag
ggcttccaggtggtcaaggtgggtgcaaatggagaagtggaaactgtggagcaagacgag
ctccaggcccaagatgatcagcctccacagcaggaggaggaggatatggttgaagcccaa
aatgaagaccccgcctggtccaaagatccagactacacaccccctgttaaaaaggccaag
aagactaagaaaagcaagctgcgttacaacacagagggtgataaagacatggatgtgtct
gtgtatgactttgaggaggagcagcaggagggactgctctctgaagtcaatgctgagaaa
gttgtgggtaacatgaaaccgcccaagccaaccaaaatcaagaagaaaggtgttaagaag
acattccagtgtgagctgtgcagttacacttgcccgcgccgttccaatctggaccgccac
atgaagagccacacggatgagaggcctcataagtgccatctttgtggacgagccttcagg
actgtgacgttgctgaggaaccacctcaacacccacacagggaccagaccacataagtgc
actgactgtgacatggcctttgtcactagtggagagctggtgcgacaccgacgctacaag
cacactcatgagaaaccattcaagtgctccatgtgtgactatgccagtgtagaggttagc
aagctgaagcgccacattcgctcccacactggagagcgtccgttccagtgcagtctgtgc
agttatgctagcagagatacctataagctgaagagacacatgaggacccactcaggagag
aagccctatgaatgctatatctgtcatgcacgttttacccagagtggtaccatgaagatg
cacatactgcagaagcacacagaaaatgtggcgaaatttcactgcccccactgcgacact
gttattgcccgcaagagtgatcttggtgtgcatctccgtaagcagcattcctacattgag
caaggcagaaagtgccgttactgtgatgcagtgttccatgagcgctatgctctcatccag
catcagaagtcccacaaaaatgagaaacgcttcaagtgtgatcagtgtgactatgcatgc
cgtcaggagcgtcacatggtcatgcacaagcgcacccatactggggagaagccatacgcc
tgcagccaatgtgagaaaactttcagacagaaacagctgctggacatgcactttcggcgc
tatcacgaccccaattttgtacccacatcctttgtatgcaccaagtgtggcaagaccttc
actcgcaggaataccatggccagacatgcagagaactgcactggtatggattctgctgaa
ggagagaatggagctccaaccaaaaggggacgtggaggtcgaaagaggaagatgcgctct
agaaaggatgatgatgatgaagatagcgatgagcatggagaacctgaccttgatgacatg
gatgaagatgaagatgaggagtttcttgatgatgaccagatggatgtggaacaagctcca
cccagcattcccatccctgcgccagccgaacctcccgtcaagaggaaacgcggcagaccc
cccaagaatgcacccaaggcttctcctaccaagtctgtcgccaaaaccaccacagcagct
gctgccattatccaggtggaagatgaaagtacaggggccattgagaacatcatcgtgaag
aaggagcctgagggtgctgatgctgctgcagctgcccagccagtggtggaggaagtggag
gctgtcgaggctggtgtagaaacagtgcagctaacggtccctgaagctgcgcctaatggt
gatcttactcctgaaatgatccttagcatgatggaccggtga
DBGET
integrated database retrieval system
