Onychostoma macrolepis: 131524433
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Entry
131524433 CDS
T09350
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131524433 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131524433 (edc4)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131524433 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
131524433 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_EDC4L
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Pdc1_Ge1
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
131524433
NCBI-ProteinID:
XP_058607542
LinkDB
All DBs
Position
18:complement(12991878..13019477)
Genome browser
AA seq
1413 aa
AA seq
DB search
MASGSNMDMEGATQHLRDILKLDRPGNSAEPSLVESQRKPSFNGELNGILGADLIGAGGL
GTMVEPTAHNSDKLNGQDTQTICLLGDDGSTCVPIRANNVEIVSSRDSSIDSKARGSNQV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERSLLKGFTGAV
TDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSSKIQDEVIVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGFVKFWQIYIEGQDQPSNDEHKRLLSKTQNLTDSKPSKRCL
HEWQPHNGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFT
PDPFNSSVLPSLKASLDLSAEFLILSDVQRKVLYVMELLQDQEKGRASFTAVSEFLLTHP
VLSFGVQDVARARLRHTEVLPPEEESESMTTEGNQGPSESKSGIQIKLYCVHTKSLQDVQ
IWFQPNQGASSSLFMPQSGSQDGFGFSDQLADLNVEAMSSDKESGDSGSQNDLSKILALP
TPADFMSPAPSALPKLMTPDAFMTPSASMPASPGSSASSLTIVTAMSSSDSGARGGDDLA
QSPKMSVECGNSSLTLNASAGSPRSNSILISGLGENIQFSPPSPPLSLDLQAIDPMVVPQ
ASPTRARSPDVISSASTAMSQDIPEIASETLQRGLAGAAADSVPVLHSDSMASAASVLHL
LSPRARSSAEHSLLPLELGVASVDGEQRLNNTPSLLETALSQENAVAAGGSCSDSSVNHT
WPAAPDITRETRNSLRDNGLGDCSREEIKDRHISSPYHRRTYHLTQNDSQDASAEQSDHD
DEVASLASSSGNCGARSSHRLPVKDWKTSPRSSPKLKRKSKKDEGESSQSRQIENQMSTE
VQDELLQMLRSQQREIAELRQNQLDLLQRVTSHMDAVQSSIMAHIEHAMLAQQEQEQRRM
ERILAEGQSRNQQFQDQLVQQLVQTLNNSLCNRLDKVLREEMKKTVPQAISKSLDPVTGQ
MSSTIAAKLTAVEGTLKENVTKVVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQSIVLPV
FERGCQSMFQQINDSFKQGTNEYIQQLETHIKNRKQRDQDARDPVIGQLQQMIDTLQNSQ
DQLATTVTASVCSDVQRQLHMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQA
MRSAAGTPVPSAHLDYQAQQASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQV
FGQQPCPLHQAVLLSLIQQLSTNLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLSQV
RQKILHFLQQDAHSPLSKRARRLMMMLQGLVSH
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggttccaacatggacatggaaggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagccctctttggtagagagccagagaaaacca
tctttcaatggagagttgaatggcattcttggagcggatcttattggagcaggaggactt
gggacaatggtggagccaactgctcacaactcagacaaacttaatggacaggacacacag
actatctgccttttaggagatgatgggtccacctgtgtccccatcagagcaaacaatgtt
gaaattgtgtccagtcgtgactctagtattgacagtaaggctcgtggcagcaaccaggtt
aaaattcagccagtcgccaaatatgactgggagcacaagtactactatggcaatttaata
gccgtgtccaactcctacttggcttatgccatcagaggcgcaaacaatcattctatgatc
cgagtgctgcggctgggatcaaccgagcgttcgctgctgaagggcttcaccggtgcagtc
acagaccttgctttcgcccacttggactccaccctgttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcactagccacagcagcaaaatacaagatgaagtgatcgtt
cacatccgaaggcctgaggacactccactaaactccaaccgcagactcatctggtgtccc
ttcatcccggaggacaatgatgagaacccagaagatgcgtgtcagacactggcactcctt
catgaagacagagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cctgtggacgccacagaactgaaagagggcttcatcaccattagaggacacacagcacgc
attagtgagggagccctgtcccctgatggcacggtcttggccacagccagtcatgatgga
tttgtaaagttttggcaaatctacattgagggacaggaccaacccagcaatgatgagcat
aagagacttctttcaaaaacacaaaatcttaccgactccaaaccatccaaacgatgcctg
catgaatggcagccacataatggacggcctctttcctgcctgctcttttgtgacaaccac
aagaagcaagatccagaagttcctttctggcgcttcctgatcactggagctgatcagaac
caggaacttaagatgtggtgtacagtgtcatggacgtgcttacaaaccatcaggtttacc
ccagatccattcaacagcagtgtactacccagcctgaaggccagtttggacctgtctgca
gaatttctcattctcagtgatgttcagaggaaggtgttgtacgtcatggagctgttacag
gatcaggaaaaaggccgtgccagcttcactgcagtttcagagtttctgcttacacaccct
gtgctcagcttcggcgtacaggatgtcgcccgcgccagactgcgccacacagaggtcctt
ccccctgaagaggaaagtgaaagcatgacaacagaaggaaaccagggaccctctgagtcc
aaatcaggaatccagattaaactctactgtgtgcatacaaaatcactacaggatgtgcag
atctggttccagccaaatcagggggcctcatcctctctcttcatgcctcagtctggatca
caggatggctttggtttttctgaccaactggctgatctgaatgtggaggcaatgagttct
gataaagagtctggtgatagtggatcacagaatgacctgagtaagattctagctcttcca
actccagctgacttcatgagtccagccccatccgccttgcccaaactcatgaccccagat
gccttcatgacgcccagcgcctccatgcccgcttctcctggcagcagtgccagcagcctg
accatagtcacggccatgagcagctcagatagcggtgcaagaggtggagatgatctggcc
cagagccctaaaatgtctgtcgaatgtggcaacagtagcttgactctgaatgccagcgca
ggcagtccaagatccaactctatcctcatctcaggccttggggaaaatatccagttttcc
cctccaagccctcctctttccctggatctccaggccatagaccccatggttgtcccccag
gcctctccaaccagagctcgctctccggatgtcatctcctctgcttcaacagcaatgtcc
caggacatccccgagatcgcctcagagaccctgcagagggggttggccggtgccgctgct
gactcagtccctgtcctgcattctgacagcatggcatcagccgcatcagtcctccacctg
ttgtctcctagagcccggagcagtgctgagcacagtttactgcctctggaattgggtgta
gcatctgtggatggagaacagagactcaataacacaccctccctgctggagacagctctg
tcacaggagaacgcggtagcggctggagggtcctgttctgacagcagtgtgaaccacacc
tggcccgcagcacctgatatcacacgagaaactcgcaacagcctgagagacaatggtttg
ggagactgctctagggaggaaataaaggacagacacatttcttctccataccacaggcgc
acatatcacctgactcagaatgacagtcaagatgcaagtgcagagcagagtgatcatgat
gatgaggttgccagtctggcctcctcctcgggaaattgtggcgctcgctcctctcacaga
cttcctgtgaaagactggaaaacatcccctcgcagctcccctaagctcaagaggaagagc
aagaaggatgaaggagagtcctcacagtctagacagattgagaaccagatgagcacagaa
gtgcaggacgaactcctacagatgttacggagccagcaaagggagatcgcggagctgaga
cagaaccagttggaccttctgcagagagtcaccagccacatggacgctgtccagagctcc
atcatggctcacattgagcacgccatgttggctcagcaggagcaagaacagagaagaatg
gagagaattctggctgaaggacaaagccggaaccaacaattccaggaccagctggttcag
cagctcgtccagactctgaacaacagtctctgcaaccggctagacaaagttttgcgtgaa
gaaatgaagaagaccgtcccacaggcaatatcgaagagtctagatcctgtgactggccag
atgagcagcaccatcgctgcaaagttaaccgcagtggaaggaacactgaaggaaaatgtc
accaaagttgttaaatccaagaacactacggatgctatcggtcgtgctgctgcagaggcc
atgcagggccccatccaggcggcctacaaagagaccttccagagcattgtgctgcctgtg
tttgagagaggctgccagtccatgtttcagcagatcaatgacagcttcaaacagggaacc
aacgagtacatccaacagctggagacacacatcaaaaataggaaacagcgggaccaggat
gcacgggatcccgtgattggccagctgcaacagatgattgacacgctccagaattctcaa
gaccagctggccaccactgtgacggccagcgtgtgctctgacgttcagcgtcagctccac
atgatcgtgggaaatctgcaggactcaatcctgacgcaggtgcaacgcatagtgaaggga
gaggtgagtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcaggcc
atgcgctcggccgcaggaacacctgtaccctctgcacatctggactaccaggcccagcag
gccagcatactgcagttactacagcagggccagctcaatgaggcttttcaacaggcttta
tctgcagcagacttgaatctggtgctctacgtgtgtgagaccattgactcccagcaagtg
ttcggccagcagccctgtccactccatcaggccgtccttctgtctctcatccagcagctc
tccaccaacctgagcacacgcacagaactcaagatcagctatcttgaagatgctgtaatg
aacctggaccatggagatccagtcaccagagaccacatgtctgcagtgctgtcccaggta
cgacaaaagatcttacacttcctgcagcaggatgcccacagccctctgagcaagcgtgca
cggcgcctcatgatgatgctgcagggcctcgtcagtcactag
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integrated database retrieval system
