Onychostoma macrolepis: 131524584
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Entry
131524584 CDS
T09350
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
omc
Onychostoma macrolepis
Pathway
omc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131524584 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131524584 (cstf3)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
131524584 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
131524584
NCBI-ProteinID:
XP_058607785
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Position
18:complement(29675595..29692136)
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AA seq
716 aa
AA seq
DB search
MATETPPDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFMAFKDEYEGKETALLVDRYKFMDLYPCSPSE
LKALGYKDVSRAKYATLLPEAVVTPSAPALKDEADRKPEYPKPDTSQMIPFQPRHLAPPG
LHPVPGGVFPVPPTAVILMKLLPPPSSFTGPFVQVDELMESLRRCVLPETVDAAVELITG
KQLEMSSEGNGPVENHAVGNKSLKRPNADSDEEEDKGSIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaaactccaccggaccaggcggctgagtacatcccagagaaggtgaagaaa
gcagagaagaagttggaagaaaatccatatgacctcgacgcttggagcatactgattcgt
gaagcacagaatcaacccatagacaaagcaaggaagacatatgagcgacttgtcgcccag
tttcccagttcgggcagattctggaagctatacattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttaatgaaggttctgcacattgacctg
tggaagtgttacctctcatatgtgcgggaaaccaaagggaaactgcccagctataaggaa
aagatggcacaggcttatgattttgccttggataagattgggatggagattatgtcctat
cagatttgggtggattacatcaatttcctcaaaggagtagaggctgtggggtcgtatgct
gagaaccagcgcatcacagccgtcagacgtgtttatcagagaggctgcgtcaaccccatg
attaacattgagcagctctggagggactacagcaaatatgaagagggcataaacgtgcac
ttggccaaaaagatgattgaagaccggagcagagactacatgaacgccaggagagtcgcc
aaggagtatgagacggtgatgaagggtttggaccggaacgccccctcagtgccaccccag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggaaaag
agcaacccactgcgtaccgaagatcagaccctcatcaccaagagagtgatgttcgcctat
gagcagtgccttctggtgctcggccaccacccggacatctggtacgaagccgcccagtac
ctggaacagtccagcaaactactggcagaaaaaggggacatgaacaatgccaagctgttc
agtgatgaggcagctaacatctacgagcgtgccataggaactctactcaagaagaacatg
ctgctgtatttctcttttgcagattacgaagagagtcgcatgaagcacgagaaggttcat
agtatttacaaccgcctcctggccatagaagatattgaccctacattggtctatatccag
tacatgaaatttgccagaagagctgaaggcatcaagtctggccgctccatctttaagaag
gccagagaggatcttcgcacgcggcatcatgtgtacgtcactgctgctcttatggagtac
tactgcagcaaggacaaatctgtggcctttaagatatttgagcttggactgaagaaatac
ggtgacattcctgaatacattttggcgtacatcgattacctctctcacttaaacgaggac
aacaacaccagagtcctgtttgagagagtcctgacgtccggcagtctttcccctgagaaa
tctggggaaatctgggcgcgcttcttggcctttgaaagcaacattggagacttggccagt
atcctgaaggtggagcgaaggcgtttcatggccttcaaagacgagtatgaaggaaaggag
acggctctgctggtggacagatacaagttcatggatttgtatccctgctcccccagtgag
ctcaaagccctcggctacaaggacgtgtctcgtgccaaatacgcaacactgctcccagag
gcggtggtcacaccttccgcccctgcgctgaaagacgaggctgaccgcaaacctgagtat
cccaaacctgacaccagccagatgatccctttccagccacgtcatctggcgcctcccggc
ctgcatcctgttcctggaggagtgtttcctgtccctcccactgctgtcatcctcatgaag
ctgctacctcctcccagctctttcactggtccctttgtgcaggttgatgagctgatggag
tctctcagaagatgtgtattaccagagacggtagatgctgctgtagagttgatcactggg
aagcagttagagatgagcagcgaaggaaacggacctgtagaaaaccacgctgtgggaaac
aagtccttgaaacggcctaacgctgattcagacgaggaggaagacaaaggctcgatcgca
cctcccatccacgacatctatcgagcgcgacagcagaagaggatccgatga
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