Onychostoma macrolepis: 131524844
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Entry
131524844 CDS
T09350
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omc04054
]
131524844 (nlrc5)
Pattern recognition receptors [BR:
omc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131524844 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
GBD_Y3
AAA_16
LRR_NXF1-5
nSTAND3
AAA_30
Atypical_Card
Motif
Other DBs
NCBI-GeneID:
131524844
NCBI-ProteinID:
XP_058608188
LinkDB
All DBs
Position
18:10816618..10837652
Genome browser
AA seq
1747 aa
AA seq
DB search
MERVEWSGDILALVAQEASALVELLCEQNRGVLDQIFALVESKTLDQIQSLTNTRDRVSA
VVDYFKTSDRNLCTQFLATVYQYSENIPFLLETTLVSIAGYTPGTNYKCETVDSSLSPHV
KRPRLDHLQSYTDALKSMVLQKHESVAQAVVKDICLEDTWVYLKHRNPPRGKDRTIQPQA
SLDNHEGEESEHKVSVESLLKTTSRVVMLLGQAGSGKTLLVHCLGRDWAEGSFPSIHLLF
LLEFRQLNLISRDLSLKELLFLFYPACDDDEEQSDAVFEFILSNPEKVCFIFDGYDEFRA
KLTHPKKLESINDPNKPLPMTDLLSGLCSRKFLSDCTVLVTCRPRDVTDMFGSPGFITCE
LQGFDRLGVKEYAEQYFHKKGDELKKKAVNLLMNNRHLLSMSHVPGLCHICCVCMEHLFS
SDGTDLRLPTSLTQIYMQILLAFLKRINGGVVSGTSLLQRYRSKIVEMSHLALRGLEEST
IVFMDTDVSPELQDFGVKSGILSHVKLTREDGSSGYGFIFMHLTMQEFLAALHLMTSQNI
TESQLKKRLNLKTRWTTKIDPKSVFTDSLHVYVCGLAAEACKSSLVQLKGTEGTMAWVQK
RQATVRKVLMGFAGSTSQTGPKIVELCRCAHETQDVKLARAIGSRPRFELRNIRLNAVDM
DSLAFVTAAADRNVCLDIGGCSIDLDCLEILPSFKNVDHLIFRSRKYDDKFAEALCGILC
KLQALQKLDFISGGLTDIGAAKLARALKDCPHITHLNISDNSLKDEGITEIAETLCRLPN
IVSVLMGKNSISTDGIFTLVEGMSACTSVQKIHVEANKDISLLFSQSSDKLCENTDLNNT
EEPKNVTLKQCNINVSNVVSLCNKLGGFSYITLVDLSNNSLGNKGLKKILDLLPKLGIIQ
EINVSENGVDMDGVVMLASALCNQKNLRRVDASENGKKKLVLWFDTSRRQLTQNVTGIHL
HKKLSINHSDIKPVYMAKLCKQLVECENLLEIAFSHLKLSNESVEKLMLILPEMSSLQLL
NLSHVDLSTNGALLLIRSLADCQRVTAVELRHQAEAFIKFVPEKAEAAICKLTEYKLCKS
NVEKLSGILENCPRLSELDLSHNLLHDEGVKCFVDYLPKLKISSSVSLTGNQITQVGALH
LVNSMNTCEKVVAVEVSLGVEDQSLIKFVQEHVNGKTLRLRECSFEVRHLKKLVEIVNRC
PRLLTLELSSNSLHSQGLFPLLDSLVELSTIQTVKLRNNGLSSEQIEYFVKNFSSCHQHR
DIRIEEPWLTGNAVASLIARCLNLQPHIKEISVNRASMSVITEGNSSPRSIFVDYPEQFS
PALQSISFDNCDIEGQHLALLTLPIQKCHALQDLRFSQLKVDRKGAEFFSAVIPFLRNLR
NLTLDLKGAAEDEVATLAEVLPKTASFESLSLSQLVLGDHGAAVLGRALQSVPNLKSINL
SQCSGWTAPRGFDLVSGLVQCVSLAEIRLDSLILDEKGITILAQGFSRLTSLRRLSLNKI
RVVTSETFVNGTGILCLLASFKGFRQMEEIELESWRMGDGTYELVKCIPSWTELVKLSLS
DNNVTDQAGEKLLAALSHCRVLQKLQLSKNQLGQASAAKLAQVAPLLTQLSELNLSENQF
GQQGSISLCEGLMSMKALKILHLTSIGSSDLVGVASSLKHCPSIEDVSLSWNSCDDSLAR
TLAEILPLCTKLKRLDLEANNITTAGATVIAKCLPSCPSIEVIRLWRNPISKEDENLKDQ
RLNFSSV
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtggagtggtcaggagacatcctggcactggtggcccaggaggctagtgca
ctggtggaattgctatgcgaacaaaacagaggtgttctggatcagatctttgcattagtg
gaatctaaaacactggatcagatacagtcattgaccaacaccagagaccgtgtctcggcc
gttgtagattacttcaagacttcagaccgaaacttatgtacacagtttctcgccactgta
tatcagtacagtgaaaacattccatttcttcttgaaaccacactggtgtccatagctgga
tacacacctggaacaaactacaaatgtgagactgttgattcttctctttcaccacacgtg
aaacgtccacggctagatcatttacagagctacacggatgctcttaaatccatggtactg
caaaaacatgagtcagtggcacaagctgtagtaaaggacatctgtttggaagacacatgg
gtgtatttaaaacacaggaaccctccacgagggaaagacaggaccatccagcctcaagcc
tctctagacaatcatgaaggagaagagtcagagcataaagtgtctgttgagtctcttttg
aaaaccaccagcagggttgtcatgctgttgggccaggctggatctggtaagacactgctg
gttcactgcctcggtcgagactgggctgaaggctccttcccatccattcacctgctgttc
ctgctggagttccggcagctcaatcttatctcacgtgatttgtccttgaaagaactactc
tttctcttctatcctgcttgtgacgatgatgaggaacaaagtgatgcagtgtttgaattc
atcctctccaaccctgagaaggtctgcttcatatttgacgggtatgatgagtttcgtgcc
aagcttacgcatcctaaaaagctggagagcatcaatgacccaaacaaacctcttccaatg
acagatctcctctcaggactgtgcagtcgtaaattcctttcagattgcaccgtgttggtc
acctgtagaccacgagatgtgactgacatgtttggaagccctggcttcataacctgtgag
cttcaagggtttgaccgattgggtgtgaaggaatacgctgagcaatacttccataaaaaa
ggagatgaactcaaaaagaaagctgtaaacttgttgatgaacaaccgacacctcttgtca
atgtctcacgtacctggactctgtcatatatgctgtgtatgtatggaacatctgttctcc
agtgatggaactgatctgcgactaccaacgtccttaacccaaatctacatgcagatcctc
ttggcgttcctcaaacgcatcaatggtggtgtggtgtctggtacatctctgctgcagaga
tacagatctaaaattgttgagatgagtcacttagccctcagaggactggaggaaagtact
atagtcttcatggacacagatgtgtctccagaactccaggattttggtgttaaaagcggt
atactgtctcatgtgaaactgactcgtgaggatggatcttcaggatatggtttcatcttc
atgcaccttacaatgcaggagtttctcgctgctctccacctcatgaccagccagaacatc
accgagagtcaacttaagaagaggcttaacttgaaaacccgctggaccaccaagatcgat
ccaaaatccgtttttacagactctctccatgtttatgtatgtgggcttgcggcggaggcc
tgcaagtccagtttggtccagcttaaagggactgagggcactatggcttgggtacaaaag
cggcaagctaccgtccgtaaagttttgatgggtttcgcaggaagtaccagtcaaacaggc
cccaaaattgtggagctgtgtcgatgtgctcatgagactcaagatgttaagttggcaaga
gctattggttcgagaccacggtttgaactgcgaaatatcagactcaatgcagttgacatg
gattctttagcatttgtgacagcggctgctgatcggaatgtatgtttggacattggtggc
tgttcaattgatctggattgtttggaaatcctccctagtttcaagaatgttgatcatctc
attttccgtagccgaaaatatgatgacaagtttgcagaggctttgtgtggtatcctgtgt
aaactccaggctttgcagaaactagattttatcagtggtggtctcactgatattggagct
gctaaacttgccagggctttgaaggattgtccacacatcactcacctaaatattagtgat
aactctttgaaagatgaaggtataacagagattgcggaaacactatgcagactgcccaac
attgtctctgtcttgatggggaagaacagcatctccacagatggaatcttcacactcgtt
gagggaatgtctgcctgcacctctgttcagaaaatccatgttgaggccaataaagacatc
agccttttattctcacaaagctctgacaaactctgtgaaaacacagatttgaataacaca
gaagagccaaagaatgtaacgttaaagcagtgtaacatcaatgtatccaatgtagtcagc
ctttgtaataaactcgggggcttttcctacataacccttgtagatttgtccaacaactca
ctgggtaacaaggggctgaagaagattttggaccttctgcctaaactaggaatcattcag
gagatcaatgtcagtgaaaatggtgttgatatggatggagtggtgatgcttgcttctgcc
ctctgtaaccagaagaacctgaggagggtggatgcgagtgaaaatggaaagaaaaagttg
gttctttggtttgacaccagcagacgacagctgacccaaaatgtaaccgggatacatctg
cataaaaaactcagcataaaccatagtgatatcaaacctgtctacatggccaagctgtgt
aaacaactggtagaatgtgaaaacctactggaaattgcgttctcccatctaaaattatca
aatgagtctgttgagaagttgatgttaattcttcctgaaatgtcttctcttcaactactg
aacctaagtcatgttgacctgtctacaaatggggctttgttattgatcagatctcttgct
gactgtcagcgtgtcacagctgtagaactgaggcaccaggcagaagcattcatcaagttt
gttcctgaaaaagcagaggcagcaatttgcaagctcacagagtataaactttgcaaaagc
aatgttgagaagctctcagggatactggagaactgtcctcgcctatctgaattggatttg
tctcataaccttctccatgatgaaggggtgaaatgttttgttgactatttgcccaaacta
aagatctccagctcagtgagcctcaccggcaaccaaataactcaagtcggggcactgcat
ttggtcaactcaatgaacacctgtgagaaagttgttgcagttgaagtcagtcttggagtg
gaagatcagtctctgattaagtttgtgcaggaacatgtcaacggcaaaactcttaggcta
agggaatgcagttttgaggtcagacacttgaagaagcttgtggaaatagtgaacagatgc
cctagactacttacattagaattgtcttctaattcactgcacagtcaaggccttttccct
ctactggacagcctggttgagctgtccacgatccaaactgtgaaattaagaaataatggt
ctgagttctgagcagattgagtattttgttaaaaatttcagtagctgtcaccaacacaga
gacatcaggattgaagagccgtggctgacaggaaatgctgttgccagtctcattgccaga
tgcctaaatttgcagccacacatcaaagaaatcagcgtcaaccgtgcatccatgagcgtc
attacagagggaaattccagtcctagatccatttttgtagattatcctgaacaattctca
cctgctctgcagtccatcagctttgataactgcgacatagaaggacagcatctcgctctt
ctgacacttcccattcagaaatgtcatgccttgcaggatttaagattctctcagctcaaa
gtggaccgaaaaggtgcagaatttttttctgctgtcattccgttcttacggaatctcagg
aaccttactcttgatttgaaaggagcagctgaggatgaggtggcaacacttgctgaagta
ttaccaaaaacggcatcatttgagagtctgagtttgtcccagcttgttttaggtgaccat
ggagctgcagtacttggaagagcacttcaaagtgtgccaaatctaaagtcgatcaatctg
tcccagtgctctggttggacagcacctcgagggtttgacctggttagtggtctggtgcag
tgtgtctcactggcagagatacgacttgactctttgatactcgatgagaagggtataacc
attctagctcaaggcttcagccgtttgacctcacttaggaggctcagcttgaacaaaatc
agagtggtgacatcagagacgtttgtgaatggcactggcatactctgtctactggcttct
tttaaaggttttagacagatggaagagattgagttggaaagttggcgaatgggagatggt
acttatgagcttgtgaaatgcattccttcatggactgaattagtaaaactaagtctgtca
gacaacaatgtgactgaccaggctggagagaagctcttggcagcactatcccactgcaga
gttcttcagaaactacagctgtccaaaaaccagcttggccaggccagtgctgctaaacta
gcacaagtcgctccgttactgactcagctttcagaactcaatttgtcagagaatcagttt
ggccagcaaggatccatatctctttgtgaaggactgatgagcatgaaggcactaaagata
ctacatttgacttcgattgggagttcagatctggttggtgtagcctcatccctcaaacac
tgtccatccatagaggacgtcagcttgtcatggaattcatgtgatgacagcctggcacgg
acactggctgagattctacccctgtgtacgaagctgaaaagacttgacctggaggccaat
aatataaccacagcaggagccacagtgatagccaaatgcctcccatcatgcccctccatt
gaagtaataagactctggaggaacccaatttccaaagaagatgagaatctgaaagatcag
agactgaatttttcatcagtttaa
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integrated database retrieval system
