Onychostoma macrolepis: 131525228
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Entry
131525228 CDS
T09350
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131525228 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131525228 (cnot3b)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131525228 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131525228 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
FlgM
Motif
Other DBs
NCBI-GeneID:
131525228
NCBI-ProteinID:
XP_058608587
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All DBs
Position
19:22703818..22718880
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AA seq
912 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYESDLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEELKRMIERHRYHI
RMLETILRMLDNDSVQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDIDLEDIPQPLVA
TSPSGHTEDEIFQHSSSTPTSTTSSSPIPPSPATCTTSNITDFSNLLTSKLICPIEVYEK
NLEDDKKRGRSTDSEISQSPVKNGNPSSSLSSSSSLSSSSSGASSNSLISMATVASSISS
ASGSSSLLGNMGGPLQNSGSYSSATQQQTQQSQQQHQPKNSVSSLSNANSASSINSTLLP
TSTSTSPPNTSTLGPLTPSSQSQPPLGTGLSSSLGLGKGTSVTSGTNQMPSLVLSGMPAS
LNSMTGFLSGSTLAPYAQAAAAGCVGSGLSASIGTNISSTNSSGVVTSVGTNGSLGSTSL
LGSGTGVLGLGSTQSAVEPLPLVAPNSVGGTLTSGSNVGVIGSNGGTSGTGNAVGSAVLP
RPPSGPKQNGGTSYSAVVADSTSDSALNSASQSQNSQSSSLNSSTNQPMDSGSSLLGSMT
LLPSSPSPSYSESKAGSGSLLNGPHSYTQAADTIKPQEPPSSLKSMAERVAQGSGLEEEL
SALHISSDIFPSSTAPSGTPAAPQSALSEVSIPPSLGVCPLGPVPLSKEQLYQQAMQESA
WTHMPHPSDSERIRQYLMRNPCPTLPFHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGT
KAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFT
FEYRYLEDRDLQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagacagatgtttgaaaaaagttgcagaa
ggggtagagcagtttgaggacatttggaaaaagctccataatgcagccaacgccaaccaa
aaagagaaatatgaatctgacctcaagaaagagattaaaaaactacagcgtcttcgtgac
cagattaagacatgggtcgcctccaatgagatcaaagacaaaagacagctagtagagaat
cgcaaactcattgagacgcaaatggagcggtttaagattgtggaacgggagaccaaaaca
aaagcgtactctaaagaaggactcggcctcgctcagaaagtcgatcctgcacagaaagag
aaagaagaggtcggccagtggctaacgaacacaatagacacgttaaacatgcaagtggac
cagtttgagagcgaggtcgaatcgctttctgtgcagaccaggaagaagaaaggagacaaa
gataagcaggatcggatcgaggaactgaaacgaatgatcgagaggcaccggtatcacatc
cgcatgctggaaaccatccttagaatgctggacaatgactcggtacaggtggattccatc
cgcaagattaaagatgacgtcgagtactaccttgattcctctcaggatcctgactttgag
gagaatgagtttctctatgatgacattgatttagaggacataccccagccactagttgcc
acatctccatcaggtcacacagaggatgagatcttccagcactccagttccacaccgacc
tccacaacgtcgtcatctcccatacctccctctccagctacttgcactacgagcaatata
actgacttttcaaacctacttaccagcaagctaatttgtccaatagaagtttatgaaaag
aatttggaagatgataagaaaagaggtcgttcaacagacagtgaaatcagccagtcacct
gtcaagaatggaaatccatcttcatctctatcctcctcttcctcattgtcatcctcatcc
tcgggagcctcttcaaactctttgatctccatggcgactgtcgccagcagtataagctcg
gcatcagggagcagcagcctcttaggcaacatgggcggccccctccagaactctggcagc
tatagttcagcaacccagcaacaaacacagcaatcccaacagcagcaccagcccaaaaac
tcagtctcctctctctccaacgccaactcggcctcctctatcaacagtaccttactccca
acatccacctccacgtctccgcccaacaccagcacactgggcccgctgacacccagctcg
cagagccaacctccattggggacgggcctttcctccagtctgggccttgggaaggggacg
tctgttactagtggcacaaaccagatgcccagtctggttctttcagggatgccggcatcc
ttgaatagcatgactgggtttttgagcggatccaccctggcgccttatgcacaagcggct
gccgcaggttgcgtgggtagcgggctgtcagcatcgataggaacgaatattagcagtaca
aactccagtggagtcgtaacctcagtggggactaacggaagtctaggctccacaagcctc
ttgggctcagggactggtgttctgggtcttgggtccacacagtctgctgtggagcctcta
cctttggtggctcccaactctgtgggaggcacactgacctcagggagcaacgtgggagtt
atcggaagcaatggaggaacctctgggacaggaaatgcagtgggaagcgccgtgctacca
cggccacctagtgggccgaaacaaaatggcggtacaagttatagtgctgtggtagcagac
agcacgtcagactccgccctcaacagtgccagccaatcacagaatagccaatcctcatcc
ttaaattcctcaacaaatcagcctatggacagtgggtccagccttctggggtcgatgaca
ctgctgcccagctcgccctcaccgtcatacagtgagagtaaagcaggcagtggcagcttg
ctgaacggcccgcactcatacacacaggctgccgacaccatcaagcctcaggagcctccg
agctctttaaagtcgatggcagagagggttgcccagggctcagggttagaagaagagctg
tctgcactacatatctcaagtgatatattccccagctccacggccccttcaggcactcct
gcagctcctcagtctgctctgtcggaggtgagcatccccccatcattgggtgtgtgtcca
ctgggccccgtccccctttccaaagagcaactctaccagcaagccatgcaggagtccgcc
tggacgcacatgcctcacccgtccgactcggagaggatcaggcagtacctgatgaggaac
ccctgcccaacactgccttttcaccaccagatgccacctcctcactccgacactgtggag
ttctaccagagactgtctacagagaccctcttcttcatcttttactacttagagggtaca
aaagcgcagtatctagcagccaaggccttgaaaaaacaatcatggaggttccatacaaag
tacatgatgtggttccagaggcacgaggagcccaaaaccatcactgatgagtttgagcaa
gggacatatatttactttgactatgagaaatggggtcagagaaaaaaggaaggatttaca
tttgagtacaggtaccttgaagaccgggacctccagtga
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