Onychostoma macrolepis: 131525477
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Entry
131525477 CDS
T09350
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
omc
Onychostoma macrolepis
Pathway
omc03320
PPAR signaling pathway
omc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
131525477 (rxrba)
03320 PPAR signaling pathway
131525477 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131525477 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omc03310
]
131525477 (rxrba)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
131525477 (rxrba)
Nuclear receptors [BR:
omc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
131525477 (rxrba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
131525477
NCBI-ProteinID:
XP_058609111
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Position
19:28520662..28540935
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AA seq
481 aa
AA seq
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MMGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVIS
SSLGSPCLPGTPSVGYGPISSPQMNMFPRNREINSTVSMSGLHAVSSSDDVKPPFGLKPL
SAHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVD
KRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVE
KILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLD
DQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAE
VGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLE
AYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQL
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcgacagtagagattcccgtagtccagacagctcatccgtttcctcgcctcca
tcaggtcagcgttcgcccccgttggccccttcagccgccgccatgacttccctgccaccc
atcacttcggctgtgaacagtcccatcagcagcatgggctcacccttctcagtcatcagc
tcctctctgggttctccttgccttcctggaactccttcggtaggctacggccccatcagc
agcccacagatgaacatgtttcccagaaacagagagatcaactccactgtgtccatgtcg
ggtctgcacgctgtcagcagctctgatgacgtcaaaccgcccttcggtttgaagccgctg
tccgcccacagcccagggcccatggtatctcagaaacgcttgtgtgccatctgtggagat
cgctcctctggcaagcactatggcgtgtacagctgcgagggctgcaagggctttttcaag
cgcactgtgaggaaggacctgagctacacatgcagagacaataaggactgtctggtggac
aaacgccagaggaaccgctgccagtactgccgctaccagaagtgcctggccatgggaatg
aagagagaggtggtccaagatgaacgacaacgatccgttcaggaggagcgtcagaggaac
aaggaacgggaaggagaggtggagtccaccagcgcagcgaatgaagagatgcccgtggag
aagattctggaagcagagatggccgtagagcagaagactgagctgcatgcagatggcagc
tcaggggggagctctccgaacgacccagtcacaaatatctgccaggcggctgataaacag
ctgttcactttggtggagtgggcaaaacggatccctcacttcagtgagctgtctctggat
gaccaggtcatcctgctgcgtgctggctggaatgagctactgatcgcgtcattctctcat
cgctccatcacggtgaaggatggcattctgctggccaccggcctccacgtgcacaggaac
agtgctcatagcgctggggtgggagccatctttgacagggagagtgcgcacaatgcagag
gttggggccatattcgacagggtgctgacggagctggtgagcaagatgagggacatgcag
atggataaaacagagttgggctgcctgagagccatcatcctcttcaacccagatgcaaag
ggattgtcaagcccaagtgaagtggagttactgagagagaaagtctatgcatcgctggag
gcctattgcaaacagagatatcctgaccagcagggaaggtttgccaagctcctcctccga
ctgccagcgctgcgctccattggcttaaagtgcctggagcacctgttcttcttcaagctg
attggagacaccccaatcgacaccttcttaatggaaatgcttgaagcaccgcatcagctc
acctaa
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