Onychostoma macrolepis: 131525567
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Entry
131525567 CDS
T09350
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131525567 (vps50)
Membrane trafficking [BR:
omc04131
]
Protein recycling
Others
EARP complex
131525567 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
131525567
NCBI-ProteinID:
XP_058609339
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Position
19:15977810..16109615
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AA seq
990 aa
AA seq
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MQKIKSLMARQGLKSPQESVVDMSPVESFRTPSKEELRELREQPTDPQAEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLHSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYYLTMQWHDEHYKEEEATPGAD
DSSAEGSDESTVGRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDVSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFKFMGQCRSPSVSPSRQPEFTELVELSLFEQYLQGGNPFEMQIDNKEEETEDVL
ASNGYESDELEKSVYQDYDSDSDVPEELKQDFVDEQTGDAPVKSVSRETLRSRKRSDYNL
NRANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
HFQSASLPSQGSQPGASRQAVPIYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGENAG
PHASPEERKEKVPSPHLSQLVVLTASDTLYGLAERVVATESLVFLAEQFEFLQPHLDTMM
PSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNV
YVDVLLKEFETFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctttgatggcccgtcagggtctgaagagtccccaggagagtgtg
gttgacatgagccctgtggagagcttcaggacccccagcaaggaggagctgagggaattg
agagaacaacccactgatccacaggcagaacaggaaatcattgatagcatagaggaagtg
tacttctccagtgactccttcgacatggtgcaatacgagcttgagaaactccctccggat
ttgaaccttctggagcttgaggagtacagagataagctgaagagacaacaagcagccgta
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagctggaa
agagtgacatctctgcagaccaacttgcagctggctgcagtcatctgcactaatgcacga
aggcagcttcattctgctaaagaaggcttcactgaagccagtctggggctgttagccaat
cagagacgacgacagctgttgacaggattgttgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgccatc
cagctgtgtttagaatgccagaaggctgccagcactttcaaacactacaactgtataagc
gagttgaattccaaactgcaagacactctggagcaaatcgaggaacagctagatgtggcg
ctgtccaaaacctgcaagcactttgatgtttctcactacaccaaagttcaactggcatat
aagctgctgggcaagacacagacggccatggatcagctgcacatgcacttcactcaggcc
atccacaacactgtcttccaggtggtgctgggatacgtagagttgtgcgcaggcaatgcc
gacaccaaattccagaagatgcagtacaaggacctttgcacgcacattaccacagacagc
tacatcccctgcttgactgacctctgcaaggccttgtgggaggtgatgctcagttactat
ctaaccatgcagtggcacgatgagcactacaaagaagaagaggcgactcctggtgcggat
gattccagcgcagagggctcagacgaatccaccgtgggccgcagctatgtgaaaaagaag
cttgaacatggcttaacgcggatctggcaggacgtccaattgaaagtgaaagcctatttg
ctgggaacagacgtgtccaacttcaagtacgacgacttcattgtggttctggatgttatc
agcaggctgatgcaggtgggagaggaattctgcggcagcaagtctgaggtgttgcaagag
tccattaagagacagagtgtaaactactttaagaactatcacagaactcgtctggaggag
ttgcgaatgtttcttgaaaatgaaacatgggagttgtgccctgtgaagtccaacttcagt
attgcccagcttcacgagttcaagttcatgggtcagtgtcgttctccttcagtatctccc
agcaggcagccagaattcacagagctggtggagctttctctatttgagcagtacctacag
ggaggaaatccttttgaaatgcagattgacaacaaggaagaggagacagaggatgtcctg
gcttctaatgggtatgagtcagatgagctggagaagagtgtgtatcaggactacgacagt
gacagcgatgtacctgaggagctgaaacaagactttgtagatgaacagacaggagacgct
ccagtgaagagcgtgtccagagagacacttcgcagccggaagaggtccgactacaatctg
aaccgagccaatgcccccatccttaccaacaccaccctcaacgtgattcgtctggttgga
aaatacatgcagatgatgaacattctgaagcccatcgcctttgatgtcatccactgcgtg
tctcagctctttgattattacttgtatgccgtctacaccttctttggccgcaatgacatg
cacttccaatctgcatctctgccttcacaaggctctcaacctggtgcgtccagacaggcg
gtccctatctattggtatgaatcatctgggctgggtttgatcagtagcagactgaggact
acgcttagccgaatccaggagagcctaatagatgtggaggctggaggagagaacgcaggt
cctcacgcatctcctgaggaaaggaaggagaaggtccccagtcctcatctcagtcagctg
gtggtcctgacggctagtgatacactttatggcttggctgagagagtcgtcgccaccgaa
tcactagtttttctggcagagcagtttgagttccttcagcctcatcttgacaccatgatg
ccttcagccaagaagccctttcttcagcagttctactcacagactgtatctacagccagc
gagctccgcaaacccatttactggatagtggcggccaaagccatagattacgaacagatg
ctgttactgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaatgtc
tatgtggatgtccttttaaaggagtttgagacgtttaaccagagactgggagatgtgtcg
aaaatagttcggattcctctgcctgtgtccaatgtcttatgggagcactgcatccgtctg
gccaacaggacattagtggagggctatgcaaatgtgaagaaatgcagtaatgaaggacgt
gcgctgatgcagctggacttccagcagttcctgatgaagctggagaagctcaccgacctc
agaccgattccagacaaggagttcgtagagacctacatcaaggcatactaccttactgag
aatgacatggagcagttcatcaagaaccacagggagtactctatgaagcagctgactaac
ctggtcaacgtctgccttgggtcccacatcaacaagaaagcacgacagaaactcctcgca
gctattgatgacattgaccggccgaaaagataa
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