Onychostoma macrolepis: 131525654
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Entry
131525654 CDS
T09350
Symbol
col14a1b
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omc00535
]
131525654 (col14a1b)
Proteoglycans [BR:
omc00535
]
Extracellular matrix (ECM) proteoglycans
Others
131525654 (col14a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4959
NDNF
Big_5
Motif
Other DBs
NCBI-GeneID:
131525654
NCBI-ProteinID:
XP_058609510
LinkDB
All DBs
Position
19:complement(32990105..33050895)
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AA seq
1844 aa
AA seq
DB search
MRVRVLLILILTSVLITHAQVLMPRRLRFKELSSNTLGVTWKEPKGAFDSYRLLYSTGSG
EERELIVSKSEPKAVIAGFDRSKEYSVKITAVRGAEQSKALLGTYSGSGSGSEVSDLRGQ
QDSSAAPQDNEIREVDVFTCRTPAIADIVILVDGSWSIGRINFRLVRMFLESLVRAFAVG
SEHTRVGLAQYSGDPRIEWHLNTHSTKEAVIDAVKNLPYKGGNTLTGLALTYILENSFKA
ESGSRPDVPKIGILITDGKSQDDVISPAQRLRDAGIELFAIGVKNADENELRAIASPPEE
THVYNAADFSVMSSIVEGLTRSVCERVSEISREISGETDPYSTGPPDAPSNLVTSEVTAR
SFRVSWTHAAGPVEKYRVVYYSSSESRPEEVVVNGDKNSVVLRHLNSLTEYQITVFAIYS
NAASEALRGSETTLALPTVSDLELHDITHSTMRARWREAEGASGYMILYAPLTEGEPADE
KEVKVSDSVTQVELEGLTPATEYTVTVYALYGEEASDPMTAQETTLRLTPARNLRISDIS
HSSAKLLWDAASRKVKGYRIVYVKTDAVETNKVEVGPVTMLLLRNLTSLTEYTIAIFALY
DEGQAEPLTDSFTTSEVPLPLNLRSSDVSTDSFRVMWQHGASDVSFYRLTWRPVAGGEIK
EVLINDNSNWFVITGLKPLTEYEVSLSAIYRDESESDPVEISETTVARTTTVTTTTVRTT
TAVQRLAVRNLQLSDVTTFSMRVSWDPLGPNVRQYRVSYISTRGDRAEQTATVPAAQTSL
LLQPLLSDTEYRVSVSALYSDGDGPPITRLARTLPLSAPSNLRVSEEWYNRFRISWDTPP
SPTMGYRIVYQPTSAAGRALETFVGDDVNTMLIVNLLSGTEYSVKVIATYTTGSSEALSG
RAQTLYLGVSNLSTFQVRTSSMCVQWQPHQHANLYRLVLHSPPNGEKQEVRLSGSTSRHC
FNDLTPNTQYTISIHAQLQDTEGPAVTTTQRTFPVATAPPTTPSTTAPPPTLPATKEVCR
AAKADLVFLVDGSWSIGDDNFQKIIRFLYSTAGALDRIGPDGTQVAITQFSDDARTEFKL
SSYDNKENLLDAIQRISYKGGNTKTGRAMQHVKDSVFSAVGGARRGVPKVLVVLTDGRSQ
DDVLMVSQEIQTEGYIVFAIGFADADYGELVSIASKPSERHVFFVDDLDAFRKIEEKLIT
FVCEAASATCPSVPMSGSTLPGFRMMETFGLMEHLYSSVSGVSMEPGTFNSYSSFRLGSG
ALVTQPTRFIHPEGLPSDYTISMLFRLLPETPQEPFALWEVLNSNNEPLVGVILDNGGKT
LTYFNTDYNGDFQTVTFEGPDIQKLFYGSFHKLHIAVSKTSALVMVDCKPAGEKTVNAAK
NISTDGVEVLGRMVRSRGAKDNSAPFQLQSFDIVCSTSWARRDKCCELPSLRKEAECPSL
PRACTCTQDSKGPPGPAGPPGGLGIRGARGDRGEPGPVGPVGPVGDAGVPGAQGPPGPPG
PSGRSIRGPPGAPGETGQKGDAGPPGLQGVPGSPGPAGRDGPPGPRGLLGQDGPQGRVGP
PGTIGGPGVPGAPGENGPPGPTGDQGPPGPPGHKGEKGERGELQSSASVQAIARQVCEQL
IQSHMARYNSILNHIPSQPVSIRTVPGPPGEPGRQGSPGPQGEQGPPGRPGFPGSNGENG
QPGARGPLGEKGEKGNPGVGVQGPRGPAGPPGAPGEGRTGSPGQSGRPGNPGSPGRPGIP
GPVGPPGPPGYCDQNACLGYNVGEPGVDADLTDTDVPVVQLPPSSYQPYGPEAEAEDDDP
YGSYTSYYQPNYPPPRPVQPDDPVIGEGEEELRSPGMQRHTRRR
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcgagtgctgctgatcctgatactcacatcagtattaatcacacatgctcaa
gtgctgatgcccagaaggctgcgttttaaagagctgagctccaacacgctcggcgtgacc
tggaaggagccgaagggagcgtttgacagctatagactcctgtacagcacaggctcagga
gaggagcgtgagctgatagtgagtaaatctgagcccaaagccgtcatcgcaggcttcgac
cggagtaaagagtacagcgtgaagatcacagccgtccgaggagcggagcagagtaaagcg
ctgctgggcacatactccggatcggggtcggggtcagaggtgagtgacctcagaggtcag
caggactctagtgccgccccgcaggacaatgagatccgtgaagtggacgtgttcacatgt
agaactccagccatcgccgatatcgtgattctggtggatggatcgtggagcatcggcaga
attaatttccgtttggtgcggatgtttctggaaagtctcgtcagggcctttgcggttgga
tctgaacacacacgtgttggtttggcacagtacagcggggatccacggattgagtggcat
ctgaacactcacagcactaaagaggccgtgatcgacgctgtgaagaatctgccttataaa
ggaggaaacacactcacaggtcttgctctgacgtatattctggagaacagcttcaaagct
gaatctggatccaggcctgatgttcctaagattgggattctgatcacggatgggaaatca
caggacgatgttatttctcctgctcagagactcagagacgctgggatcgagctgtttgct
atcggagtgaagaacgcggatgagaacgagctgagagccatcgcctccccgccggaggag
acacacgtgtataacgcggctgatttcagcgtgatgagctccatcgtggagggactcacc
agaagcgtctgcgagcgtgtctctgaaatcagcagagagatcagcggtgagacggatccg
tattccacggggccaccggatgctcccagtaaccttgtgacctctgaggtcacggccagg
agcttccgtgtgtcgtggactcatgctgcaggcccggtggagaagtacagagtagtgtat
tactcgtccagtgaatccagacccgaggaggtggtggtgaacggtgacaagaactctgtg
gtgttgaggcatctgaactcactgacggagtatcagatcactgtgttcgccatctacagc
aacgcagccagtgaagcgctgagaggcagcgagaccaccttggcactgccgacggtcagt
gatctggagcttcatgacatcactcacagcaccatgcgtgcgcgctggcgagaggcagaa
ggggcttctgggtacatgatcctgtatgcgcctctgacggagggcgagcccgcagacgag
aaggaggttaaagtgtccgactccgtgactcaggttgaactggaaggtttaactcctgcg
actgaatacacggtgaccgtttatgccctgtatggagaggaggccagtgaccccatgacc
gcgcaggagaccacgctccgtctgactccggctcgtaatctgcgcatctcagacatcagt
cacagctctgctaaactcttgtgggatgcagcgtctcgtaaggtcaaaggttaccgtatc
gtttatgtgaagacggacgctgtggagaccaataaggtggaagtgggtccggtcaccatg
ctgttactgcgaaacctgacctctctgacggagtacaccattgccatctttgccctgtat
gatgagggacaagcagaaccgctgacggacagcttcaccaccagtgaggttcctctgccg
ctgaatctccgcagcagtgacgtgtccaccgatagtttcagagtgatgtggcaacacggc
gcgtctgacgtctccttctacagactcacctggagacctgtggcaggaggagagatcaaa
gaggttctcatcaatgataactccaactggtttgtcatcacgggtctgaagcctctgact
gaatatgaagtttctctgtctgcgatctacagagacgaatctgagagcgatccggtggag
atcagcgaaaccacagttgccagaacaacaacagttacgacgacgaccgtcagaacgact
acagccgtgcagcgtctggccgtcaggaatctgcagctgagcgacgtgacgaccttcagc
atgcgtgtatcgtgggatccgctgggtccaaacgtgcgtcagtacagagtgtcgtacata
agtacgcgaggagaccgcgcagaacagacggcgacggttcctgcggctcagacctcgctg
ctgctgcagcctctgctgtcggacactgagtaccgcgtcagcgtctctgcgctctacagc
gacggcgacgggccgcccatcacacgcctcgcccgcacactgccgctctctgctcccagt
aacctgcgtgtgtctgaggaatggtacaaccgcttccgcatcagctgggacacgccgccc
tcgcccaccatgggctacaggatcgtctaccagcccacctcagcggccggccgtgcgctg
gagacctttgtgggtgatgacgtgaacaccatgctgattgtcaatctgctgagcgggacg
gagtacagcgtcaaagtcatcgccacctacaccacgggatccagcgaggccctgagcgga
cgagcccaaacactgtatctgggagtgagtaacctcagcacgttccaggttcgtaccagc
agcatgtgtgttcagtggcagccgcatcaacacgcaaacctgtaccgcctcgtcctgcat
tcgccccccaacggtgagaaacaggaagtgaggttgagtggctccacgtccagacactgc
tttaatgacttgaccccaaacacacagtacaccatcagcattcatgctcagctgcaggac
acagagggacccgccgtcaccaccacacagagaacatttcctgtggccacggctccgccc
accacacccagcaccaccgcccccccgcccactcttcccgccactaaagaagtgtgtcga
gccgctaaagcagatctggtgtttctggtggacggatcgtggagtatcggagatgataac
ttccagaagatcatccgcttcctgtacagcactgccggagcgctggaccggatcggtccg
gatgggactcaagtggctatcacacagttcagcgacgacgctcgcaccgagttcaagctc
agctcgtacgataataaagaaaacctgctggacgccattcagaggatctcatataaagga
ggaaacacaaagacaggccgggcgatgcagcacgtgaaggactctgtgttttcggcggtg
ggcggagccagaaggggcgtgcctaaagtcctggtggtgctgacggacggccgttcccaa
gacgacgtgctcatggtttcccaggagatccaaacggaaggttatattgtgtttgccatc
ggttttgctgatgctgattacggcgagctggtgagtatcgccagcaaacccagcgagaga
cacgtgttcttcgtcgacgacctggacgctttcagaaagatcgaagagaaactcatcacc
tttgtttgtgaagctgcatcagccacgtgtccgtcagtacccatgagcggcagcacatta
ccagggttcaggatgatggagacgtttgggctgatggagcatctgtacagcagcgtgagc
ggcgtgtccatggagccggggaccttcaacagctacagcagcttcagactcggcagcggc
gcgctcgtcacgcagcccaccaggttcatccatccggagggtctgccgtcggactacacc
atctccatgctcttccgcctgctcccagaaaccccgcaggagccctttgcattgtgggaa
gtcctgaacagcaacaacgagccgctggtgggagtcattctggacaacggaggaaagacg
ctgacttacttcaacaccgattataatggtgatttccagacggtgacgtttgaggggccg
gacatccagaaactcttctatggcagttttcataagctgcacatcgccgtcagtaagacg
tcggctctggtgatggtggactgtaaaccggcgggagagaagaccgttaacgcggccaaa
aacatcagcactgacggcgtggaggttctgggacgcatggtgcgatccagaggagccaaa
gacaactctgctccgtttcagctgcagtcctttgatatcgtgtgtagcacgtcatgggct
cgacgggacaaatgctgcgagctgcccagcctgaggaaggaagccgagtgtccgtctctc
ccgcgcgcctgcacctgcactcaggacagcaagggcccccccggccccgccggacccccc
ggaggcctgggcatcagaggagccagaggagaccgaggtgaacccggccctgtgggtcct
gttggtccagtcggggacgctggtgttccaggtgctcaggggcctcccggtcccccgggg
cccagcggacgctccatcagaggccctccaggggctccgggtgagacgggtcagaagggc
gacgccggtcctccagggctgcagggtgttcctggctctcccgggcctgcgggacgcgac
gggcctccaggaccgcgggggctgctgggtcaggacgggcctcagggacgagtggggccg
ccggggaccatagggggtccaggagtgccgggggcgccgggggaaaatggccctccagga
cccacaggagaccagggtcctccgggacccccgggacacaagggagagaagggcgagcgg
ggggaactccagtcctcggcttctgtccaagccatagccagacaagtgtgtgagcagctg
atccagagtcacatggcgcggtacaattccattctgaaccacattcccagtcagccggtg
tcgatccgcaccgttcccgggccgccgggagagccaggccgacaggggtctccaggacct
cagggagagcaggggccgccgggacggccgggattcccaggcagtaacggagagaatggc
cagccgggagcccgaggacctctgggcgagaagggagagaagggcaatccaggtgtggga
gtccagggacccagaggacctgctggaccgccaggagctcctggtgaaggcagaacagga
agtccaggtcaatctggccgccccggtaaccccggcagtcccggcagacccgggattcca
ggaccggttggtccgcccggcccgcccggatactgcgaccagaacgcctgcctcggctac
aacgtgggagagccgggcgtcgatgctgacctcactgacacagatgttcctgtagttcaa
ctgccgcccagctcctaccagccgtatggccccgaggccgaggccgaggacgacgacccc
tacggctcctacacctcctactaccagccaaactaccctccgccgcggcccgtgcagccc
gacgaccccgtcataggtgaaggagaggaggagctgcgctcgcccggcatgcagcggcac
acgcgcagacgctag
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