Onychostoma macrolepis: 131525939
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Entry
131525939 CDS
T09350
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
omc
Onychostoma macrolepis
Pathway
omc04514
Cell adhesion molecules
omc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131525939 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131525939 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omc00535
]
131525939 (sdc3)
Proteoglycans [BR:
omc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
131525939 (sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
BPD_transp_2
Motif
Other DBs
NCBI-GeneID:
131525939
NCBI-ProteinID:
XP_058609934
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Position
19:17368585..17398259
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AA seq
550 aa
AA seq
DB search
MGRRRERQGRRRCLTMLGLQGASSTARGKSTQCPSSSHTRHSVEKRKRERGVLVFPASIS
IRSQPLQSDQRGGNHTSCSSSVLRDLTVPTRDGCADESACPEVGYRKLSERFTPTLEEER
GDESGSPVFCCVRSTMKLPCWMALALLLLLAQTVLAQRRISRPSDDESSGDGFYDDEDLF
SGSGSGFPDMDVSPTAAGVVVTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVEHESG
LGQDVDRDSKLEMEIEKKWEELEEEEMRRAKEQDREQESEIVTTLDADKVQDGEEEQERS
KATVAPRLTDVPLVFVDSSTALDETTVATSDPEDEDLYITAETIMLEASSTPETTTEDIT
TTEIIPTTVASTTAKPTRPRPALTTPSTAPVRPRKPHTTPSRATPTESSTRSVMTTTQTP
TPAETVNNEVAGPGPSGDFEIRENEGRQGNEVRRGKGEPGMAGEPDLSGNTVDAAGSSAA
QLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQ
KPDKQEEFYA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagaagggagaggcagggaagacgtcgatgcttgacgatgcttgggctgcag
ggggcatcctcaaccgcacgaggaaaatccacccaatgcccgtcctcctctcacacacgc
catagcgtagagaagagaaagagagagagaggagttctggtcttccctgcttccatatcc
atcaggtctcagccactccagtcagatcaaaggggaggaaatcacacgagctgctcctcc
tcggtcttgcgggatttgaccgtgccgacgcgagacggatgtgccgacgaaagcgcctgc
cctgaagttggataccgaaaactgagcgaaaggtttactcctacccttgaagaggagcgc
ggagacgagagcgggagccccgtgttttgctgcgttcggagcaccatgaagctcccgtgc
tggatggcgctggcgctgctgctgctgctggcgcagactgtactggcacagcgtcgcata
tctcgaccaagcgatgatgagagttctggagatggattttacgacgatgaggacttattc
tctggatctggctctggctttccagatatggacgttagtccaactgcagcaggtgtggtg
gtcaccacagaagagccccttccactttctaccacacaggccactggccccgccccctca
gcctcccccgccgccgagccaagtagcccacctccacctgaggtggaacacgagagcggc
ttgggacaagatgtagacagagacagcaaattggagatggagattgagaaaaagtgggag
gagcttgaggaggaggaaatgagacgggcgaaggaacaggacagagaacaggaatctgag
atcgtgacaacgttggatgctgataaagtgcaagacggagaggaggaacaagagaggtcg
aaagctacggttgccccccggctgactgatgttcctctagtgttcgtggactcatccacc
gctctggatgagactacagtggccaccagtgacccggaggatgaggatctatacattact
gcagaaaccatcatgttagaggcatccagcacaccggagacgacaacagaggacatcaca
accactgagatcatcccaaccactgttgcgtccaccactgctaagccaaccagaccacgt
cctgccctgaccactccgagcaccgccccggtacgaccccggaaaccacacactaccccc
agtagagccaccccaactgagagcagcactcgttcagtgatgaccacaacacagacacca
acaccagctgaaactgtaaataatgaagttgcaggaccaggtccaagtggtgattttgaa
atccgcgagaatgaaggtcgccaaggcaacgaggtcaggagaggcaaaggggagcctggc
atggcaggagaaccagatttgtctggtaacacagtagatgctgctggaagctcagccgct
caacttccacagaagaacatccttgagaggaaggaagttttgatagcggtgattgtcgga
ggtgtagtcggagcactcttcgcagcattcctcgtaatgttactcgtctaccggatgaaa
aagaaagatgaaggcagctacacattggaggagcctaaacaagccaccgtcacctaccag
aaaccagacaagcaggaagaattctacgcctaa
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