Onychostoma macrolepis: 131525984 Help Entry 131525984         CDS       T09350                                  Symbol skic2 Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism omc  Onychostoma macrolepis Pathway omc03018   RNA degradation Brite KEGG Orthology (KO) [BR:omc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     131525984 (skic2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:omc03019]     131525984 (skic2) Enzymes [BR:omc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      131525984 (skic2) Messenger RNA biogenesis [BR:omc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      131525984 (skic2)   mRNA degradation factors    3'-5' decay     Ski complex      131525984 (skic2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel Helicase_C DEXQc_Suv3 MTR4-like_stalk ResIII DUF3516 HTH_23 Motif Other DBs NCBI-GeneID:  131525984 NCBI-ProteinID:  XP_058610009 LinkDB All DBs Position 19:complement(8147664..8172617) Genome browser AA seq 1251 aa AA seqDB search MDKIDLPPVGPDDLPLSLLEMGCSGRFELITHPLPKNKPLPPHSTLPHGLPPTCLDLKTE VEKRFLQDPAWLPVHDVDDAFHKFLKISTRDKEVDSLLHCSLSPLHSGLSVVRDPTTGML LDFTEVLLVDTGLSAKNSLSLQRQPGPPSESLRGSNTNYPFLPAGMEELTLEQIKKKSEL EEDIDFAKDLLTVPPGLKAGMDFSDKEAKTTKSAVNLLSLLSTFDDAIDALPEEKEGVSQ KEETVKLPRTNSLEDLGIKDSGNSPSQPSANTVSLSEQKKKLQQEGKGDHKKWAIPVDIT SPCEDFYKRIPDPAFKYPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYAIALSQ KHMTRTIYTSPIKALSNQKFRDFKNTFRDVGLLTGDVQLSPESSCLIMTTEILRSMLYNG SEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVSIILLSATVPNAVEFSEWIGRI KKRHIYVISTVKRPVPLEHYLYTGNSTKTQKELFLLLDPTGNFLTKGYYTAVDTKKERTS KHAQSFGTKNVSQHNTTASQDRAVWQTLLNYLSQRQQTPVVAFTFSRTRCDENARSLTSL DLTSSIEKSEIHSFLQKSLTRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPILKEIIEM LFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGL DATGTVIILCKAGVHDMGDLHAMMLGKPTVLQSQFRLTYTMILNLLRVEALRVTDMMRRS FSENHRDTQAHEKRISELRNTVSSLPPLDTEGQLSDILSYYHTITELRITTETLQRAVLE SMNGLKALSVGRVVIVNNGQHHNALGVILQVSNDAVNRTFTALIICEKGNEEAAGDDQSN KVLHLIYSTSLFIPEGPCSHTVQKLKLQDVSAITAKTLKVIPERIIDNYNKRQQPRFRLD PPGQAISTATQELLRLAEANPNGITTLDPVNDLHLKGVDVVEGVIRQRVLQDCLKDFHCI HSPTFTEQFARVQERMSVQEELDKLLFLVSDQSLTLLPDYHQRIKVLEALQYVDSTGAVQ LKGRVACQISSHELLLTELLFENTLSPLAPEESAALLSCLIFTQNTQINPHLTNTLQEGI NQVLNVAQRIGELQRDCGIAQTAEDFVAQFKFGLTEVVYCWARGMPFSEIAQLTDVQEGT IVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLYTH NT seq 3756 nt NT seq  +upstreamnt  +downstreamnt atggacaaaatagatttgcccccagtgggtcctgatgatttgcccctgtctctgctggag atgggctgctcggggagatttgagctcatcacacacccactgcccaaaaacaaacccctg cctccacacagcacgcttccccatgggctccctcctacttgtctggatctaaaaacagag gtagaaaagcgttttctccaagaccctgcttggcttccggtacacgatgtagatgatgcc ttccacaagttcctgaagataagtacgcgagacaaagaggtggactcactcctgcactgc tcactgtctccactgcactccggtctgtctgtggtcagagatcccaccaccggtatgctg ctggatttcactgaggtgttattagtggacacaggattgtctgccaaaaattctctgtca ttacaaagacagcctggacccccatcagagagcctgagagggagcaacacaaactatcca ttcctgccagctggaatggaagaactgacgttagagcagattaagaaaaagtcagagctg gaagaagacattgactttgcgaaagatttgttgacggttcctcctgggctgaaggctggt atggacttcagtgacaaagaagctaaaaccacgaagagtgcggtgaacctgctttccctc ctgtcaacctttgatgatgccattgacgctctgcctgaggagaaagagggagtttcacaa aaagaggagactgttaaacttcccagaactaacagcctggaggacctgggaattaaagat tcaggcaactctccttctcagccttcggcgaacacagtaagtctgagtgagcaaaagaag aaactgcagcaagaaggcaagggagaccataaaaaatgggccattcctgtggacatcacc tcaccctgtgaagacttctacaagcgtatccctgatccggccttcaagtatcccttcgag ctggacgtgtttcagaagcaggctattctccgactcgaagctcatgactctgtgtttgtc gcggctcacacatcagctggcaagactgtggtggctgaatatgcaattgcactttcccag aaacacatgaccaggaccatttacacgtcccccattaaggccttgtccaatcagaagttc cgagacttcaagaacacgttcagggatgtgggacttttgactggagatgtccagctgagc cctgaatcctcgtgtctcatcatgaccactgagatcttgagatctatgctctataacggg tccgaggtcattcgagatctggaatgggtcatttttgatgaggttcactatatcaatgat gcagagaggggagtggtgtgggaggaagtgctcatcatgttgccggagcatgttagcatc atcctgctgagtgccacagtgccaaacgcagtggagttcagtgaatggattgggcgtatc aagaagcggcacatctatgtgatcagcacagttaaaaggcctgttcctctagagcactat ctgtatactggcaacagcaccaagactcagaaagagctcttcctgttgctggaccccact ggaaacttccttactaaaggctactataccgcagtagataccaagaaggaacgcactagt aaacatgcacagtcttttggcacaaagaatgtatcgcagcacaacacaacagccagtcag gatcgagccgtgtggcagacgctgctgaactatctgtctcagaggcagcagactccagtg gtggcgttcacattctctcggacacgctgtgatgaaaacgcccgctctttgacctctctg gacctcaccagctccatagagaagagcgagatccactccttcctgcagaagagcctgacc aggctgagaggaggcgatcgccagttaccgcagatcctgttgatgcgtgatttgctaaag agagggattggtgttcaccacagcggcatcctgccaatcctgaaggagattattgagatg cttttctccagaggtttagtaaaggtgctgtttgctacagagacgtttgctatgggtgtg aacatgcctgccagaaccgtcgtgttcgacagcatccgcaaacatgacggcacgggtttc agaaacctgctgcctggtgagtacatacagatggcgggccgtgcaggcagaagaggtttg gatgctacagggaccgttatcatcctctgtaaggctggagttcatgatatgggagacctc cacgccatgatgctggggaagccgacagtcctgcagtctcagttcagactgacctacacc atgatcctgaatctgctgcgtgtggaggccctgagggtcaccgacatgatgaggaggagc ttttctgagaaccacagggatacgcaggctcacgagaagagaataagtgaactgaggaac acagtctcctctctccctccgctggacacggaggggcagttatctgatatactttcatat taccacaccatcacagagctgcgcatcaccacagagaccctgcagcgagctgtgctggag tcaatgaatggactcaaagctctgtctgtggggagggtggtaatagtgaacaatggccag catcacaacgccctgggagtcattctacaggtgtccaacgatgcagtaaatcgcactttc accgctctcattatctgtgagaagggtaatgaggaggcggcgggtgatgatcagtctaat aaagtcttacatctcatctacagcacttcactgtttattccagagggaccctgcagtcat acggtgcagaaactgaagttgcaggacgtctctgccatcacagccaaaaccctcaaggtc attccagagagaatcatcgacaactacaataaaagacagcagccacgcttcagactggat ccaccaggtcaagctatttctacagcaactcaggagctcctgcgattggctgaggccaat ccaaatggcattacaacccttgaccctgtgaatgacctgcacctgaagggtgtggatgtg gtggagggagtgataaggcaacgagtgttacaggactgtctgaaagacttccactgcatc cactcgcccaccttcactgaacagtttgcgcgtgtgcaggagaggatgagtgtacaggag gagcttgacaagcttctgttcctggtgtcagatcagtcattgacactgctgcctgactac catcagagaatcaaggtgttggaagcgctgcagtatgtggacagcactggggcggttcag ctgaagggtcgtgtggcgtgtcagatcagcagtcatgagctactgctgactgaactcctg tttgagaacacactgagtcctctcgccccggaggagagcgccgccctgctgtcctgcctc atcttcacgcaaaacacccagatcaacccgcaccttaccaacacgctacaagagggcatc aatcaagtgctcaatgtggcacagcgtattggtgagctgcagagggattgtgggatagct cagactgctgaagactttgtggcccagttcaagtttggcctgactgaggttgtatactgc tgggcaagaggcatgccgttttctgagattgcgcagctgacggatgtgcaggaggggacg atcgtacgctgcatccagaggctggacgaggtcctgaaggaagtgagacaggctgcgcgc attgtgggcgactccgtcctgggcagcaagatggaaagagcctcactggccatacgcaga gacattgtgttcaccgcatcgctctacacgcactga

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