Onychostoma macrolepis: 131526110
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Entry
131526110 CDS
T09350
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131526110 (prdm1b)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
131526110 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_jaz
zf-C2H2_11
STL11_N
Zf-C2H2_ZNF451_C
B129_C2H2-zf
zf-Vps39_C
zf-MYST
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
131526110
NCBI-ProteinID:
XP_058610201
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All DBs
Position
19:19712567..19747299
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AA seq
695 aa
AA seq
DB search
MKLEASLEDMSEWREVDFALNCTYIVHDQASEPNFSLPKAMTSIPRNLTFQYSTDNQVTG
VFSKEYIPQGTRFGSLQGVIYTKENVPLQTNRKYFWRIYSGGHLHHFIDGYDVHHSNWMR
YVNPARSLAEQNLVACQNGQEIFFYTIRPVEPKQELLVWYSPEFSQRLCGQQEQPDSLKP
KYIPDIEYQKQPLPQYSYYPKQPPSPHKLHSEGQEDEVDEKIDVEVIERDTPPDTPDEQV
VDFSKKIHKAASPEPVHSSHPNQKEMNINIHPYPTLSPPQDLPLHLHGLYGHREGLISYP
SLPSPRPLQAPYPLLPPYSPHYSRLLLPSYSPPFPSMLPSKGGLRYNGFLGSDGFPYPSI
PQPGLLPVTLPYPTPLHGGLKERIPNTPPRGAPATPELSPQPKQCPQQTFQKPLFECEEA
INLSLATPKSMSPSSSSSPPAPGYKSLPYPLKKQNGKIKYECNVCLKTFGQLSNLKVHLR
VHSGERPFQCNLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSG
EKPYQCKLCGVKFTQYIHLKLHRRLHSSRDRPHSCQACTRGFIHRFSLNLHHRSGFCPTA
RPEIPELRRAAELVERFDASQEAEALPESAGEAQVDAVLEKWLARSLESGEGKEDIGFLK
AVAAVPHGVTAMGHHQERASVVHFSHRPSIKTEEE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggaggcatctctagaggacatgagcgagtggagggaggtggactttgccctg
aactgcacctacatcgttcacgaccaggcatccgaacccaacttcagcctacccaaggcc
atgacctccattccacgaaacctcaccttccagtacagcacggacaaccaggtgactggc
gttttcagcaaagagtacatacctcaaggtacacgattcggatctcttcaaggagtcatt
tacaccaaagaaaatgtgccccttcagaccaaccggaaatatttttggaggatctacagt
ggtggccacctacaccacttcattgatggctacgatgtccaccacagcaactggatgcgg
tacgtcaacccagcacgatcgctggccgaacagaacctggtggcctgtcaaaacggccag
gagattttcttctacaccatccggcccgtggagcccaagcaggagctgttggtgtggtac
agcccggagttctcccagagactgtgcggccagcaagagcaaccagacagcctaaagcca
aagtacatacctgatatcgagtatcagaagcagcccctacctcagtactcctactaccct
aaacagcccccaagcccacacaaacttcacagtgagggacaggaagatgaggtggacgaa
aagatcgacgtagaggttattgagagggacacgccacctgacacaccagatgaacaggtc
gtggatttcagcaagaagatccacaaagctgcttcgccagagcctgtccattcttcacat
cccaaccagaaagagatgaacataaacattcacccatatcccaccttgtccccaccgcaa
gaccttccgctccacttacatggcctctatggtcatcgagaaggtctgatctcataccct
tcgttgccctcacctagacccctgcaagctccatatcccttattaccaccatacagccct
cattattcacgtctgctcttgccttcatactcccctcccttcccttccatgttgccctcg
aaagggggtctccggtacaacggattcctgggtagtgatggctttccctacccttccata
ccccaaccaggtctgttaccagtcacattgccctatcctaccccacttcatggaggtctg
aaggaaagaatcccaaatactccaccccgaggagcccctgcaacgcccgaactctcccct
cagccaaagcaatgccctcagcaaacgttccagaagcctctctttgaatgcgaagaggcc
attaacctcagcctggctacacccaagagcatgtcaccttcatcctcgtcctctccaccg
gcacctgggtacaagtctctcccgtacccgctcaagaagcagaatggcaaaatcaagtat
gaatgcaacgtctgtctcaagacattcggacaactgtccaacctcaaagtgcacttgagg
gtccacagtggagagaggccattccagtgcaacttgtgcaaaaagagtttcacccaactc
gcacacctacagaaacatcacttggtccacacaggagagaaaccacatgagtgccaggtg
tgccacaaacgcttcagcagcaccagcaacctgaaaacccacctacgcctgcactccgga
gagaagccgtatcagtgtaagctgtgtggcgtgaagttcacccagtacattcacctcaaa
ctccaccgtcggctgcacagctctcgtgaccggccccactcctgccaagcctgcactagg
ggcttcatccatcgcttctcactgaacctccatcatcgctccggcttctgccccaccgcc
cgtcctgaaatcccagagctgaggcgtgcagcagagctggtagagcgctttgacgccagt
caggaggccgaggctctgcctgagagtgctggagaggctcaggtggacgctgtcttggaa
aagtggttggctagaagtttggagagcggcgaggggaaggaggacattggattcctcaag
gctgttgctgcagtacctcatggggtaaccgccatgggtcatcaccaagagagagccagc
gtggtacacttcagccaccggccctctataaagactgaagaggagtag
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