KEGG   Onychostoma macrolepis: 131526297
Entry
131526297         CDS       T09350                                 
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
omc  Onychostoma macrolepis
Pathway
omc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131526297 (snrpd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omc03041]
    131526297 (snrpd1)
   03032 DNA replication proteins [BR:omc03032]
    131526297 (snrpd1)
Spliceosome [BR:omc03041]
 Complex A
  U1 snRNP components
   Sm proteins
    131526297 (snrpd1)
  U2 snRNP components
    131526297 (snrpd1)
 Complex B
  U1 snRNP components
    131526297 (snrpd1)
  U4/U6.U5 tri-snRNP components
    131526297 (snrpd1)
 Complex C
  U2 snRNP components
    131526297 (snrpd1)
DNA replication proteins [BR:omc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     131526297 (snrpd1)
SSDB
Motif
Pfam: LSM EBNA2_Core Gemin7 Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 131526297
NCBI-ProteinID: XP_058610505
LinkDB
Position
19:29384966..29386520
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaaactcgtcaggtttttgatgaaactgagccatgaaacagtcactattgagctgaag
aatggcacacaggtccacgggacgattacaggtgtggatgtcagtatgaacactcacctc
aaagctgtgaagatgaccctcaaaaacagagagcccactcagctggagtctctcagtatc
cgtggcaacaacatccgctacttcatcctgcccgacagtcttcctctggacacgctgctg
gtcgacatcgagcccaaagtcaagtcaaagaagagagaggctgttgctggccgcggtcga
ggaagaggacggggtcgcggcagaggaagaggtcgtggccgtggcgggccgaggagatga

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