Onychostoma macrolepis: 131526785
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Entry
131526785 CDS
T09350
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omc
Onychostoma macrolepis
Pathway
omc04137
Mitophagy - animal
omc04140
Autophagy - animal
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131526785 (hif1ab)
04137 Mitophagy - animal
131526785 (hif1ab)
04148 Efferocytosis
131526785 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131526785 (hif1ab)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131526785 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Cas_Csn2
Rbsn
Motif
Other DBs
NCBI-GeneID:
131526785
NCBI-ProteinID:
XP_058611268
LinkDB
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Position
20:complement(13358179..13378124)
Genome browser
AA seq
774 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLSSDDSDKENELESQLNSFYLKALEGFLMVLSEDGDMVYLSENVSKSMG
LTQFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCAGHVRVLERGECSGDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDIVLSLQQTVTEPK
AEEKENQEMEDEASEVDILKLFKPESLKCPMKSPDLYEKLKEEPEALTVLAPAAGDTIIS
LDFNNSDSDMQLLKEVPLYNDVMLPSSSEKLPISLSPLTPSDSTPVLTNLETGAEDFPFS
SASDLGPDSTNTPSTSGLGSSGPNSPMDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPF
SSQAMEDLDLEMLAPYIPMDDDFQLRIPSPLDPIPSGPHSVSAMSSLFQPLPSPASPASS
SSSTVKQEPSSRAPSPLHLLQEVCNAPVSPFSGTRDVSPARSPTPQSSNQINNRELSPKM
LAIQNAQRKRKLEEVTSLSEAVGLSALLQSVDSAIEPGKRAKVLEVKGSSLLGGNKTILI
LPSDVASRLLCSSFENSSGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcgcgatctcgcaggggaaaggagtccgaggtgttctacgagttagca
caccagctccccctgccacacaatgtcacctcccacctggacaaagcctccatcatgagg
ctgaccatcagctacctgcgcatgaggaagctgctcagctctgatgactcggataaggag
aatgagctggagagtcagctgaacagcttttatctgaaggcactggagggtttcctcatg
gtcctgtctgaagatggagacatggtttatctctctgagaatgtcagcaagagcatgggc
ctcacacagtttgatctgactggtcacagcatctttgaattttcacacccatgtgaccat
gaggagctgagagagatgctggtccacaggacaggatccaaaaagaccaaggaacaaaac
acagagcgcagcttcttcctgcgtatgaagtgcacactcactagcagagggcgcactgtc
aatatcaagtctgctacatggaaggttcttcactgcgcaggtcatgtgcgtgtgctggag
cgcggtgagtgttcgggagactctggctttaaagagcctcctctgacctaccttgtgctc
atctgtgagcccattcctcatccctcaaacatcgaggtgcctctggacagcaagaccttc
cttagccgccacactctggacatgaagttttcgtactgtgatgaaaggatcacagagctg
atgggatatgagccagatgacctgctgaacaggtctgtgtatgaatactatcatgccctg
gattcagatcaccttaccaagacacatcacaacttgtttgcaaagggccaggccaccaca
ggccagtaccgcatgctggctaagaaaggtggttttgtgtgggtggagactcaggccacc
gttatctacaaccccaagaattctcagccacagtgcattgtgtgcgtcaactacgttctc
agtggcattgtggagggggacattgtcctgtccttgcagcagaccgtgaccgagcccaag
gctgaggagaaagagaaccaggagatggaagatgaggcctctgaggtggacatactcaaa
ctcttcaagccagaaagcctcaagtgtcccatgaagagccctgacctgtatgagaaactg
aaagaggagcctgaggctctcactgtgttggcacctgctgcaggagacaccatcatctct
ctggacttcaacaactcagattctgacatgcagctgctaaaggaggtgcctctctacaat
gatgtcatgctgccctccagcagcgagaagctccccatcagtctgtctcctctgacaccc
agcgactccaccccagttctgaccaacctagagaccggagcggaggacttccctttcagc
tctgcctctgatcttggtccagactccacaaacacaccttccacatctggactgggctcc
tcagggcccaacagcccaatggactactgtttccaagtagactctgacatcagttctgaa
ttcaaactggacctggttgagaaactgtttgctattgataccgaggcaaagacacctttt
agctcccaggccatggaggatctcgacctagagatgctggctccatacatccccatggat
gacgacttccagctgcgcatcccctctccgctggatccgatcccctctggccctcactct
gtgtcagccatgagctccctgttccagcccttaccctcccctgcgtctccagcctcttcc
tccagcagcacagtgaagcaggagccgtcatctcgggccccttcgcccctgcacctgctg
caggaggtctgcaatgccccagtctcacctttcagcggcactcgggacgtttcccctgct
cggtcccccaccccacagagcagcaatcagatcaacaacagagagctgtctccaaagatg
ttagctatccagaacgcccaacgtaagaggaagctggaggaagtgacatcactttctgag
gctgttggactgagtgctttgcttcagagtgtggacagtgctatagagcctggaaagagg
gcaaaggttttagaggttaaaggatcgagtttgcttggaggaaacaaaaccattctcata
ctgccctctgatgtggccagtcgtctgttgtgcagttctttcgagaacagcagtgggctg
cctcagctaacacgttacgactgcgaagtcaacgctcctgtgcaggaccgccatcatctg
ctgcagggagaggagctcctgcgtgctctggaccaagtcaactga
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