Onychostoma macrolepis: 131526837
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Entry
131526837 CDS
T09350
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omc
Onychostoma macrolepis
Pathway
omc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131526837 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131526837 (smarcd3a)
03036 Chromosome and associated proteins [BR:
omc03036
]
131526837 (smarcd3a)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131526837 (smarcd3a)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131526837 (smarcd3a)
PBAF complex
131526837 (smarcd3a)
GBAF(ncBAF) complex
131526837 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131526837
NCBI-ProteinID:
XP_058611423
LinkDB
All DBs
Position
02:complement(20832009..20854644)
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AA seq
504 aa
AA seq
DB search
MEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGMPN
PALDPNRKRPAPTQPVQPPPVQNRPRKKPLGFPAANEISARQMDMRDAQSDPSVGSFNAK
RRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRL
YISNTFNPAKPDAEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYGP
DNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQT
RSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDPI
VINHVISVDPNDQKKTACYDIDVEVDDPLKSQMNGFLLSTANQQEIASLDNKIHETIESI
NQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTVGNPEEERRAEFYNQPWSQEAV
SRYFYCKIQQRRQELEQALALRTT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctgccggaggagctcgtaaagccaccaagagtaaactgtttgagtttctc
gtccatggagtgcgtccagggatgacctcaggggcacggatgccccatcaaggcgctccc
atggggcctcctggacctccatatggaggaacaccgccaattcggccagggatgcctaac
ccagccctagaccccaaccgaaaacgtcctgccccaacccagccagtgcaacctcccccc
gtccagaaccgtcccagaaagaaaccacttggatttccagcagcaaatgagatatcggca
agacagatggacatgagagacgcccaatcagatccttcagttggatccttcaatgccaag
agaagaaaaatggcagacaagattctccctcagaggatccgtgaactggtgccagagtcc
caggcgtacatggacctcctggcttttgagcgcaaacttgaccaaaccattatgaggaag
agggtggatatacaagaagccctcaaaagaccaatgaagcaaaagcgaaagctacgattg
tacatttcaaacactttcaaccctgccaaacccgacgcagaggactctgagggcagcatt
gcatcctgggagctgcgtgtagagggcaagttgttggatgatcctggaaaacaaaagagg
aagttttcctctttctttaagagccttgttattgagctggataaggatctgtacggccct
gacaaccacttagtggagtggcaccgcactggaacgacccaggagacagatggcttccag
gtgaagaggcctggcgatgtgaatgtgcgctgtaccctcttgcttatgctggattaccag
cctcctcagtttaagttggatcctcgccttgcacgtctccttggcatccacactcaaacc
cgctcctgcatcatccaggctttatggcagtacgtcaagaccaacaagctgcaggattct
catgaaaaggagtacatcaactgtgataaatattttcagcagatctttgactgtcctcgt
ctgaagttttgtgagatcccccagcgactaaccaatctgctgctcccgcctgatcctatt
gtgatcaatcatgttatcagtgtggatccaaatgaccagaagaagacagcctgctatgac
attgatgttgaagttgatgatcctctgaagagtcagatgaatggtttcctgctgtccacc
gccaatcagcaagagattgcatccctggacaacaagatccatgaaactattgagtccatc
aaccaactgaagattcaaagagatttcatgctcagcttctccagagaccccaagggctac
atccaggactggatctgctcccagaaccgggaccttaagctgatgacagatacagttgga
aatccagaggaagagagaagagctgagttttataaccagccctggtctcaggaagctgtc
agccgctacttctattgcaagattcaacaacgaagacaggagcttgaacaagctttggca
ttgcgaacaacctaa
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