Onychostoma macrolepis: 131526872
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Entry
131526872 CDS
T09350
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
omc
Onychostoma macrolepis
Pathway
omc04517
IgSF CAM signaling
omc04520
Adherens junction
omc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131526872 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
131526872 (afdna)
04530 Tight junction
131526872 (afdna)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RASSF8-10_RA
RA_3
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
131526872
NCBI-ProteinID:
XP_058611511
LinkDB
All DBs
Position
20:26158979..26274065
Genome browser
AA seq
1929 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKRTLTNGPEKEKEGVIQNFKRTLSKKEKKKEKKREKEAFSRIPD
GDDHTLNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDG
RPDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVIH
ANDKPVKETILDDTDCPLQILRDWTSDKEALVFQLKKRPPDYAPRKGRKPDNRMGPPHGS
IPPEKLPYLVELSPGRGSHYAYYYRHHEDGSDSRDKPKLYRLQHSVTEVGSDQSEDGNIQ
LFGPGILPHHCDLMHADGLVTVTPVSLDAETFVDGQRISDTTVLRSGVTVQFGATHVFKF
VDPSYDHSMSKRDPGPMMKGRHKSGSVPETTFDLHGDVHSGSALPTSKSSGKLEMERSGN
SERGLVKPMIRGEQQDFNKHDGRSQDGPELSLPASIEFRENSEDAFLSAIINYTNSSTVH
FKLSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIAIVNKMVSMMEGVIQEIAEGDQKQK
NIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYM
PAFLEDPDEQNPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFVNMWLFNKL
VTEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYTMQD
VQNINNTCFKLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQ
LEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLEPLCQRSFCRLTPHPRSPGTWTIYFE
GADCDSHFSADTSELPMRKEPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGG
AADMDGRLAAGDQLLSVDGRTLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLN
QPSPMMTRASDRGRGDKGKMRPKSEGFELYNNSVQNGSPESPQGTWDTYPEPKKEDRLLK
NRADHRSSPNVANQAQSPGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTY
PREYFTFPASKSQDRMGPGQPWQNNEPEVLPPMDNHSNNSMAMQRVARSQEELCEMPGGY
PGEHLRQEDLMHLQQQQRDAEYQRGGGEHWNHQMSSSVESSTSSQEHLNFSSSSGSRIQG
NHKSGPGRWKTPIAPHSGPVSVSQPSRSDLPPPPPPPPAHYDYEPQTDLPLPPPPSITQQ
QAAAAAATADRKKREEQQRWYEKEKARLEEERERKRRDQERKLVQIRNPPGPVMHNNQHG
PLPPAPQHQQMPHPQPPMQVPQPYLPPVQPPQPPQPQPTRPDKLSSLPRQPPQDTVIRDL
LPQQQPRTIERRDLQYITISKEELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQ
ELQAKPERTAEDNDRLRKLMLEWQFQKRLQESKQNEEDEEEEDDEDVDTTLIMQRLEAEK
RARLQDEERRRKQQLEEIRKREAEERAKQEEERRWREEERARRETDEKRRQEEDYYTRLE
AERRRQHEEAERKLLTPDEPGLYRPPLPRDYQPPSPASTPATNNNSAPPPPPQRNTSYLK
TQVASPDTIYTAKFVSYNDEEEEEEDEEDAGLTGQVKLSATRKSYGDLPPPPKPQPPPTA
RKPRPVSDGIFLSNSFQLPAAANANSTAPKAGQPPLPPTKPSFIPSANSKGFNSYTGNTT
GLGSGEIYKDPREKWTKGSPDQENTIGGAPENLTFKERQRLFSQGKEVSNKVKASRKLME
LENELNIKQ
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccaaccgaccgaggacttggagttccatggc
gtgatgcgtttttacttccaggatcgtgtggcggggaacttcgccacaaagtgtatccga
gtgtccagcacggcgaccacgcaggatgtgatcgagacgctggcggaaaagttcagaccg
gatatgaggatgctgtcttctcccaaatactccctctatgaggtccacgtcagtggcgaa
gagaggaaactggacttggacgagaaaccactggtcgtacagctgaactggaacaaagac
gacagagagggccgctttgtactcaagaacgagaacgacatcattcccaagagaactctg
acaaatggtcctgagaaagagaaggagggggtgatccagaacttcaaaagaacactgtcc
aagaaggagaagaagaaagagaagaagagggagaaggaggccttttccagaattccagat
ggagacgatcacacactgaaccgcgaggatggagagaactccaggttggctgctgaggta
tataaagacatgccagagaccagtttcacaaggaccatttctaaccccgaggtggtgatg
aagaggagacggcaacagaagctggagaagagaatgcaagaattccgtagcggagacggt
cgaccggattcaggagggactctgaggatctacgctgatagtctgaagccaaacattccc
tacaaaaccatcctgctctcaactactgatatggctgactttgctgtggccgaggctctg
gagaaatacggcctggagaaggaaaatcccagagattactgcattgcccaggtgattcat
gcaaatgataaaccagtgaaggagaccatactagacgacacagattgccctctgcagatt
ctcagagactggacaagcgacaaagaggctttagtattccagctgaaaaagcgtcctcca
gactacgctccaaggaaaggacgtaaacccgacaacaggatggggccacctcacggatcc
attcctcccgagaaactaccctacctggttgaactgagcccagggcgagggagtcactat
gcctactactaccgccatcatgaagatgggtcagactccagggataaacccaaactttat
cgactacagcacagcgtcactgaggtcggatctgaccagagtgaagatggaaacattcag
ctgtttgggcctgggattctgcctcaccactgtgacctgatgcatgcggatgggctagtg
accgtgacccctgtcagtttggacgctgagacgttcgtggatggacagcggatctctgac
actacggttctgcgcagcggcgtgacggtccagttcggagccactcacgtcttcaaattc
gtagaccccagctatgaccacagcatgtccaagagagacccagggcccatgatgaagggc
agacacaaatcaggaagtgtcccagagacgacctttgaccttcacggggatgttcatagt
ggctccgccctccctacaagcaagagctcagggaagctggagatggagcgctcaggaaac
agtgaaagaggcctggtgaaacccatgattagaggagaacagcaggactttaacaaacat
gacggaaggtcccaggatggcccagaactctctctgccggccagcatcgagttcagggaa
aactccgaggatgccttcctatccgccatcattaactacaccaacagctcaacggtgcat
ttcaagctgtcccccacctatgtgctgtacatgacctgccgctacgtcatgtccagccaa
taccggcccgacatcagcccctctgagcgaacgcacaaggtcatcgccattgtcaacaag
atggtgagcatgatggaaggagtgatccaggagattgctgaaggtgatcagaaacagaag
aacatcgccggggctctggccttctggatggctaacgcctcagagctgctgaacttcatc
aaacaggacaaggatctgagtcgcatcacgctagatgcacaggatgtcctcgctcaccta
gttcagatggcttttaaatacctggtgcactgcctgcagtcggatctgaataactacatg
ccagctttcctggaagatcccgatgagcagaacccacagaggcccaagatagatgacgtt
ctgcacacgctaacgggcgccatgtctcttctgcggcggtgtcgtgtcaatgcggccctc
accattcagcttttttcgcagctcttccacttcgtcaacatgtggctctttaacaagctg
gtgacggaggccgactcgggcctgtgctcgcactactggggcgccatcctacgacagcag
ctcagccacatcgaggcgtgggctgagaaacagggtttggagctggccgcagactgccac
ctcagtcgcatagtgcaggcaacgactctcctcaccatggacaaatacaccatgcaggat
gtgcagaacatcaacaacacctgcttcaagctcaactccctgcagctcaacgctctgctg
agcaactaccactgcgctcctgatgaaccctacattcctcctgagctgattgatcacgtg
gtggctgtggccgagaacacggcggacgaactggcccgaagcgatgggcgggaagtacag
cttgaagaggaccctgacctccagctgcctttcctactgcctgaggatggctactcatgc
gatgtggtgcggaacattcccaacggattccaagagttcctagagccactttgccagaga
agtttctgtcgattgacacctcatccacgctctccgggaacttggaccatctattttgaa
ggagctgattgcgatagtcacttctcagctgacacgtcagaactgccaatgcggaaggaa
ccggaaattgtgacagtgactttgaagaaacacaatgggatgggcctcagtattgtggcg
gccaagggtgccggacaggacaaacttggtatttacatcaagtctgttgtcaaaggaggt
gcggcagacatggatggacgtctggctgccggagaccagttgctcagcgtggatggaaga
actctggttggcctctcgcaggagagggcagcggaattgatgacacgaaccggctctgtt
gtaacgctcgaggtggccaaacagggagccatttaccacggcctggccacgcttctcaac
cagccgtcccccatgatgacccgcgcatcagaccgtggacgtggagacaagggaaagatg
agaccaaagagcgagggctttgagctttacaacaattctgtgcagaatggctcacctgag
agcccccagggcacgtgggacacctatcctgaaccaaagaaggaggacaggttgttgaag
aaccgtgcagaccaccgctcaagcccaaatgtggctaaccaggcccagagtccaggcggg
aagcctgtttacccaggagccccaggaaagatcacttcggtctcgacgggtaacctctgc
cctgatgaggagccctctccaccccgtccagaggcgtatcccatccccactcagacgtac
ccaagggaatacttcaccttcccagcctccaaatctcaggataggatgggccctggccag
ccctggcaaaacaatgaaccggaggttctcccccctatggataaccactctaacaacagc
atggctatgcagcgggtggcgcgctctcaggaggagctgtgcgagatgccgggtgggtac
ccaggtgaacacctgcgccaggaagacctgatgcacctgcagcagcagcagcgtgatgcc
gagtaccagcgaggcggtggggagcactggaaccaccagatgtcctcatctgtggagtcc
agcacctccagccaagagcacctcaacttctcctcgtcttccggctccaggatccaaggc
aaccacaagagcggccctggccgctggaagaccccgatagcaccccactccggccccgtg
agcgtctcccaaccttcccgttcagatcttccacctcctcctcctcctcctcctgcgcac
tatgactacgagccgcaaactgacctgccgcttcctcctccgccctctattacacagcaa
caggctgcagccgccgcggccacggctgaccgcaagaaacgcgaggagcaacagcgctgg
tatgagaaggaaaaggcccggcttgaggaggagcgagaaaggaagagaagagaccaggag
aggaagctggtgcagattcgcaaccctcccggcccagtcatgcacaacaaccagcacggc
ccattgccgcccgcccctcagcaccaacagatgccccatccacagccccctatgcaggtt
ccccaaccgtaccttcccccggtccagccgccccaaccgccacagccacaacccactcga
cccgacaagctatccagccttccccgccagccgccacaggacacggtaattcgtgacctc
ttgccccagcagcagccacgcaccatcgaaagacgtgacctgcaatacatcactatcagc
aaagaggagctgtccgccagcgacagcctctcgccagacccctggaagagggacgcccga
gagaaactggagaagcagcagcagcttcacatcgtggacctcctagacaaggagatccag
gagcttcaggccaaacctgaacgcacggctgaggataacgaccgcctgcgcaaactcatg
ctcgagtggcagttccaaaagagactgcaggagtccaagcagaacgaggaggatgaggag
gaggaggatgacgaagatgtagacaccacgctaattatgcagagactggaggctgagaag
agagcacggctgcaggacgaggagcgacgacggaaacagcagttggaggaaatccgtaag
cgtgaggcagaagagcgagccaaacaggaggaggagagacgctggagagaggaggagaga
gccagacgagagaccgacgagaagaggagacaggaggaagattactacacccgcctggag
gcagagcggcgccggcagcacgaggaagccgagcgcaagctgctgacgccagacgagcct
ggtctgtacagacccccccttccccgggactaccagcccccttctcccgcaagcaccccc
gccactaacaacaacagcgcccctccgcccccgcctcagagaaacacctcctacctcaaa
acccaggtcgcctcccccgacaccatatacactgccaagtttgtctcatacaatgacgag
gaggaggaggaggaggatgaggaggacgcgggcctaacaggtcaggttaagctctcggcc
acccggaagtcctatggtgaccttccgccccccccaaagccccagccgccgccaaccgcg
cgcaagccccgtcccgtctcagatggcatctttctgtccaactcattccagctgcccgca
gcggccaatgccaacagtactgctcccaaggcagggcagccccctctccctcccaccaaa
cccagcttcatcccatcggccaactcgaaaggatttaattcatacactggaaacacaaca
ggactaggatcaggagagatttacaaagacccgcgagagaagtggacaaaaggcagcccc
gatcaggagaacacaataggaggagctccagaaaacctgacatttaaggagcgccagaga
ctcttctcacagggaaaggaagtgtcgaataaagtgaaagcctcccggaagctcatggaa
ctggagaacgaactgaacataaagcagtag
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integrated database retrieval system