Onychostoma macrolepis: 131527036
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Entry
131527036 CDS
T09350
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
omc
Onychostoma macrolepis
Pathway
omc00100
Steroid biosynthesis
omc01100
Metabolic pathways
Module
omc_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131527036 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
omc01006
]
131527036 (fdft1)
Enzymes [BR:
omc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131527036 (fdft1)
Prenyltransferases [BR:
omc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131527036 (fdft1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GBP_C
GST_C_8
Motif
Other DBs
NCBI-GeneID:
131527036
NCBI-ProteinID:
XP_058611839
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All DBs
Position
20:complement(30700828..30710050)
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AA seq
444 aa
AA seq
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MAGVGGKSAAPFSVIKRSLSLRSVLSGGRRSAQEGRLVTRSPHPLRTHRHPAYVCFSCQD
SMSETLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTMEDDMSIPLEKKV
PLLQDFHTFLYQPEWSFSESREKDRQVLEDFPTISVEFRNLGQQYRDVISDICHRMGVGM
AEFLEKKVSSMKEWDKYCHYVAGLVGIGLSRLFSASQLEDTEVGRDTELANSMGLFLQKT
NIIRDYLEDQQEGRAFWPQEAWSQFASRLEDLAHPQHLSSALSCLNLLVTDALHHVPDVI
EYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATNMGAV
QSIIAQYSQEILQKVSATDPSREKTLRILSLIHEKSLSPAALSSRAHHISPVYVSAAMLL
AALSWQYLNATAGQPPGGADMQGH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctggggtcggcggtaagagcgccgcgccgttctccgtgatcaagcgctcgttgtcg
ctgcgctcggtgctctccggcgggcggcgcagcgcgcaggaagggcggctggtgacccgt
tctcctcacccgctccggactcaccgacaccccgcttatgtgtgcttctcctgccaggac
tccatgagcgaaaccctgcggacctgctacgcgtatctgaaccagaccagccggagcttc
gcggcggtgatccaggccctggacggagagctgcggcatgcggtgtgtattttctacctg
gttctgcgagctctggacaccatggaggacgacatgagcatcccgctggagaagaaggtc
ccgttgctgcaggacttccacacgttcctctatcagccggagtggagcttcagcgagagc
agagagaaggaccggcaggtgctggaggatttccccacgatttcagtggagttcaggaat
ttgggccagcagtatcgtgatgtgatttcagacatttgtcaccggatgggtgtgggaatg
gccgaattcctggagaagaaggtttcctccatgaaagagtgggacaagtactgtcattat
gtggccggtctggtggggatcggtctgtcccgtctgttctcggcgtcccagctggaggac
actgaggtgggccgggacacggagctggcaaactccatgggtctgttcctccagaagacc
aacatcatcagggactatctggaggaccagcaggagggaagggccttctggccgcaggag
gcctggagtcagtttgcgtcgcgtctggaggatttggctcatcctcagcacctgagctct
gccctgtcctgcctcaacctgctggtgaccgatgctctccatcacgtcccagacgtcatc
gaatatctgtcccgcctccgcaaccagagcgtcttcaacttctgtgccattcctcaggtg
atggcgatagcgactctgtcggcgtgctacaacaatcctcaggtgtttcagggtgtggtg
aagatccggaagggtcaggcggtgacgctcatgatgcaggccacaaacatgggcgccgtc
cagagcatcattgcgcagtacagtcaggagatcctgcagaaggtgtccgccacggacccg
tcccgagagaagacgctgcgcatcctgagcctcatccatgagaagagcctgtctccagcc
gcgctctcgtcccgagcgcaccacatctctcccgtctacgtctcggccgccatgctgcta
gcggcgctcagctggcagtacctaaacgccacggccggccagccaccggggggcgccgac
atgcagggacactga
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