Onychostoma macrolepis: 131527314
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Entry
131527314 CDS
T09350
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
omc
Onychostoma macrolepis
Pathway
omc03320
PPAR signaling pathway
omc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
131527314 (rxrgb)
03320 PPAR signaling pathway
131527314 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131527314 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omc03310
]
131527314 (rxrgb)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
131527314 (rxrgb)
Nuclear receptors [BR:
omc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
131527314 (rxrgb)
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Ortholog
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GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
131527314
NCBI-ProteinID:
XP_058612320
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Position
20:21198604..21221053
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AA seq
477 aa
AA seq
DB search
MVDTLIAFMQSIAFKARLLCRNRCSLLLRRFPAGYNTRALNSPPSQPPPLSSMVGHPSVI
SSSRPLQSPLNTLGSSMNGLASPYSVIGPSLGSPSISLPSTPSMGFNTLSSPQMNCLNVN
SSEDIKPPPGLAPLSNMSSYQCSSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRT
IRKDLTYTCRDCKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKGDNEVES
TSSFNEDMPVDKILDAELAVEPKTETYTENSPGNSTNDPVTNICHAADKQLFTLVEWAKR
IPHFSDLPLDDQVILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSI
FNRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNPAEVEALREKVYASLETYTK
HKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggttgacactttaattgcgtttatgcaatcgatcgccttcaaagcacgcctgctgtgt
cggaatcgttgttcattgcttttgagacggtttccagccgggtataacactagggctctt
aattcacccccctctcagccgccacccttgagctccatggtgggtcatccgtccgtcatt
agttcgtcccgcccactgcagtcgcccttgaacaccttgggctcatccatgaatggcctg
gcctcaccctactcggtcatcggcccatctctgggttcaccgtccatttccttgccctct
actcccagtatgggctttaacactctcagcagcccacagatgaactgtttaaatgtgaat
agctcagaagacatcaagcctccaccaggattggctccgctgagcaacatgagcagctat
cagtgcagcagccctggatccctctccaaacacatctgtgccatttgtggagaccgatct
tcagggaagcactatggtgtttacagttgtgaaggttgcaaaggcttctttaagaggacc
atccgaaaagacctgacctacacgtgtcgagactgcaaagagtgcctgattgacaaacgc
cagcgcaaccgctgccaatattgccgctaccagaagtgcctggccatgggcatgaagcgg
gaagcggtccaggaagagaggcagcgtgggaaggagaaaggcgataatgaggtggaatca
actagcagttttaatgaagacatgcctgtggataagattctggatgcagaacttgcagta
gaacctaagactgagacatacacagagaacagtccaggcaactcgacaaatgacccagtc
actaatatctgccatgcagctgataaacaactgtttactctggtggagtgggccaagaga
atacctcatttctctgatcttcctctggatgatcaggtcattttgcttcgagcaggatgg
aacgagctcctcattgcctcattctctcatcgctcaatcacagttaaagatgggatcttg
ctgggcacaggcctccatgtccacaggagcagtgctcacagtgcaggtgtcggctccatt
tttaacagggtattgactgagctggtgtctaaaatgaaggatatgcagatggataagaca
gaactaggctgccttagagccattgtcctcttcaaccctgacgccaaaggcttgtccaac
ccagcggaggtagaggcactgagggagaaagtttacgcctcactggagacctacactaaa
cacaaataccctgagcagcctggcaggtttgctaaacttttgttgcgtcttcctgccctc
cgatccatcggactcaagtgtttggagcacctatttttctttaagctgattggagacaca
cccatagacactttcctaatggagatgctggaagcgccccatcagatcacgtga
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