Onychostoma macrolepis: 131527347
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Entry
131527347 CDS
T09350
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
omc
Onychostoma macrolepis
Pathway
omc04140
Autophagy - animal
omc04142
Lysosome biogenesis
omc04145
Phagocytosis
omc04148
Efferocytosis
omc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
131527347 (vps18)
04142 Lysosome biogenesis
131527347 (vps18)
04140 Autophagy - animal
131527347 (vps18)
04148 Efferocytosis
131527347 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131527347 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131527347 (vps18)
Membrane trafficking [BR:
omc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131527347 (vps18)
Hops complex
131527347 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
Lact-deh-memb
zf-RING_Vps41
aq_1631
zf_RING_Vps8
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-RING_11
KNOX2
STX17_N
DUF4446
DUF2175
zf_RING_Vps8_fungal
DUF1664
zf-RING_UBOX
LETM1_C
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
131527347
NCBI-ProteinID:
XP_058612363
LinkDB
All DBs
Position
20:complement(18090306..18096175)
Genome browser
AA seq
975 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEKINHL
SVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVYKLFLDPTGSHLVISLTTNE
CVYLNRNTQKVRSLSRWRGHLIDSIGWNKLIGSETNTGPILVGTSQGIIFEAEISASEGS
LFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLESKYFIVATTRKRLFQFVGKLAEGSE
QQGLSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSSPKTFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNSIKPISIVLTQFHFLLLLPDRVKSICTLNGQVVHEEKFF
PEKFGSLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRP
ECLDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIVLKFIEAKQEEALKEFLIKKLTN
LKPTEKTQITLLVTWLTELYLNRLGQLEADDGKQHLFLETREEFRTFLKISKHKDCFYNN
RNTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDDKLFYKFS
PVLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELDVK
DEAIHNYLLSLYAKHKPDALLWYLEQAGTHVSDIHYDLKYALRLCAEHGYLQACVLVYKI
MELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSS
CNLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNHHIEELKQEMEEATESAKRIREDIQE
MRNKYGVVESQEKCATCEFPLLNRPFYLFLCGHMFHYDCLLQEVIPHLSAYKQTKLEELQ
KKLAATTQTTKSRHRPKEEDTVSLGKGQGSREQIKSDIDDIIACECVYCGELMIKSIDKP
FIDPQKFDQEMSSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctattctggatcaatatgaagattctcagaacatccgtcaacacagccgtgtg
tcagcggccaacatcgggattactcattcagggtttgtgaatgtaaggttggaggaagag
aaacctattttcaacaagcagcgcatcgatttctcacctcctgaaaaaatcaaccactta
tcggtgtgcaacaaccagttatgcatgagtctggggaaagacaccctgctgagaattgat
cttggaaaacctgatcagccaaatcagattgaactgggaagaaaggatgatagcaaagtg
tacaaactttttctagatcctacagggtcacatttagtcatcagcctcaccacaaacgaa
tgtgtatacctaaaccgaaacactcaaaaggtccgaagtctgtcacgatggagaggccac
ctgattgatagcataggatggaacaaattaatcggctctgagaccaacactgggccgatt
ctggtcggcaccagccagggaatcatctttgaagcggagatctctgcctcagagggcagt
ctgttcaacactaacccagaccagtacttcagacaggttcattccctggaggaggatggt
aagccagctccggtttgttgcctcgaggtggaacgtggcttggaatccaagtacttcatt
gttgcgaccacacggaaacgcctgttccagtttgtaggaaagctggcagagggatccgag
cagcaggggctcagctccatctttgcccagaaccaggatctcctacccagcttccaggaa
tttccagtcaacatgggctacagtgagatcacattctatacatcaaagctgcgcagttcc
ccgaagacctttgcatggatgatgggaaatggggttttgtatggacagctggactatgtg
cggcccgactccctactcagtgatgttcaagtgtgggaatacacctcagacatcgattta
aactccatcaagcccatctctatagtactcacccagtttcacttcctgctcctgctccca
gaccgcgtcaagagtatttgcactctgaatggacaggtagtgcacgaagaaaagtttttt
ccggaaaagttcggcagtctaaaaaagatgatcaaagatccaatcactgggctcgtgtgg
atctacaccgagaaagctgtgtttcgctaccacatccagagggaggcacgggatgtttgg
cagatgtacatgaacatgaataaatttgacctggctaaagagtactgcaaagacagacca
gaatgcctagacatggtgctggccaaagaggcggagcactgcttccaaaacaagcgctac
ctggagagcgccaaatgctatgctctcactcagaattactttgaggagatcgtgctgaag
ttcatcgaggccaagcaggaggaggccttgaaagagtttctgattaagaaactgaccaac
ctcaagcccaccgagaagactcagatcaccctgctggtcacctggctgacagaactctat
ctgaaccggctcggtcaactggaggccgatgacggcaagcaacacctctttctggagacc
cgtgaagagttccgcacctttcttaaaatctccaaacataaagactgcttctacaacaat
cgcaacaccatctacgacctgctcgctagtcacggcgacgtggacaacatggtgtatttc
tcagtcatcatgcaagattatgagcgtgtcatatctcattactgccagcatgatgactac
agtgcagccttagatgttctctccaaacactgtgatgacaagctcttctacaagttctcc
ccggtcctcatgcagcacatccccaaaaaggtggtcgatgcatggattcaaatgggaaat
cggttggatccgaagaatctgatcccagcgctggtgaactacagccagatgggcagcatg
cagcagataaacgagaccatccggtacatggagttttgtgtgtatgagctggatgtcaaa
gatgaagccattcacaattacttactgtcgctttatgccaaacacaagccagacgctctg
ttgtggtacctcgaacaagcaggaacgcacgtctctgacatccactacgacttgaaatat
gccttgcgcctttgtgccgaacatggttacctgcaggcctgcgtcttggtttataagatt
atggagctgtatgaggaagctgtggatctagctttgcaagtggatgtagatttggccaag
tcttgcgccgaccttccagaggatgacgaggagttgaggaagaagctgtggctgaagatc
gctcgtcatgtggttcaggaggagaaagatgtcaagaaggccatgaactgtctgtccagt
tgcaaccttcttaagattgaggatatcttgcctttctttccagattttgttacgatagac
cacttcaaggaggcaatttgtaactccctggaagagtacaaccaccacatcgaggagctg
aagcaagaaatggaggaggccacagaaagtgccaaacgcatccgtgaagacatccaggag
atgaggaacaagtacggagtggttgagtctcaggaaaaatgtgccacttgcgaattcccc
ttgctcaacagacctttctatctcttcctgtgtggacacatgttccattatgattgcctc
ttacaggaagtcatccctcacctctctgcctataagcagactaaattagaggagcttcag
aagaagctggcagcgaccacgcagaccaccaaatccaggcacaggcccaaagaggaggat
acggtcagcttaggtaagggccaaggaagcagagagcagatcaagtctgacattgatgac
atcatagcgtgtgagtgtgtctactgtggtgagctgatgatcaaatccattgacaagcct
ttcatagatccacagaagtttgatcaagagatgtccagctggctctga
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