Onychostoma macrolepis: 131527683
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Entry
131527683 CDS
T09350
Symbol
cdc40
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131527683 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131527683 (cdc40)
Spliceosome [BR:
omc03041
]
Complex C
Other components
Step II factors
131527683 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
131527683
NCBI-ProteinID:
XP_058612925
LinkDB
All DBs
Position
20:30940464..30959182
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AA seq
578 aa
AA seq
DB search
MAAAAASLVSYGSDSDSENESESGTSPQKVDPDALAHLQPLKSGSITTIAVLNAAPEVAV
KEDVETGVHLDPALKEVTYNPTFETMFAPEFGPANPFRSQQMAAPRNMLSGFAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSNSYIGAVEEAEKNKGLTVFEAGAKKPEKRKKV
KGGEASDIDSFLGPWAKYQDEKDVAKPSEDEKKELDEIIAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHVPQDVGINLRSADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPMSG
HLLLSCSMDCKIKLWEVYNDRRCARTFIGHSKAVRDICXNNTGTQFLSAAYDRYLKLWDS
ETGQCIARFTNRKVPYCVKFNPDEDKQSLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctgcttccctcgtttcgtacggcagcgactcagattcggaaaacgag
tccgaatccggtaccagtccgcagaaagtcgacccagacgctctagctcatcttcagccg
ttaaaatccggtagcataacgacgatagccgtgctgaatgccgcgcctgaagtcgccgtg
aaggaagatgttgagaccggggttcatcttgatccagcactcaaagaagtcacttacaac
cctacatttgaaaccatgtttgctccagagtttggaccagcaaacccgttcagatcccag
cagatggccgccccgaggaacatgctgtctggtttcgccgaaccggctcatgtcaacgac
ttcatgtttgagcaacagaggagaacgttctctacgtttggttacgctctggacccgtct
gtggacaccagtcaggtctcgtccaacagctacattggagccgtagaagaagcagagaaa
aacaaagggctgacggtgtttgaggcgggagcgaagaagccggagaagaggaagaaggtg
aaaggtggagaagcgtcggacatcgacagcttcctcggaccctgggccaaataccaggat
gagaaagacgtggccaaaccctccgaggacgagaagaaagagctggacgagatcatagcc
aagagacagaagagaggcaagaatgaagaagaggctccagcggaggagaagaccatcctg
cacattaaagatgcgtacgattatcagggccgctcgtacctgcacgttcctcaggacgtg
ggcatcaacctgcgctcagcggacatcccagacaaatgctacctgcccaagaaacagctg
cacgtctggaccggacacaccaagggggtcagcgccatccgtctgttcccgatgtctggt
catctcctgctctcctgctccatggactgtaagatcaagttgtgggaggtttataacgac
aggagatgtgcgcggacgtttattggtcacagtaaagctgtgcgtgacatttgcnttaac
aacactggcacacagttcctgagcgccgcctacgacagatatctcaaactctgggactca
gagacgggtcagtgcatcgcccgcttcaccaacagaaaggttccctactgcgtgaagttc
aacccggatgaggacaagcagagcctgtttgtcgctgggatgtcggataagaagatcgtc
cagtgggatatccgctccggcgaggttgttcaggagtacgacagacacctcggcgccgtc
aacaccatcaccttcgtggacgagaaccggcgcttcgtcagcacctccgacgacaaaagc
ctgcgcgtctgggagtgggatattcctgtggacttcaagtacatcgctgagcccagtatg
cactcgatgcctgcggtcacgctctcgcccaacggtaagtggctggcctgtcagtccatg
gacaatcagatcctgatcttcggagcgcagaacagattccggctcaacaagaagaagatc
ttcaagggtcacatggtggcgggatacgcctgtcaggtggacttctctccagacatgagt
tacgtggtttccggcgatgctgacgggaagctgaatatctgggactggaagacgacgaag
ctctatcatcggatcaaggcgcatgataaggtgtgcatcagcgctctctggcatcctcac
gagacgtcgaaggtgatcacctgcggctgggacggtcagatcaagctctgggactga
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integrated database retrieval system
