Onychostoma macrolepis: 131528118
Help
Entry
131528118 CDS
T09350
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131528118
04121 Ubiquitin system [BR:
omc04121
]
131528118
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
131528118
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
131528118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_12
DBD_Tnp_Hermes
hAT-like_RNase-H
At4g08330
Motif
Other DBs
NCBI-GeneID:
131528118
NCBI-ProteinID:
XP_058613108
LinkDB
All DBs
Position
02:11360123..11362282
Genome browser
AA seq
610 aa
AA seq
DB search
MATPRHIEIEDPPVTFTSPVWANFGFPVDYNNGNRVIDKTRVVCRKCFTKVAHTTGNTSN
MQAHLRRHHPDIDISSTRKRPQKQETFPTAFRIKLQADSDRAQAITKAIGVFMALDMRPF
SVVENDGFTHLLRVLEPRYQLPSRPHFSQNVLPQLYNKVRAKLVEDLSNAKFIALTTDGW
TSRATQSFITITAHYITDNWVIANPVLQTRVVYESHTSDHLSEILQGAVAEWKIDRENAT
VPVTTDNAKNIVNAVKAAGFSPNIRCFAHTVNLASQRGMGVNQMSRLLGRVRKVVTFFHR
STTAAAVLKDKQEMLQLPTHKLIQDVPTRWNSSYDMLERYLEQQAAVFSALTDKNIKRNI
KDIVTLSDEDVKVAENIVQVLKPLKTVTALLSTEQLPTVSMIMPLKHTILESMNVSCTDT
AVVKDVKSAIVSDFTKRYSDSDSTLVQFLHMSTALDPRFKSLPFLEETTRSIVFNSLIEK
ILECHPSQAQASEEQSEVASSSDCDPPAKRAPIAELFGKLFPVETSTPASKSLSEMVKEE
VQRYKEMATLQVESNPLAWWKDKESQFPHLARLAKCFLGVPATSVPSERALQQGTLLQHR
EQASHLRMWT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccgcggcatattgagattgaagacccaccggtcacatttacgtctcctgtg
tgggcaaattttggttttccagtggactacaacaatggaaatcgtgtcatagacaaaacg
cgcgtcgtctgtcgtaagtgtttcacaaaagttgctcatacgacgggaaacacttctaac
atgcaagcgcatctccggagacatcatcccgacattgatatcagcagcacacgtaagaga
cctcaaaaacaggaaacttttcctactgcctttagaattaagctacaggccgactcagac
cgtgctcaagcaattaccaaggcgattggtgttttcatggcgctggatatgcgcccattt
tcagttgttgagaacgacggattcacgcatttgctacgtgtgttagagcccagatatcaa
ctaccgagccgaccgcattttagtcagaatgttttgcctcaactttacaacaaagtgaga
gccaaactggtggaggacctgagcaatgcaaaattcattgctttaactacagatgggtgg
acctcccgtgcaactcagtccttcatcacgatcacagcgcactatattaccgacaactgg
gtaattgcaaatcccgttctccagacacgcgtggtctatgaaagccatacaagtgatcat
ctgtcggaaatactacagggagctgtagctgagtggaaaattgacagagaaaacgcgact
gttcccgtcacaacagacaacgccaaaaatatagtgaatgcagttaaagcagccggattt
tcaccaaacattcgatgttttgcacacactgttaacctggcttcacaacgggggatgggc
gttaaccagatgtcacggcttttaggcagagtgagaaaagttgtcacttttttccatcga
agcactactgctgcagcagtgctcaaggacaaacaagagatgctccaactgcctacacac
aagctgatccaggatgtccccaccaggtggaactcaagctatgacatgcttgagcgctac
cttgaacagcaggctgctgttttctcagcacttacagacaagaatattaagaggaacatt
aaggacattgttactctgtctgatgaagatgtaaaagtagctgagaacattgttcaggtt
ctcaaaccactgaaaacggtaacagctctgttgagcactgaacagctgccaaccgtttca
atgataatgccactgaaacacaccatcctggaatctatgaacgtgagttgcacagataca
gcagttgtgaaagatgtcaaatctgccattgtgtccgacttcaccaaaagatactcagac
tctgactcaacacttgtgcagtttcttcatatgagtactgcacttgacccacgttttaaa
tctctgccgtttcttgaagagaccacacgcagcatcgtcttcaacagcctgatagagaag
attctggaatgccatccctcacaggcccaagcctcagaggagcagtcagaagtggcatcc
agcagtgattgtgatcctccagccaaaagagcaccaatcgcggaactgtttggaaagtta
tttccagtggagacgagcacacctgcatccaagtctctgtctgaaatggtgaaagaggag
gtgcagcgttacaaggaaatggcgactcttcaagtggagtcaaatccacttgcatggtgg
aaggacaaagagagccagtttccccatttagccaggttggctaaatgcttccttggagtc
cctgcaacatcagtccccagtgagcgggctctacagcaggggacattgttacagcacaga
gagcaagcctctcacctgagaatgtggacatga
DBGET
integrated database retrieval system
