Onychostoma macrolepis: 131528222
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Entry
131528222 CDS
T09350
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131528222 (rnf180b)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131528222 (rnf180b)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131528222 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
DUF5010
Motif
Other DBs
NCBI-GeneID:
131528222
NCBI-ProteinID:
XP_058613212
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All DBs
Position
21:16748999..16752885
Genome browser
AA seq
462 aa
AA seq
DB search
MATSFVTEEQDQSGTLEDPTSLRCRKCRRCLIDPTSLLKVVTSSETAATCNVWHLNVESL
PDWILASVDQASWTVGKLNCQNCGARLGGFNFVNCSKCSCRRDTTVHLSKSRVDQDLKPP
VLLTRLGRTREHTVRRKNEVESLPQTISSSPSPSSTLSFSCTVSHVASAETELEVESTEE
PQILESVERGIDVSLPSELPPQLSDDQESLEVRPVGSASQSRTSLDRAVNPEEVRLREME
EPSRNISPNLEPKLSKREKNHLKSLRRKQRKKERWIQRQQEAKDLAMKWDLTGSDDEERE
GYTCAVCLDVYYSPYKCHPCSHVFCEPCLRTLAKNRPSSTPCPLCRTLISHVLFQEELSQ
TTKACFPKVYRSRHDTFQKTNYSKWPLPNCPKRFRIFWGFQRHGGPASRWQFPHRAFGLD
ALDLGDMWGWPFDIDFVIISVYSLHWVMAFIIFCGLCYFLLL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcttttgtgactgaagaacaagatcaatcagggacactagaagatccaaca
agccttcgctgcagaaagtgccgtagatgtctaatagacccgaccagcctcctgaaggta
gtaacatcaagcgagactgcagccacatgcaatgtgtggcatttgaatgttgaatctttg
ccagattggattttggcaagtgttgatcaggccagttggacagtggggaaattaaactgt
cagaactgtggagctcgcttaggaggctttaattttgtaaattgctctaaatgctcctgt
agacgtgatacaactgtacatctcagtaagagtcgtgttgatcaggatctaaaaccacca
gttcttttgactagactaggaaggactagagaacataccgtgaggaggaagaatgaggtg
gagtctctccctcagacaataagctcatctccctctccttcctcaaccctcagcttctcc
tgtactgtgtcccatgttgcctctgctgaaactgaacttgaggttgagtcaactgaagaa
ccacagattcttgagagtgttgagagaggcatagatgtttccttaccttctgaattgcca
ccacagctgtctgatgatcaggagagcttagaggtacggcctgtgggttctgcttcccag
agtagaacctcgctggacagagctgtgaatccagaggaggtcagactcagagagatggag
gagccatcaagaaacatctcacccaacctagagccaaagctttccaagagagagaaaaac
cacctgaaaagcctaagaaggaagcagaggaagaaggagcgttggattcagagacagcag
gaggcaaaagatctggctatgaagtgggacctaacgggcagcgatgatgaagagagggag
ggatacacgtgtgccgtttgtttagacgtatattacagcccttacaagtgccatccttgc
agtcatgtgttctgtgagccctgtttgagaacactggctaagaacaggccaagcagtacc
ccgtgtcccctctgtaggaccctcatatcccatgtgctctttcaggaagagctcagtcaa
actacaaaggcttgcttcccaaaagtgtatcgctcaagacacgatacctttcagaagacc
aactattccaaatggcccctgcccaattgtccaaagcgtttccgcatcttttggggattt
cagaggcacggaggtcctgccagtcgctggcagtttccgcacagagcatttggcctggat
gcgttggatctgggagacatgtggggctggccatttgacattgactttgtgatcatctct
gtctactctctgcactgggtgatggcgttcatcatcttctgtggcctctgctacttcctc
ctcctctga
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