KEGG   Onychostoma macrolepis: 131528695
Entry
131528695         CDS       T09350                                 
Symbol
xndc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
omc  Onychostoma macrolepis
Pathway
omc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131528695 (xndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omc03400]
    131528695 (xndc1)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     131528695 (xndc1)
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2 Zn-C2H2_12 Rad50_zn_hook RAG1_imp_bd IBR_1
Other DBs
NCBI-GeneID: 131528695
NCBI-ProteinID: XP_058613996
LinkDB
Position
21:complement(11604390..11613318)
AA seq 407 aa
MSCVSAMAPIKIKHIVSFTSQDSKNGVNNLCEDSNSSRPWLCSVQDRSGVLRVELQMERV
SAVGFIDVGNCGSAFIQVDVGRSSWSLDHPYVTLLPTATLMSPADSKQGIGRQNVRMFKK
VDFLPQAAEESWDRLRVTCTQPFNKWSQFGLSFLRIRTMEDQAEDSSVQHEDIAVENLCT
PEKMTSVMEWLSSPAIQNTFFGRITGDVSSDRQRNAGSLSRAERMVKAAHSNRRSLSTSP
CSTTSSTTPPREDKLKTPPGGLSTSSDQINTPQEQRKKSKARQSLINSGAPRKRSRPTES
THKPSTTSPHRSAHQAPQGSPETRCPLCGESFSPDYLAFHASTCLDSDSAELMGVRETEV
MSSQYSSGADEHMVSCPLCSFRFPPDRIQQHASTCGDTVDPGTVWLN
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgagttgtgtttctgcgatggctcccatcaaaataaaacatatcgtctcgtttacatca
caggatagtaagaatggtgtgaataatctgtgtgaagacagtaacagcagcagaccgtgg
ttgtgcagcgtccaggaccgcagtggagtcctcagggtggaattacagatggagcgagta
tctgctgtaggattcattgatgttggcaactgtggctctgcgttcattcaggttgatgtc
ggccgctcctcctggtcattagaccatccttatgtcaccctgctgcccactgcaacactc
atgagtccagcggactcgaaacagggcattggccgtcaaaatgtgcgcatgtttaaaaaa
gttgattttctccctcaggctgctgaggagagctgggacagactgcgagtcacctgcact
cagcctttcaacaaatggtcacagtttggtctgtcctttctgcgcatccgcaccatggaa
gaccaggccgaagattcctcagtgcaacatgaagatattgctgttgaaaatctgtgcaca
ccagaaaagatgacatccgtgatggagtggctttccagtccagctatccaaaacacattt
tttgggcgaataacaggggatgtctcctcagatcgccaaaggaatgctgggagtttgagt
cgggcagagcgcatggtcaaagccgcccattctaacagacgctccttgtcaacatccccc
tgcagtactacatccagcacaacacctccgagagaagataagttgaaaaccccaccaggt
ggattgagcacttccagtgaccaaataaacacccctcaagagcaaaggaagaagtcaaag
gcacggcagagccttataaacagtggcgctcctcgaaagagatccagacctacagaatcc
acccataaacccagcacaacgagcccacacagaagtgcccaccaggctccacagggctct
cctgagacgagatgtcctctttgcggagaatccttcagtcctgattatctggctttccat
gcttccacctgcctggattctgattcagcggagctcatgggagtcagggaaacagaggtc
atgagctcacagtactcttctggcgcagatgagcatatggtttcatgtcctctttgctcc
ttccgattccccccagaccgtatccagcagcacgccagcacctgtggcgacacggtagac
ccaggtactgtgtggctgaactga

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