Onychostoma macrolepis: 131528772
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Entry
131528772 CDS
T09350
Symbol
nxf1b
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
omc
Onychostoma macrolepis
Pathway
omc03008
Ribosome biogenesis in eukaryotes
omc03013
Nucleocytoplasmic transport
omc03015
mRNA surveillance pathway
omc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131528772 (nxf1b)
03015 mRNA surveillance pathway
131528772 (nxf1b)
03008 Ribosome biogenesis in eukaryotes
131528772 (nxf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131528772 (nxf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131528772 (nxf1b)
03009 Ribosome biogenesis [BR:
omc03009
]
131528772 (nxf1b)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131528772 (nxf1b)
mRNA cycle factors
Stress granule specific factors
131528772 (nxf1b)
Ribosome biogenesis [BR:
omc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
131528772 (nxf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
LRR_9
LRR_4
Motif
Other DBs
NCBI-GeneID:
131528772
NCBI-ProteinID:
XP_058614118
LinkDB
All DBs
Position
21:13372448..13383462
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AA seq
642 aa
AA seq
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MATADDSRYYNEHDDRVGGPKHRNRKGRGPFRAPLYSDQISRPRHRGGHGGGGGGPGPRA
RLQDDDGDVTMAEGPQDSGAQRRFNPYGRPQNRRENRKGGRGGGGGGGGGGGGGNDGRGG
NRYGAGGGGGGGGPDGSRKNWFKMTIPFGKKYDKDWLLSSLQSVCSMPFHAVHYHTDGNK
AQFYIEDSTTANALFKVSRKITDKDGYKVTVIMNSCPPPALIHTDLKAADLEHLKQCMAK
RFDGSQQALDLNNIRVDPDLVSQNIEVTLNRRNSMLAVIKIIEENIPELICLNLSNNRLY
RLDDLVDIVNKVPNLKILNLSHNELKTERELDKLKGLKLAELSLEGNPLCGHYKNQADYV
SAVRERFPKLLKLDGHVLPPPIGFDLEVAPATLPPCKASYFCSEEIKNIILCFLQQYYSI
YDSGDRQPLLDAYHDGAAFSLSIPFTLQNASKSSLGEYQKDSRNIRRMKDDPTTRFRLIK
HTRLNVVAFLNELPKTQHDIASLIVDVNTYTATLLAFTVSGVFKENGKSRDSFRAFSRVF
IAVPAGNAGLCIVNDELFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLAAFSLK
SGMNLEWSQKCLQDNDWDFDRAAQIFTGLKAQGKIPDVAFVK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggacgactcgcgctactataatgagcatgatgaccgtgttggtggacca
aagcatcgtaaccgtaaaggcagaggccctttcagagcccccctgtacagtgatcagatt
tctcgaccgaggcatcgaggtggtcacggtggtggtggaggaggccctggtcctcgggcc
agacttcaggatgatgatggagatgtgaccatggcagaaggtcctcaagacagtggcgcc
cagcgcagattcaatccttatggccggccacagaatcggcgcgagaatcgcaaaggtgga
cgtggtggtggtggcggcggcggcggcggcggtggaggtggaaatgacggtagaggtggc
aatcgatatggagccggaggtggtggaggtggcggtggtcctgatggaagccgcaagaac
tggtttaaaatgactattcctttcgggaagaaatatgacaaagattggcttttgtcttcg
cttcagagtgtctgttccatgccattccatgctgttcattatcacactgatggcaacaag
gcccagttttatattgaagactccacaactgctaacgctttgtttaaagtgtcacggaaa
ataacggacaaagatggatataaggtgactgttattatgaacagctgcccaccacctgct
ttgattcacactgatctgaaggccgcagatttggagcatttgaagcaatgcatggctaaa
cgttttgatgggtcacagcaggctctggatctgaacaacatcagagtcgatccagatttg
gtttctcaaaatattgaggtcactttgaatcggaggaactccatgttggcggttatcaaa
ataatcgaggagaacattcctgagctgatttgtctgaacctaagcaacaaccggttgtac
aggctggatgacttggtggatattgtcaacaaagttcccaatttgaagattctcaatctg
tcacataatgagctgaagacagagagagagcttgataaactgaagggtctgaagctggcg
gagctctcgttggaaggaaatccgttatgtggacactacaagaaccaggccgactatgtc
agtgccgttcgggaacgattccccaagctgctcaaactggatggacatgtccttccgcct
cccattggttttgatttagaagttgctcctgcgactcttcccccctgcaaggctagctac
ttctgctctgaagaaatcaagaacatcatcctttgcttcctgcaacagtattacagcata
tatgactcaggagacagacagcccctgttagacgcctaccatgacggggcagctttctcc
ctcagcattcctttcaccctgcaaaacgcttcaaaaagtagtttaggggagtatcagaaa
gacagtcgcaatatcaggcgtatgaaagacgaccccactacacggtttcgtttgattaag
cacacacgattaaacgtggtggctttcctgaacgaacttcccaaaactcaacatgacatc
gcctccttgatcgtagatgtcaacacctacacagctacattgttggcatttacagtcagt
ggagttttcaaagagaatggcaaatcgcgagactcattcagagccttctcccgggtgttc
attgctgttcctgctggaaatgctggtctgtgcattgtgaatgatgagctctttgttcga
aatgccactacggaggaaattcgacgtgcgtttgttgccccagcccccacgccgtccagc
agccctgtgcccactctgtccgccccacaacaagaaatgcttgctgccttctccctaaag
tctggcatgaacctagaatggtctcagaagtgcctacaagacaacgattgggattttgac
agggctgctcagatcttcaccggccttaaggcacaaggaaagatcccagatgtcgcgttc
gtcaaataa
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