Onychostoma macrolepis: 131528940
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Entry
131528940 CDS
T09350
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
omc
Onychostoma macrolepis
Pathway
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131528940 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131528940 (vps8)
Membrane trafficking [BR:
omc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131528940 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_2
Beta-prop_WDR5
zf-RING_11
zf-RING_UBOX
Beta-prop_WDR3_1st
Beta-prop_THOC3
WDR55
ANAPC4_WD40
Beta-prop_HPS5
EIF3I
Beta-prop_EML_2
PHD_4
zf-C3HC4
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
131528940
NCBI-ProteinID:
XP_058614433
LinkDB
All DBs
Position
01:complement(25882777..26026732)
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AA seq
1412 aa
AA seq
DB search
MAESPDSRSLVSASSQLNLMEIEAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFILEDT
CLLNTENIDAHSCETSSLASSDSGDRTHLKRRRKAVETTATVHGSVLRRNVLKGISAQIV
SAADKVDAGLPTAITVSNVIAVGTSHGLALVFDQNQALRLCLGTTATGAEYGAVSALSIN
HDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDHPALAVCNDSGGSV
FELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAGPELRDHPITHYSLLAMASLTKILL
IGLKPSLKVWMTFPYGKTDPASVPLLAWQFVAVQKTINPVLAFCRGDTIHFLLVKKDESG
TIHVIKQRQLQLNCDLISLSWINPRTLVLMDSTEKLRVVDRPSQEELETVDMAELLLVYN
SSHFKSLATGGNVSQALALVGEKTCYQSVCSNAGQIMYLGTKSVHIMTLRNWRERVDHLL
KQEKFMEALSLAWSFHEGTAKAVLGLFADPAKRKGVVADKMVEILLQYVDRSLKKCPEQG
KIQVMEQHFQDMVPVMVDYCLLLQRTDLLFNQIYPRLVENSVARGVFLESLEPYILSERI
GCLTAPVMRDLLSYFQENGMMDSVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVFNS
GMNDYISPMEKLFQAIGPPLREGKPLTDEHVVMGNKMLVYISCCLAGRAYPLGDIPEDLV
PQVKNQVFEFLIRLHSVEAAQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALEY
QQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDD
DSRHTERQQVLLELLQVGGVVQFDEGHLLDLAEKAEFYQICEFMYDKKHIYDKIVDCYLK
DPLRKEELFNYIHNILSMPGYSSEEKQLVWVKALQHIKDLVSINSAKTAELVAVHFADKV
QSISTSLQDDYLVFQFLKCLLNPSSREGLNPQTVLKLGPDLHELLVDLLCQFSPQEVTTF
LKTSQDYRLEEAIQITEKHKLHEATAYLLEKKGDVQGAFEVLLQTLKGKLHKLALDGSEA
DKPDGEEQETGDEVLSLLQRVEEALHDIIALCQRSSHGLNQQQREALWFPLLEAMMSPQK
LLKGADTKHTSEALKELTMKVLNSMSSFIAPPAIIQRILQDPVYGRGKLAEIQGLILGML
ETFNYEQTLLETTTNLLNSDLHWSLSHLRKAVSRGLHPRQDHCNICLQQYKRRQESEEEI
IIFSCGHLYHCQCLQRKEVGILSERQYSWSCYKCTSNQGSRPADRPSSESSRSRSTSLAQ
TKVMSAHRGIVAEAHGRKMLTEATLDAQQTQAWDHFRTLYRGPSRLAVLTELTHSHGNER
AGLSNPVHLGTGSIYHSENFQLKLSPPPLVEE
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctccggacagtcgcagtcttgtttctgcgtcctcacagctcaatttaatg
gaaatagaggcgattgatgataaagagtttgacatccctcaagtggacacgcctccgacc
ctagagagcatcctgaacgagcctgaagacgaggatgagccattcattctggaggacact
tgtcttttgaacacagagaacattgatgcccactcgtgtgaaacctcatctctggccagc
tctgacagtggagaccgcacacatttaaagaggaggaggaaagcagtggaaactactgct
acagtacatggatctgtccttagacgcaatgtgctgaaaggcatctcagctcagatagta
tcagctgcagataaagttgatgctggcttgccaacggcaataactgtttcaaatgtgatc
gctgtagggacgtcacatggtctggccttagtatttgatcagaaccaagctctgcgtctc
tgtctgggcaccacagcgacaggagcggagtatggggcggtgtcagctctcagtattaat
cacgattgcacacgactgctgtgtggctttgccaaaggacagatcaccatgtgggatctg
gccaatgggaagctgctccgcactatcactgacgcccatccacctggcactgccatacta
catgtgaagttcactgaccacccggcactagccgtgtgtaatgacagtggcggatcagtg
tttgagctgtcattcagaagggtaatggggatgaggacatgtgaatccaggtgtttattc
agtggctctaaaggtgaggtttgctgtgttgagcctctacatgctggacctgaactgaga
gatcatcccattacccactactccctgctggccatggcctcactcaccaagattctgctg
ataggactgaagccttcactcaaagtgtggatgacttttccctacgggaagacggatcct
gcgagtgttcccttgttggcttggcagtttgtggcagtacagaaaacaatcaacccagtt
ctggctttctgtagaggagacaccatccacttcctgctggttaaaaaggacgagtctggc
accatccatgtcatcaaacagagacagcttcaactcaactgtgacctcatcagtctgagc
tggataaacccccgtacgcttgtgttaatggacagcacagagaagctgcgagtggtggac
agacccagtcaggaggagctggaaacagtggacatggccgagctgctgctggtttataac
agcagccattttaaatccctcgctaccggtggaaatgtcagccaagcactggctctagtt
ggagagaagacatgttaccagtctgtttgcagcaatgcaggccagatcatgtatctggga
acaaagtctgtgcacatcatgaccctgaggaactggcgtgagcgtgtggaccatctgttg
aagcaggagaagttcatggaggctctgtctcttgcctggtccttccacgagggcaccgcc
aaagctgtgctaggtctatttgcagaccctgctaagagaaaaggtgtggttgcagacaag
atggtggaaattttgttacagtatgtagatcgctctctgaaaaaatgtccagagcaaggg
aaaatccaggtgatggagcagcacttccaggacatggttcctgtcatggtggattattgt
ctccttctgcagagaacggacctactgtttaaccagatctaccctcggctagtggagaac
tcagtggccaggggtgtgtttctggagagtctggagccttacattctgagcgagaggatt
ggttgtctgactgcacccgtcatgagagacctccttagctacttccaggagaatggcatg
atggatagtgtggagggatgcctggtccatatggacatcaccaatctggacatacaacag
gtggtgcagatgtgctgggataaccagctgtatgatgccatgatctacgtcttcaacagt
ggcatgaacgactacatcagccccatggagaaactctttcaggcgattggtcctcctctc
cgtgaaggaaagcctctcacagatgagcatgttgtgatgggaaataaaatgctggtgtac
attagctgttgtttggcaggacgggcctatccgttaggtgacattcctgaagatctggtc
cctcaggtgaaaaaccaggtgtttgagtttctcattcgtctgcattcggtggaggctgca
caggaagaggaagtgtatccatacattcgaactcttctgcacttcgacactcgagagttc
ctcaacgtcctggcgctgacatttgaggacttcaagaatgacaaacaggctctggagtac
cagcaaaggattgtggacattttactaaaggttatggtggacaattctgacttcaccccg
tctcaagtcggctgtcttttcaccttccttgcacgacaacttgccaaacctgataatacc
ctctttgttaaccggaagctgtttgaccaggttctagagtttctatgtagtccagatgat
gactctagacatacagaaagacagcaggttctgctggagctgctgcaggttggtggcgtg
gtccagtttgatgaggggcatctccttgaccttgcagagaaggcagaattttatcagatc
tgcgagtttatgtatgacaaaaagcacatttacgacaaaattgttgactgctacctgaaa
gaccctttgagaaaggaggagctcttcaactacatccataacatcctatccatgccaggc
tacagctcagaggagaaacagttggtgtgggtcaaagcccttcaacacatcaaggatctg
gtcagcattaactcagctaagacagcagagcttgttgcagtgcactttgcagacaaggtg
cagtctatcagcacatctctgcaggacgactatttggtgttccagtttctgaagtgcctc
ctgaaccccagctccagagagggtctgaatcctcagactgtcttgaagttgggtccagat
cttcatgagctcttagtggacctactgtgccagttcagtcctcaggaagtcaccaccttc
cttaagacctctcaggattaccgactggaggaggccattcagatcacagagaaacacaag
ctgcatgaggcaactgcctacctgctggagaagaagggagatgtgcagggagcttttgaa
gtgctgctacagaccctgaagggcaaactccacaaacttgccctggatggctcagaggca
gacaagcccgatggtgaggagcaggagacaggtgatgaagtgctgagtctgttacaaaga
gtggaggaagctctgcatgacatcattgctttgtgtcagaggagctcgcacggcctcaac
cagcagcagagagaggcgttgtggtttcctctcctcgaggcgatgatgtcaccacagaaa
ctactcaaaggagccgacaccaaacacacttcagaggcattaaaagagctcactatgaaa
gtcttaaatagcatgtccagttttatcgccccaccagccatcattcagcgcatcctacag
gaccctgtgtatgggagaggaaagctggctgagattcagggactcattttggggatgcta
gaaaccttcaactatgaacagacgttgttggagactaccacaaatctgttgaactcagat
cttcactggtctctgtcacacctgcgtaaggctgtcagtagagggcttcacccaagacaa
gaccactgcaacatctgcttacagcagtacaagagacgccaggagagcgaggaggagatc
attatcttcagctgtggacacctgtaccactgccagtgtcttcagcgtaaagaggtgggc
attttgagcgagaggcagtactcgtggagctgctacaaatgcacatccaaccagggctca
cggccagcggacagacccagctcagagagctctcgatcacgctctacttctctggcacag
accaaagtgatgtctgctcatcgtgggattgtggcagaggctcatgggagaaagatgttg
actgaagccactctggatgcccagcagactcaggcctgggatcatttccgcactctctac
agaggaccatctaggcttgctgttctgacagaactcactcattctcatggcaatgagcga
gccggactgtcgaaccctgtccatctaggaacaggaagtatttatcacagcgagaatttc
cagctaaagctttctcctcctccactggtggaggagtag
DBGET
integrated database retrieval system
